Gcaud9544.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9544.t1
Unique NameGcaud9544.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length265
Homology
BLAST of Gcaud9544.t1 vs. uniprot
Match: A0A2V3IDX9_9FLOR (SCP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDX9_9FLOR)

HSP 1 Score: 248 bits (633), Expect = 2.210e-79
Identity = 150/267 (56.18%), Postives = 175/267 (65.54%), Query Frame = 0
Query:    1 MAIFKLLLAFLLATSALAFPCRTTGGTVIYPYAYFTSNPTRSRNAKLVIGSAPEASSEAE---EEEMGATPAPVQAMETTTMPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTMPSSMGTGDSMPPNDSSAKQICVACAKENFDEVNRYRASLGLSQLTWNDKMAAEAAAHSKDMFERDYFEHSDLPYWENIAYNWGSNKWDDIAGGFFTQWKNSPGHDANMKRDTHLCGGVGIYGDGNKFYGTQVFTNRC 264
            M++ KLL A LL  +A AFPCRT  G +IYPY YF S+P R          +P +S++AE   E E   +P   + M   TMPP   XXXXXXXXXXXXXXXX                       T   P   G+   MPPNDSS K+IC+ CAK+NF +VN YRAS GLSQLTWNDKMAAEAAAHSKDMFER+YFEHSDLPYWENIA+      W+ ++ GFF QW+ S GHD NM+  TH CGGVGIYGDG+KFYGTQVF+NRC
Sbjct:    1 MSLLKLLFASLLLATAYAFPCRTMSGDIIYPYTYFKSDPMRRGRR------SPRSSADAEATSEPEPALSP---EEMTPVTMPPTTAXXXXXXXXXXXXXXXXM----------------------TEPEPQPSGSSPMMPPNDSSKKEICIPCAKDNFRKVNAYRASRGLSQLTWNDKMAAEAAAHSKDMFERNYFEHSDLPYWENIAWALNRYGWNSVSEGFFEQWRKSSGHDKNMRTPTHKCGGVGIYGDGSKFYGTQVFSNRC 236          
BLAST of Gcaud9544.t1 vs. uniprot
Match: A0A348Z225_CLOSP (SCP domain-containing protein n=2 Tax=Clostridium TaxID=1485 RepID=A0A348Z225_CLOSP)

HSP 1 Score: 77.4 bits (189), Expect = 5.360e-13
Identity = 50/153 (32.68%), Postives = 74/153 (48.37%), Query Frame = 0
Query:  125 TTMPSSMGTGDSMPPNDSSAKQICVACAKENFDEVNRYRASLGLSQLTWNDKMAAEAAAHSKDMFERDYFEHSDLP-----------------YWENIAYNWGSNKWDDIAGGFFTQWKNSPGHDANMKRDTHLCGGVGIYGDGNKFYGTQVF 260
            +T P++  TGD      S  +Q+        F +VN  RA  G+S L+++  M   A   SKDM +++YF+H +L                  + ENIAY  G +  +++A  F T W NS GH  N+        GVG+Y  GN++Y TQ F
Sbjct:  145 STTPTTTVTGDF----SSQIEQLI-------FTKVNEERARAGMSTLSYSSLMEKYARIKSKDMGDKNYFDHRNLEGELITAQMASDGISYRSWGENIAYIGGVSDINELANQFMTNWMNSQGHRENILSPNFTSIGVGVYKAGNRYYATQEF 286          
BLAST of Gcaud9544.t1 vs. uniprot
Match: A0A6P2ADB1_9CHRO (CAP domain-containing protein n=1 Tax=Gloeocapsa sp. DLM2.Bin57 TaxID=2480214 RepID=A0A6P2ADB1_9CHRO)

