Gcaud9539.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9539.t1
Unique NameGcaud9539.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length533
Homology
BLAST of Gcaud9539.t1 vs. uniprot
Match: A0A2V3J331_9FLOR (DNA polymerase delta small subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J331_9FLOR)

HSP 1 Score: 655 bits (1690), Expect = 1.870e-231
Identity = 324/481 (67.36%), Postives = 387/481 (80.46%), Query Frame = 0
Query:    2 SNGENGAHAVERRAVVIDTTPSQRFLLPPKKKYEPQYAHIYFCRLCALRPALQAAAQDNFGSPSQKLRYAKRIVNVSSENAQDVETVIIGVVFREMSKPSILALYEQPGHDLIPSPPPRSWSPYPGSNDSIFLEDENGRCTLDISALDPMPDSFVTGFVVAVKGAEDRATGTFKVSGFSSVLPAPQKTLKPLSDDSYICLLSSLSVSSPSFGLELLLEFLKGNTLEEDETFQKNIVSVVIAGNLIPRVDATPMHKPLAVGDKERIASPMVDADRFLSGLAATVPVFHMPGENDATNYLLPQQPLHRCLLPSSSRNSNFKRVPNPFACELGGRLVLATSGQNVSDFALYQAQCNEESKEETLSLKE---KEKRFEPSGVRVTDILECMLNNRHIAPTCPDTLGSYPFYEKDPFTIENTPHIFVAGNQKEFGTRTMNVPREASQDSNEQMDIDGELGGSVRLVSVPRFDTTGQAVFVNLRNMD 479
            SNGENG HA  R+ + ID  PS+RF+LP KK+YEPQYAHIYFCRL ALRPAL++ A+  FG PS KL +AKRIVNVSSE A + ETVIIGVVFR+M+KPSILALYEQ  HDLIP+PPPR+ +PYPG++D++FLEDENGRCTLD+S  D +PD+FVTGFVVAVKG ED   GTFKV  F+ VL APQ TLKP  +D+YIC++SSL +  PSFG+ELL EFLKGNTLEEDE F  N V++VI GN+I  V  TP H+PLAVG+KERIASPMVDADRFLSG+A+T+PVF+MPGE+DATNYLLPQQ ++RCLLPS+SRNSNF RVPNP  CE+ GR +LATSGQNV DFALY A+  ++ + +   L+     +  +E  G RV +I+  ML NRHIAPTCPDTLGSYPFYE+DPF IE TPHIFV GNQKEFG R + V  E SQ S+E M ++GE+ G+V LVS PRFD +GQAVFVNLRNM+
Sbjct:   12 SNGENGNHAKVRKTIPIDLEPSKRFVLPSKKRYEPQYAHIYFCRLTALRPALESTARVIFGPPSDKLHHAKRIVNVSSEGANERETVIIGVVFRQMTKPSILALYEQASHDLIPAPPPRATAPYPGADDTVFLEDENGRCTLDMSGFDQIPDAFVTGFVVAVKGKEDHLKGTFKVGSFTPVLAAPQPTLKPYEEDAYICIVSSLCLPQPSFGVELLGEFLKGNTLEEDEAFAMNTVALVITGNVIGHVSDTPTHQPLAVGEKERIASPMVDADRFLSGVASTLPVFYMPGEHDATNYLLPQQAVNRCLLPSASRNSNFHRVPNPLLCEMAGRSLLATSGQNVEDFALYAAESAKDQQNDNQMLERDPVNKGMYEADGERVLEIMGNMLKNRHIAPTCPDTLGSYPFYERDPFVIERTPHIFVVGNQKEFGARRIRVSTEGSQSSDEGMIVEGEICGTVCLVSAPRFDKSGQAVFVNLRNME 492          
BLAST of Gcaud9539.t1 vs. uniprot
Match: R7Q512_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q512_CHOCR)

HSP 1 Score: 461 bits (1186), Expect = 5.400e-155
Identity = 250/497 (50.30%), Postives = 337/497 (67.81%), Query Frame = 0
