Gcaud9562.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9562.t1
Unique NameGcaud9562.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length638
Homology
BLAST of Gcaud9562.t1 vs. uniprot
Match: A0A2V3J6J3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6J3_9FLOR)

HSP 1 Score: 440 bits (1131), Expect = 1.090e-142
Identity = 310/617 (50.24%), Postives = 403/617 (65.32%), Query Frame = 0
Query:    7 EDGDDSVNDIVDDAVDDGFFSRYRKDAENGRIFDVSDLDADAKEEFKSSKADQQTAARAFDAVDKLFGNINAKKDQNAFETSTSDERIDKNSWLNDIKARAATSGEKESAHAVDVHAVDES-ILGAAADEDDFSEAQVTSDLDEGEPFSDSQQPDNFLRTSRNRNSEKSSSDYSSGS----SFQKFMSFARRGPAPLQVEESRERDFRKEKSNRENPRRRSRPLSVSGVLNTTRSFDRNYKDTYEPDHNGMEAEVEDGTSLSRRRNERRQLFTAVRRIGGKTRRILSPPREWEAIDSDDVGHIRSDSRVFGDRF-RPSHLRNAVADCVACRGSGTETCSLCIGSGWVAPKKEFAPSDSEERKALYEEFWSTPDLVIDSQGCAQCIRCHGIGKQFCVTCKGSGSALEKGFNFNERYEVFDMFPNVSDDAVVENDYDQDDFEDEXXXXXXXXXXXXXXXXXXXXXXXTGKGRKDDSDDKL-EDEDVVLGVGDXXXXXXXXXXXXXXXXXXXXXXXXXXDEVADESEELLAALEAMDLRDSKRDDRMSGVLSQLEKNSELLEEEXXXXXXXDLDFEVEDXFEEESVDTESLFELEL--DEFADAVDDEGADESVD-EGYA 613
            ED D++  DI DDAVDDGFFSRY K+AENGR+F+VS LDA+ +EEFKSS  D QTAARAFDAVD+LFG+INA+KD+ A  +ST+D++ DK+SWL+DIKARAATSGE+++A AVDV AVDES  L     +DDF+EA ++ D            P  + R S+++N EK S+  + GS    +FQ FM+FAR+GP   + E++RE         RE+ R R R    S VLN  R  +R+  D YEP  + MEAE+E G S  +RR+ RRQ +TAVRR+GG+TRRIL+PP EW+ +D D+VG +RS++R  G R  R S L+  +ADC +CRG+GTETC++C+GSGWVAP  E +  +   R+ L EEFWS P+LV+D  G AQC+RC+GIGKQFC +C+GSGSAL KGF+ +ERYEVFDMFP+VSDDAVV+ D +       XXXXXX                 TGKGR    + KL ED+D VL VGD          XXXXXXXXXXXXXXXX           A LE+MDL + K   R  G+ ++LEK+  LLE++     XX      E X   ES + + L++LEL  DE+ D  ++  +D  +D EG A
Sbjct:   80 EDEDETDQDI-DDAVDDGFFSRYVKEAENGRVFNVSKLDAEPREEFKSSNLDHQTAARAFDAVDRLFGSINAQKDKGASGSSTTDDKFDKSSWLDDIKARAATSGERDTAAAVDVQAVDESQSLDERVMDDDFAEAGISPD------------PSEYSR-SKSQNREKGSARGNEGSEHSSTFQTFMNFARKGPTTDREEDTREXXXXXXXXAREDIRGRPRRPPPSSVLNLGRFGERDSTDNYEPLDDEMEAEIEFG-SKPKRRSGRRQRYTAVRRVGGRTRRILNPPLEWQPMDQDEVGQVRSENRPLGGRGPRKSQLQGVIADCQSCRGAGTETCAICLGSGWVAPLNEPSGKEKTGRRELLEEFWSRPNLVVDIHGNAQCVRCNGIGKQFCGSCQGSGSALRKGFSLSERYEVFDMFPSVSDDAVVDGDEEYXXXXXXXXXXXXFESFQLYQGSADLFNLSTGKGRTGGEESKLQEDDDDVLDVGDDEDAVVMNVEXXXXXXXXXXXXXXXX----------XAGLESMDLGEEKGRTRGEGMFTELEKSEGLLEDDDDIDEXXXXXXXXEYX---ESDEGDGLYDLELEEDEYDDGFEEGSSDVGLDPEGVA 668          
BLAST of Gcaud9562.t1 vs. uniprot
Match: R7QUL0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUL0_CHOCR)