HSP 1 Score: 70.5 bits (171), Expect = 1.650e-11
Identity = 49/120 (40.83%), Postives = 66/120 (55.00%), Query Frame = 0
Query:  157 DEVNRYRASLGLSQLTWNDKMAAEAAAHSKDM------FERDYFEH------SDLPYW---ENIAYNWGSNKWDDIAGGFFTQWKNSPGHDANMKRDTHLCGGVGIYGDG-NKFYGTQVF 260
            ++VN+YRASLGL+ L  N+ ++  A  HS+DM      F  D FE       S +PY    EN+AYN G   +DD        W +SPGH  NM  D +L G VG+  D  +K+Y TQ+F
Sbjct:   28 EQVNQYRASLGLNSLELNEDISNAARVHSQDMAGGIVPFSHDGFEQRVEVISSTIPYRRVAENVAYNQG---YDDPVTVAVEGWIDSPGHQQNMVGDFNLTG-VGVAKDDEDKYYFTQIF 143          
BLAST of Gcaud9544.t1 vs. uniprot
Match: A0A7V6E0A1_9BACT (CAP domain-containing protein n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A7V6E0A1_9BACT)

HSP 1 Score: 71.6 bits (174), Expect = 2.960e-11
Identity = 47/123 (38.21%), Postives = 61/123 (49.59%), Query Frame = 0
Query:  156 FDEVNRYRASLGLSQLTWNDKMAAEAAAHSKDMFERDYFEHSD-----------------LPYWENIAYNWGSNKWDDIAGGFFTQWKNSPGHDANMKRDTHLCGGVGIYGDGNKFYGTQVFT 261
            F+ +N  RA  GLS L  + ++   A  HS+DM+ RD+F+H++                 +   ENIA N G     D      T   NSPGH AN+   T    GVGI GDG+KFY TQVF 
Sbjct:   69 FNLLNSARADEGLSALAHHAELRLVAREHSEDMYRRDFFDHTNPDGQTPQDRVENAGISIITGAENIAMNTGHT---DPVQEAHTGLMNSPGHYANIMNSTFNTVGVGIAGDGDKFYFTQVFA 188          
BLAST of Gcaud9544.t1 vs. uniprot
Match: A0A7Y3BKP4_9BACT (CAP domain-containing protein n=1 Tax=Ignavibacteriaceae bacterium TaxID=2651163 RepID=A0A7Y3BKP4_9BACT)

HSP 1 Score: 66.2 bits (160), Expect = 7.500e-10
Identity = 43/116 (37.07%), Postives = 59/116 (50.86%), Query Frame = 0
Query:  159 VNRYRASLGLSQLTWNDKMAAEAAAHSKDMFERDYFEHSDL-----PYWENIAYNWGSNKWDDIAGGFFTQ-----WKNSPGHDANMKRDTHLCGGVGIYGDGNK-FYGTQVFTNR 263
            VN +R S+GLS+L WN+ +AAE   HS DM       H           E I  NW     +++A    TQ     W NSPGH +N++ +++L G VGI  D +   Y TQ+F  R
Sbjct:   46 VNLHRTSMGLSELEWNEVIAAECRTHSIDMANNGTINHDGFYERIDRIKEKIPVNWAG---ENVALXXXTQAAVTSWLNSPGHKSNIESNSNLTG-VGIAFDADSAMYLTQIFVRR 157          
BLAST of Gcaud9544.t1 vs. uniprot
Match: K9WWP7_9NOST (Uncharacterized protein with SCP/PR1 domains n=1 Tax=Cylindrospermum stagnale PCC 7417 TaxID=56107 RepID=K9WWP7_9NOST)

HSP 1 Score: 66.2 bits (160), Expect = 1.090e-9
Identity = 49/119 (41.18%), Postives = 65/119 (54.62%), Query Frame = 0
Query:  156 FDEVNRYRASLGLSQLTWNDKMAAEAAAHSKDMFERDY-FEHSD---------LPYW---ENIAYNWGSNKWDDIAGGFFTQWKNSPGHDANMKRDTHLCG-GVGIYGDGNKFYGTQVF 260
            F ++N+YRASLGL  LT N  + ++A  HS++M +    F H+          +PY    ENIAYN GS+   D A      W NSPGH AN+K + +L G GV     G K Y TQ+F
Sbjct:   59 FQQINQYRASLGLPALTRNSAIDSQARNHSQNMAKGTVPFGHNGFQQRVQAIAIPYSAVAENIAYNQGSS---DPATQAVKSWLNSPGHLANIKGNYNLTGIGVASNSQG-KIYFTQIF 173          
BLAST of Gcaud9544.t1 vs. uniprot
Match: A0A6J4TNT9_9CHLR (SCP domain-containing protein n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4TNT9_9CHLR)