Query:    3 NGENGAHAVERRAVVIDTTPSQRFLLPPKKKYEPQYAHIYFCRLCALRPALQAAAQDNFGSPSQ-KLRYAKRIVNVSSENAQDVETVIIGVVFREM-SKPSILALYEQPGHDLIPSPPPRSWSPYPGSNDSIFLEDENGRCTLDISALDPMPD--SFVTGFVVAVKGAEDRATGTFKVSGFSSVLPAPQKTLKPLSDDSYICLLSSLSVSSPS---FGLELLLEFLKGNTLEEDE-TFQKNIVSVVIAGNLIPRVDATPM--------HKPLAVGDKERIASPMVDADRFLSGLAATVPVFHMPGENDATNYLLPQQPLHRCLLPSSSRNSNFKRVPNPFACELGGRLVLATSGQNVSDFALYQAQCNEESKEETLSLKEKEKRFEPSGVRVTDILECMLNNRHIAPTCPDTLGSYPFYE-KDPFTIENTPHIFVAGNQKEFGTRTMNVPREASQ-DSNEQMDIDGELGG--SVRLVSVPRFDTTGQAVFVNLRNMD 479
            NG+  +H   R    ID +P++RF+LP KKKYEPQYAH+YF RL +L   +  +A+  FG   + KL+Y+KRI +++S++  ++ETV++GV+FR M SKPSILA Y+ P H+LIP+PP R+   YP  +D +F+EDE GRC LD+S LD      S VTGFV+A+KG EDR TG+FKV+  S    APQK+L  L  D +IC+ S+LS           ELL+EFL+G+  E+ E +   NIV +++AGN +P+++ T          H+PL  G+KER+A+P+V+ DRFLS +A+++PV  MPGE D  NYLLPQQP HRCLLPSSSRN N  RVPNPF C +  R++L TSGQ V+DFALY+ Q +       +   ++  +  PSG +V DIL  ML NRH+APTCPDTL S+PF +  DPF +E+TPH+F AGNQ+E+ +R +  P   +Q  S   MDIDG  GG  +VR+VSVPRFD TGQ V VNLR +D
Sbjct:   12 NGQE-SHPTVRVVSEIDLSPAKRFILPKKKKYEPQYAHVYFSRLKSLTAHVLKSAKLTFGEGEEGKLQYSKRIADIASKD--EMETVVVGVIFRHMKSKPSILAQYDVPSHELIPAPPDRATCTYPRDDDEVFIEDEYGRCALDLSQLDSAVATLSLVTGFVLALKGHEDRRTGSFKVNAISYAGQAPQKSLPELPGDKFICITSALSFGKADGDVLAAELLMEFLRGSAGEDPEGSTCANIVQLIVAGNSVPQLEDTESGPSAVLAAHRPLKSGEKERVAAPIVEVDRFLSVIASSLPVAVMPGEADPVNYLLPQQPFHRCLLPSSSRNENLARVPNPFECSVDKRVILGTSGQPVTDFALYEDQSS------VMKDGKEAGKLRPSGEKVLDILTLMLQNRHLAPTCPDTLASFPFSDGSDPFVLESTPHVFFAGNQREYASRLVRTPHVQTQASSGSSMDIDGVQGGEKTVRIVSVPRFDETGQVVLVNLRTLD 499          
BLAST of Gcaud9539.t1 vs. uniprot
Match: M2X386_GALSU (DNA polymerase delta subunit 2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X386_GALSU)

HSP 1 Score: 251 bits (641), Expect = 4.250e-74
Identity = 173/487 (35.52%), Postives = 253/487 (51.95%), Query Frame = 0
Query:    3 NGENGAHAVERRAVVIDTTPSQRFLLPPKKKYEPQYAHIYFCRLCALRPALQAAAQDNFGSPSQKLRYAKRIVNVSSENAQDVETVIIGVVFREMS-KPSILALYEQPGHDLIPSPPPRSWSPYPGSNDSIFLEDENGRCTLDISALDPMPDSFVTGFVVAVKGAEDRATGTFKVSGFSSVLPAPQKTLKPLSDDSYICLLSSLSVSSP---SFGLELLLEFLKGNT-LEEDETFQKNIVSVVIAGNLIPRV-DATPMHKP---LAVGDKERI--ASPMVDADRFLSGLAATVPVFHMPGENDATNYLLPQQPLHRCLLPSSSRNSNFKRVPNPFACELGGRLVLATSGQNVSDFALYQAQCNEESKEETLSLKEKEKRFEPSGVRVTDILECMLNNRHIAPTCPDTLGSYPFYEKDPFTIENTPHIFVAGNQKEFGTRTMNVPREASQDSNEQMDIDGELGGSVRLVSVPRFDTTGQAVFVNLRNM 478