HSP 1 Score: 172 bits (435), Expect = 3.120e-43
Identity = 96/223 (43.05%), Postives = 136/223 (60.99%), Query Frame = 0
Query:  221 RSRPLS-VSGVLNTTRSFDRNYKDT-YEPDHNGMEA---EVEDGTSLS----RRRNERRQLFTAVRRIGGKTRRILSPPREWEAIDSDDVGHIRSDSR-VFGDRFRPSHLRNAVADCVACRGSGTETCSLCIGSGWVAPKKEFAPSDSEERKALYEEFWSTPDLVIDSQGCAQCIRCHGIGKQFCVTCKGSGSALEKGFNFNERYEVFDMFPNVSDDAVVEND 433
            R+ P S +S +L  T+  D    D   E D +  EA   E+E+  S+     R+ + RRQ FTAVRR+  ++ +I  PP EW+ +  +++  +RSD R + G R   S  +  VA+C  CRGSG +TCS C+GSGWV P  +   S+S  RK L E+ W+ P+L +D+ G AQCI C+GIGKQFC +CKGSGSAL KGF+ +E+ E+FD      DD+ +  D
Sbjct:   59 RAPPASNISRILGLTKQIDSRRADAPREKDDDSYEALDDEMEESISIRGDAVRKGSLRRQKFTAVRRVANRSFKIHKPPDEWKPMTEEEIAKVRSDGRSIGGGRVGSSKGKGIVANCQTCRGSGLDTCSACLGSGWVPPLDKIGMSES--RKELLEKIWNRPNLCVDNYGEAQCILCNGIGKQFCDSCKGSGSALRKGFSLSEKREIFDFDDPEEDDSCLGED 279          
The following BLAST results are available for this feature:
BLAST of Gcaud9562.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6J3_9FLOR1.090e-14250.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QUL0_CHOCR3.120e-4343.05Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 547..567
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..637
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 555..637
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 528..546

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_388_length_27163_cov_4.403295contigNODE_388_length_27163_cov_4.403295:10629..12542 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9562.t1Gcaud9562.t1Gracilaria caudata M_176_S67 malemRNANODE_388_length_27163_cov_4.403295 10629..12542 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9562.t1 ID=Gcaud9562.t1|Name=Gcaud9562.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=638bp
MDAAEGEDGDDSVNDIVDDAVDDGFFSRYRKDAENGRIFDVSDLDADAKE
EFKSSKADQQTAARAFDAVDKLFGNINAKKDQNAFETSTSDERIDKNSWL
NDIKARAATSGEKESAHAVDVHAVDESILGAAADEDDFSEAQVTSDLDEG
EPFSDSQQPDNFLRTSRNRNSEKSSSDYSSGSSFQKFMSFARRGPAPLQV
EESRERDFRKEKSNRENPRRRSRPLSVSGVLNTTRSFDRNYKDTYEPDHN
GMEAEVEDGTSLSRRRNERRQLFTAVRRIGGKTRRILSPPREWEAIDSDD
VGHIRSDSRVFGDRFRPSHLRNAVADCVACRGSGTETCSLCIGSGWVAPK
KEFAPSDSEERKALYEEFWSTPDLVIDSQGCAQCIRCHGIGKQFCVTCKG
SGSALEKGFNFNERYEVFDMFPNVSDDAVVENDYDQDDFEDEDEVQDDFE
SFQLYQGSVDAFDLSTGKGRKDDSDDKLEDEDVVLGVGDDDDEVLSVEDE
DAEDLNVDENDDDDMDEVADESEELLAALEAMDLRDSKRDDRMSGVLSQL
EKNSELLEEEEDDEDEEDLDFEVEDEFEEESVDTESLFELELDEFADAVD
DEGADESVDEGYAFEDDEVEDEDEEEDEEEGEEEEEL*
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