HSP 1 Score: 66.6 bits (161), Expect = 1.100e-9
Identity = 45/136 (33.09%), Postives = 64/136 (47.06%), Query Frame = 0
Query:  123 TTTTMPSSMGTGDSMPPNDSSAKQICVACAKENFDEVNRYRASLGLSQLTWNDKMAAEAAAHSKDMFERDYFEHS---DLPYWENI---AYNWGSNKWDDIAGG------FFTQWKNSPGHDANMKRDTHLCGGVG 246
            T    P   G G +  P  S+ +  C    K     +N YRA+ GL  L     + A A  HS +M  R+YF H+   D+ + +NI    Y + + + ++IA G       F QWKNSPGH+ANM        G+G
Sbjct:   35 TAVAAPRGGGAGPTTAPI-SATQYRCDVEEKAFLKLINNYRATKGLKALRLTKTLGAAADHHSVEMATRNYFSHTLAGDVTWSQNIKNHGYTYNTYRGENIAAGNSTALATFNQWKNSPGHNANMLSPNFNAIGIG 169          
BLAST of Gcaud9544.t1 vs. uniprot
Match: A0A6J4UA50_9CHLR (CBM32 n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4UA50_9CHLR)

HSP 1 Score: 67.8 bits (164), Expect = 1.770e-9
Identity = 42/117 (35.90%), Postives = 60/117 (51.28%), Query Frame = 0
Query:  159 VNRYRASLGLSQLTWNDKMAAEAAAHSKDMFERDYFEHSDLP----YWENIA---YNWGSNKWDDIAGG------FFTQWKNSPGHDANMKRDTHLCGGVGIYGDGNKFYGTQVFTN 262
            +N YRAS GL  L    +++A A  HS+ M   +YF H+  P    + +N+A   YN+ + K ++I  G       F  WKNSPGHDANM+   +   G+G   + N  Y     TN
Sbjct:   56 INNYRASFGLGALVITQQLSAAADHHSQSMANFNYFSHTLTPEGISWSQNMANHGYNYNAWKGENIYAGQSGALAAFNAWKNSPGHDANMRNVNYKAIGIGRAYNANSTYKWYWTTN 172          
BLAST of Gcaud9544.t1 vs. uniprot
Match: A0A3S1CS85_9CYAN (SCP domain-containing protein n=4 Tax=Calotrichaceae TaxID=2661849 RepID=A0A3S1CS85_9CYAN)

HSP 1 Score: 62.8 bits (151), Expect = 2.010e-8
Identity = 45/122 (36.89%), Postives = 67/122 (54.92%), Query Frame = 0
Query:  153 KENFDEVNRYRASLGLSQLTWNDKMAAEAAAHSKDM------FERDYFEH----SDLPYW---ENIAYNWGSNKWDDIAGGFFTQWKNSPGHDANMKRDTHLCG-GVGIYGDGNKFYGTQVF 260
            K  F+++NRYRAS GLS+LT N +++ +A  HS++M      F  + FE     + + Y    EN+A+N G   +DD        W  SPGH  N+K + +L G GV    +G + Y TQ+F
Sbjct:   58 KSVFEQINRYRASKGLSRLTLNSRISKQARVHSQNMASGKVPFSHNGFEKRVKSTAVRYQSAAENVAFNQG---YDDPVAEAIRGWIKSPGHLKNLKGNYNLTGIGVATNKEG-QVYLTQIF 175          
BLAST of Gcaud9544.t1 vs. uniprot
Match: UPI0018AA8D8E (CAP domain-containing protein n=1 Tax=Clostridium sp. 1001270J_160509_D11 TaxID=2787103 RepID=UPI0018AA8D8E)