            N  +    V  R  V        FLL   + Y  QY+ IYFCRL ALRP ++ AA++ +   +  + +  R++++     Q    VIIGV+++EM  KPSIL  Y +   + +P  P +    +   +D + LEDE GR  L+        +  +TG VVAVKG E  ++G F V         P K  + L +D +I  +S + + +P   S    + L+F+ G    EED  F   I  + + GNL+    D T  +K      V   +++  A P++ ADRFL+ L++T+PV  +PGE D TN LLPQQPLH  LLPSSS+ ++F+RV NP+ C + GR +L  SGQN+ D   Y           T      E R          ++E ML+ RH+ PT PDTL  YP+Y++DPF ++  PH++VAGNQ  +GTR +N                 + G  VRL+ +P F TTGQ V +NLR +
Sbjct:    2 NASHSTTTVMYRQTVDYEEEHNPFLLH-SRNYSQQYSQIYFCRLAALRPVVENAARNKW---TDGILFRDRLLHLQ----QGDNCVIIGVIYKEMDLKPSILKEYSKNPAEPVPILPVKP--SFVSDSDVVILEDETGRIRLNFDRCCLGVNILLTGTVVAVKGQE-TSSGDFSVDELCFPGIPPLKVPRSLDNDIFILFVSGIGLGAPWNVSMREAMFLDFITGKLGNEEDYHFCSQIGHLFVLGNLLSSAGDETLANKSNDQQTVNSAQQLFNAEPLISADRFLTTLSSTIPVTLLPGEADPTNLLLPQQPLHHSLLPSSSKYNSFRRVTNPYQCCINGRKILVCSGQNIDDACRYS----------TWDWNSVENRL--------TVMENMLSFRHLCPTAPDTLPCYPYYDEDPFVLKECPHVYVAGNQHAYGTRLINA---------------NDCG--VRLLCIPDFSTTGQVVLLNLRTL 442          
BLAST of Gcaud9539.t1 vs. uniprot
Match: A0A7S1XHK7_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHK7_9RHOD)

HSP 1 Score: 234 bits (597), Expect = 1.790e-68
Identity = 156/434 (35.94%), Postives = 225/434 (51.84%), Query Frame = 0
Query:   88 VIIGVVFREMS-KPSILALYEQPGHDLIPSPPPRSWSPYP----------GSNDSIFLEDENGRCTLDISALD----PMPDSFVTGFVVAVKGAEDRATGTFKVSGFSSV-LP---APQKTLKPLSDDSYICLLSSLSVSSPS---FGLELLLEFLKGNTLEEDETFQK---NIVSVVIAGNLIPRVDATPMHKPLAVGDKERIASPMVDADRFLSGLAATVPVFHMPGENDATNYLLPQQPLHRCLLPSSSRNSNFKRVPNPFACELGGRLVLATSGQNVSDFALYQAQCNEESKEETLSLKEKEKRFEPSGVRVTDILECMLNNRHIAPTCPDTLGSYPFYEKDPFTIENTPHIFVAGNQKEFGTRTMNVPREASQDSNEQMDIDGELGGSVRLVSVPRFDTTGQAVFVNLRNMDGSTAPERVDYISKISKL 496
            V++G+VFR +S KPSIL  Y + G D+IP+PP R    Y           G  DSIFLEDE+GR  LD S L+          V+G +VA++G  ++  G   V       LP   AP + +    +D ++C+LS L+  +       ++L+ EF+K N    D  FQK    IV +++AG LI   +   +               + + D  L  +A+++P+  +PG+ D TN+LLPQQP+++CLLPSSSR    +R PNP+   +GGR  L T GQNV DF  Y                  ++R      ++  +LE M+ +RH+APT PDTL SYPFYE DPF I+  P +F AG+Q +FGT+   V  E  +               VR++SVP F  T Q V VNLRN++     E VD++    K+
Sbjct:    2 VVVGIVFRHLSLKPSILKEYAKLGADMIPAPPQRDLVSYVKKPNSDGDAGGQEDSIFLEDESGRILLDFSGLEGEAAEKSKYLVSGMIVAIRGRPEKL-GVLLVRDICRAGLPTRSAPCQEVPICDEDRFVCILSGLNFGNADVNPLAIDLVTEFIKTNL--GDSKFQKWGSTIVRLIVAGKLINASENPDIQN-------------LRELDATLVSIASSIPIDLVPGDGDPTNFLLPQQPINKCLLPSSSRFKTLRRAPNPYEAMIGGRRFLGTGGQNVEDFLRYV----------------NDRRDSEGAEKILSVLEEMIRSRHLAPTAPDTLASYPFYESDPFIIDRCPDVFFAGSQPQFGTK---VVEEGDR--------------RVRIISVPDFYRTHQIVLVNLRNLNC----ELVDFVVDFEKV 382          
BLAST of Gcaud9539.t1 vs. uniprot
Match: A0A383VKS7_TETOB (Uncharacterized protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VKS7_TETOB)

HSP 1 Score: 235 bits (599), Expect = 8.750e-68
Identity = 173/488 (35.45%), Postives = 246/488 (50.41%), Query Frame = 0
Query:   14 RAVVIDTTPSQRFLLPPKKKYEPQYAHIYFCRLCALRPALQAAAQDNF-GSPSQKLRYAKRIVNVSSENAQDVETVIIGVVFREMS-KPSILALY-EQPGHDLIPSPPPRSWSPYPGSNDSIFLEDENGRCTLDISALDPMPDSFVTGFVVAVKGAEDRATGTFKVSGFSSVLPA--PQKTLKPL-SDDSYICLLSSLSVSSPSFGL---ELLLEFLKGNT-LEEDETFQKNIVSVVIAGNLIPRVDATPMHKPLAVGDKERIASPMVDADRFLSGLAATVPVFHMPGENDATNYLLPQQPLHRCLLPSSSRNSNFKRVPNPFACELGGRLVLATSGQNVSDFALYQAQCNEESKEETLSLKEKEKRFEPSGVRVTDILECMLNNRHIAPTCPDTLGSYPFYEKDPFTIENTPHIFVAGNQKEFGTRTMNVPREASQDSNEQMDIDGELGGSVRLVSVPRFDTTGQAVFVNLRNMDGSTAPERVDYIS 491
            RA    T   Q FLL  ++ ++ QYA +YF RL  LR  +Q   Q  + G+P  K      I++V     +D E  +IG ++++M  KPSIL  Y +QPG            + +   +DS+ LEDE  R ++     +  PDS VTG V+AV+G  +   G F VSG   VL A  P++  +PL  +D+Y+ L+S L +++    +   +LL++FL GN      +     +V +VIAG  + +++A     P +   +     P+ D D  ++ LAA +PV  MPG +D  N  LPQQPLH+CL P ++  S+F+RV NP A ELGG L+L TSGQN+ D A Y                         G    D+L C L   H+ PT PDTL  +PF   DPF ++  PHI +A NQ EF TR +                +G  G SVRLV VP F  TG  V VNLR +       + +Y S
Sbjct:   37 RATCEYTPRGQGFLLGKQRSFDRQYAQLYFSRLLKLRQVVQQQVQAAWPGTPVVK------ILSVG----EDQEVAVIGTLYKDMKLKPSILDEYAKQPGFKQA-----LGGTGFCSDDDSLVLEDEGARMSMRSECAELQPDSVVTGVVLAVRGRAEPG-GDFVVSG---VLWAGLPEQPQRPLPQEDAYVALVSGLQLANSKADMMQVQLLVDFLTGNLGAAPQQQLAAKVVQLVIAGGSLGQLEALAAANPYS-RQQTTDMEPVRDMDLVMTELAAALPVDIMPGPDDPANASLPQQPLHQCLFPGAAPYSSFRRVTNPHAFELGGCLLLGTSGQNIDDMAKYTR-----------------------GRSRLDLLACCLQWCHLCPTAPDTLTCFPFGADDPFVLQQCPHIMLAANQPEFDTRLL----------------EGPGGASVRLVCVPSFIKTGTLVLVNLRTLQCQPLTFQSNYTS 465          