HSP 1 Score: 61.6 bits (148), Expect = 1.240e-7
Identity = 46/139 (33.09%), Postives = 66/139 (47.48%), Query Frame = 0
Query:  140 NDSSAKQICVACAKENFDEVNRYRASLGLSQLTWNDKMAAEAAAHSKDMFERDYFEHSDLPYWE--------NIAYNWGSNKWDDIAGG------FFTQWKNSPGHDANMKRDTHLCGGVGIY-GDGNKFYGTQVFTNR 263
            +D S +Q+      E  + VN+ RA+ GL  LT N +++  A   SKDM +++YF+H+   Y          NI+Y       ++IA G        T W NS GH AN+        GVGIY G     Y TQ+F  +
Sbjct:  113 SDFSKEQV------EVLNLVNKERAAQGLKPLTLNKELSRVATLKSKDMNDKNYFDHTSPTYGSPFDMMKTFNISYKAAG---ENIAMGQRTPSEVMTDWMNSSGHRANILNSNFTELGVGIYKGANGTIYWTQMFIGK 242          
The following BLAST results are available for this feature:
BLAST of Gcaud9544.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IDX9_9FLOR2.210e-7956.18SCP domain-containing protein n=1 Tax=Gracilariops... [more]
A0A348Z225_CLOSP5.360e-1332.68SCP domain-containing protein n=2 Tax=Clostridium ... [more]
A0A6P2ADB1_9CHRO1.650e-1140.83CAP domain-containing protein n=1 Tax=Gloeocapsa s... [more]
A0A7V6E0A1_9BACT2.960e-1138.21CAP domain-containing protein n=1 Tax=candidate di... [more]
A0A7Y3BKP4_9BACT7.500e-1037.07CAP domain-containing protein n=1 Tax=Ignavibacter... [more]
K9WWP7_9NOST1.090e-941.18Uncharacterized protein with SCP/PR1 domains n=1 T... [more]
A0A6J4TNT9_9CHLR1.100e-933.09SCP domain-containing protein n=1 Tax=uncultured T... [more]
A0A6J4UA50_9CHLR1.770e-935.90CBM32 n=1 Tax=uncultured Thermomicrobiales bacteri... [more]
A0A3S1CS85_9CYAN2.010e-836.89SCP domain-containing protein n=4 Tax=Calotrichace... [more]
UPI0018AA8D8E1.240e-733.09CAP domain-containing protein n=1 Tax=Clostridium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 35..261
e-value: 2.7E-24
score: 88.3
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 153..260
IPR014044CAP domainPFAMPF00188CAPcoord: 156..259
e-value: 5.4E-13
score: 49.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..122
NoneNo IPR availablePANTHERPTHR31157UNCHARACTERIZEDcoord: 150..262
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..264
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availableCDDcd05379CAP_bacterialcoord: 152..260
e-value: 6.65743E-21
score: 83.5833

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1607_length_9526_cov_3.721569contigNODE_1607_length_9526_cov_3.721569:2640..3434 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9544.t1Gcaud9544.t1Gracilaria caudata M_176_S67 malemRNANODE_1607_length_9526_cov_3.721569 2640..3434 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9544.t1 ID=Gcaud9544.t1|Name=Gcaud9544.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=265bp
MAIFKLLLAFLLATSALAFPCRTTGGTVIYPYAYFTSNPTRSRNAKLVIG
SAPEASSEAEEEEMGATPAPVQAMETTTMPPATRPPTTRPPTTRPPTTRR
PTTRPPTTMPPTTMPPTTMPPTTTTTMPSSMGTGDSMPPNDSSAKQICVA
CAKENFDEVNRYRASLGLSQLTWNDKMAAEAAAHSKDMFERDYFEHSDLP
YWENIAYNWGSNKWDDIAGGFFTQWKNSPGHDANMKRDTHLCGGVGIYGD
GNKFYGTQVFTNRC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035940CAP_sf
IPR014044CAP_domain