BLAST of Gcaud9539.t1 vs. uniprot
Match: A0A7R9Y024_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y024_9VIRI)

HSP 1 Score: 231 bits (590), Expect = 2.120e-66
Identity = 168/507 (33.14%), Postives = 257/507 (50.69%), Query Frame = 0
Query:    2 SNGENGAHAVERRAVVIDTTPSQRFLLPPKKKYEPQYAHIYFCRLCALRPALQAAAQD-NFGSPSQKLRYAKRIVNVSSENAQDVETVIIGVVFREMS-KPSILALYEQPGHDLIPSPPPRSWSPYPGSNDSIFLEDENGRCTLDISALDPMPDSFVTGFVVAVKGAEDRATGTFKVSGFSSVLPA-PQKTLKPLSDD--SYICLLSSLSVSSPS---FGLELLLEFLKGNT-LEEDETFQKNIVSVVIAGN--LIPRVDATPMHKP---LAVGDKERIASPMVDADRFLSGLAATVPVFHMPGENDATNYLLPQQPLHRCLLPSSSRNSNFKRVPNPFACELGGRLVLATSGQNVSDFALYQAQCNEESKEETLSLKEKEKRFEPSGVRVTDILECMLNNRHIAPTCPDTLGSYPFYEKDPFTIENTPHIFVAGNQKEFGTRTMNVPREASQDSNEQMDIDGELGGSVRLVSVPRFDTTGQAVFVNLRNM---------DGSTAPE 485
            +NG     A +   V + +  + RF+LP  ++Y  QYA +YF RL A R  L+AAA    + S ++K    KR+V+++S   +  E  I G +F+ M  +P IL  Y + G     +  P S   Y G +D+I LE+E GR  L  SA++   +  VTG V   +G +  A G F V     + P  P++  +P+ +   SYI L+S L V SPS       LL++FL G     E++     I  V++AGN   +P   A    +    +A  +  ++ +P+ + D  L+ LA+ VP+  MPGE+D  N  LPQQP+H  L P +S  S ++ V NP+  ++GG  ++ TSGQ + D + +                         GV   ++LE  L  RH+APT PD+L SYP+ ++DPF ++++PH++ AGNQ++F T+                 ++G     VRLV VP F TTGQ V VN   +         DG+ APE
Sbjct:   19 ANGAANGGAAQLERVALPSATNGRFVLPTPRQYSRQYAQVYFSRLMAQRAPLEAAANAAGWQSHAKK----KRVVDLASAIGE--ECYITGTLFKNMKLQPRILDEYLKDGGLSTGAAKPDS---YVGDDDTIVLEEETGRVALVGSAVET--ERLVTGVVATARG-KVNAKGEFVVE--EMLFPGVPKQKPRPMEEGEASYIALVSGLGVGSPSSNPLAASLLVDFLTGQLGSAEEQKLCSRIARVIVAGNSLCVPEASAQGSGRGGGGMAAREAAKLGAPLAELDLLLAELASAVPIDLMPGESDPANVALPQQPMHSALFPRASTYSTYRPVTNPYTADVGGVSIVGTSGQALDDLSKFT-----------------------KGVSRLELLEATLRWRHLAPTAPDSLASYPYSDEDPFVVQDSPHVYFAGNQRQFDTKL----------------VEG-----VRLVCVPDFATTGQIVLVNTHTLECRLMEWSVDGAAAPE 467          
BLAST of Gcaud9539.t1 vs. uniprot
Match: I1HA74_BRADI (Uncharacterized protein n=23 Tax=Pooideae TaxID=147368 RepID=I1HA74_BRADI)

HSP 1 Score: 229 bits (584), Expect = 5.310e-66
Identity = 165/468 (35.26%), Postives = 246/468 (52.56%), Query Frame = 0
Query:   20 TTPSQRFLLPPKKKYEPQYAHIYFCRLCALRPALQAAAQDNFGSPSQKLRYAKRIVNVSSENAQDVETVIIGVVFREMS-KPSILALYEQPGHDLIPSPPPRSWSPYPGSNDSIFLEDENGRCTLDISALDPMPDSFVTGFVVAVKGAEDRATGTFKVSGFSSVLPAPQKTLKPLSDDSYICLLSSLSVSSPSFG---LELLLEFLKGNTLEEDE-TFQKNIVSVVIAGNLIPRVDATPMHKPLAVGDKERIASPMVDADRFLSGLAATVPVFHMPGENDATNYLLPQQPLHRCLLPSSSRNSNFKRVPNPFACELGGRLVLATSGQNVSDFALYQAQCNEESKEETLSLKEKEKRFEPSGVRVTDILECMLNNRHIAPTCPDTLGSYPFYEKDPFTIENTPHIFVAGNQKEFGTRTMNVPREASQDSNEQMDIDGELGGSVRLVSVPRFDTTGQAVFVNLRNMDGST 482
            +T  +R+ +  ++    QY+HIYF RL  +R  L+A        PS+K       V +  E  +D   V++G +++ M  KPSIL  Y +     IP   P ++  +P  +D++ LEDE+GR  L   A+ P   ++VTG VVA+ G E  A G F V         PQ  L  +++D Y+  +S LSV S +F     +LL++ + G+  +E+E     NIV VV+ GN +         + +A  D+ RIA P+++ D  L+ L A++PV  MPG ND  N+ LPQQPLHRCL   +S  + F   PNP   +L     + TSGQN+ D  LY                    R+  +  R+ + +E  L  RH+APT P++LG YP+ +KDPF IE+ PH++  GNQ  + TR +       Q S +Q          VRL+S+PRF  +G AV +NLRN++ ST
Sbjct:    9 STLDERYTIQGERYQGQQYSHIYFTRLHHMRNILRALV------PSRKPHLPVTTV-LGLEEGKD--CVLVGTLYKHMKLKPSILDEYSKE-RSAIPLVKPHNFM-HP--DDNLILEDESGRVAL-AGAISPA--AYVTGVVVALHGKETSA-GNFLVEDVLEAGLPPQTALPSINEDKYVVFVSGLSVGSSAFNPLQFQLLIDHITGHLGDENEQAIASNIVRVVVVGNSVHIAPRFLNGQTVASKDQPRIAEPIIELDIMLTQLVASLPVDIMPGCNDPANFSLPQQPLHRCLFAGASTYNTFSSCPNPHQFDLDNVKFIGTSGQNIDD--LY--------------------RYSDAKDRL-EFMERTLTWRHLAPTAPNSLGCYPYTDKDPFLIESCPHVYFVGNQDRYETRLL-------QGSEKQQ---------VRLISIPRFSDSGIAVMLNLRNLECST 420          
BLAST of Gcaud9539.t1 vs. uniprot
Match: UPI0007F003C6 (DNA polymerase delta small subunit n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F003C6)

HSP 1 Score: 227 bits (579), Expect = 3.930e-65
Identity = 168/481 (34.93%), Postives = 244/481 (50.73%), Query Frame = 0
Query:   11 VERRAVVIDTTPSQRFLLPPKKKYEPQYAHIYFCRLCALRPALQAAAQDNFGSPSQKLRYAKRIVNVSSENAQDVETVIIGVVFREMS-KPSILALYEQPGHDLIPSPPPRSWSPYPGSNDSIFLEDENGRCTLDISALDPMPDSFVTGFVVAVKGAEDRATGTFKV-----SGFSSVLPAPQKTLKPLSDDSYICLLSSLSVSSPSFG---LELLLEFLKGNTLEEDETFQKN---IVSVVIAGNLIPRVDATPMHKPLAVGDKERIASPMVDADRFLSGLAATVPVFHMPGENDATNYLLPQQPLHRCLLPSSSRNSNFKRVPNPFACELGGRLVLATSGQNVSDFALYQAQCNEESKEETLSLKEKEKRFEPSGVRVTDILECMLNNRHIAPTCPDTLGSYPFYEKDPFTIENTPHIFVAGNQKEFGTRTMNVPREASQDSNEQMDIDGELGGSVRLVSVPRFDTTGQAVFVNLRNMD 479
            +ER+  + ++   + F +  +     QY+ IYF RL  +R  L +        P+ K       V +  E   D E VI+G +++ M  KP +L  Y +    + P   P +   +  S+D + LEDE+GR  L  + L P    +VTG VVA+ G E  A G F V     +G    L  P K    L +D Y+  +S L++ S S     ++LL++ + G+  +E E  Q N   IV VVIAG+ +         + LA  D+ R++ P+ + D  L+ +AA++P+  MPG ND +N+ +PQQPLHRCL PSS+  + FK   NP + EL G   L TSGQN+ DF  Y                         G    + LE  L  RHIAPT P+TLG YPF ++DPF +E+ PH++ AGNQ +FGTR                 I G  G  VRL+S+PRF  TG AV +N+RN++
Sbjct:   11 IERKQSLYNSM-DEEFKIQKEMYRGQQYSQIYFARLHLMRTLLYSLV------PTWKPHLPVCTV-LGLEG--DKECVIVGTLYKHMKLKPCVLDEYSKE-RSVTPLVQPHN---FVHSDDYLILEDESGRVKLSGTTLSP--SFYVTGIVVALHGKETGA-GDFLVEDVLEAGLPPQLDPPNK----LGEDKYVVFVSGLNLGSSSSNPLQVQLLVDHITGHLGDEKE--QNNAAQIVQVVIAGDSVEIPRELLNGQNLAPKDQSRLSEPIKEVDILLTQIAASIPLDIMPGPNDPSNFAMPQQPLHRCLFPSSASYNTFKSCTNPHSFELDGVRFLGTSGQNIHDFEKYS-----------------------EGSEEVEFLERTLKWRHIAPTAPNTLGCYPFTDRDPFFVESCPHVYFAGNQNKFGTRL----------------ITGSDGQVVRLISIPRFSKTGTAVMLNMRNLE 429          
BLAST of Gcaud9539.t1 vs. uniprot
Match: DPOD2_ORYSJ (DNA polymerase delta small subunit n=21 Tax=Poaceae TaxID=4479 RepID=DPOD2_ORYSJ)

HSP 1 Score: 221 bits (563), Expect = 6.340e-63
Identity = 160/464 (34.48%), Postives = 238/464 (51.29%), Query Frame = 0
Query:   24 QRFLLPPKKKYEPQYAHIYFCRLCALRPALQAAAQDNFGSPSQKLRYAKRIVNVSSENAQDVETVIIGVVFREMS-KPSILALYEQPGHDLIPSPPPRSWSPYPGSNDSIFLEDENGRCTLDISALDPMPDSFVTGFVVAVKGAEDRATGTFKVSGFSSVLPAPQKTLKPLSDDSYICLLSSLSVSSPSFG---LELLLEFLKGNTLEEDE-TFQKNIVSVVIAGNLIPRVDATPMHKPLAVGDKERIASPMVDADRFLSGLAATVPVFHMPGENDATNYLLPQQPLHRCLLPSSSRNSNFKRVPNPFACELGGRLVLATSGQNVSDFALYQAQCNEESKEETLSLKEKEKRFEPSGVRVTDILECMLNNRHIAPTCPDTLGSYPFYEKDPFTIENTPHIFVAGNQKEFGTRTMNVPREASQDSNEQMDIDGELGGSVRLVSVPRFDTTGQAVFVNLRNMDGST 482
            +R+ +  +K    QY+HIYF RL  +R  L A        PS K       V +  E  +D   +I+G +++ M  KPSIL  Y +     IP   P ++  +P  +D + LEDE+GR TL   A+ P   ++VTG V+A+ G E  A G F V         PQ TL  +++D Y+  +S LS+ S  F     +LL++ + G+  +E+E +   NIV VV+AGN +         + +A  D+ RIA P+ + D  L+ L A++PV  MPG ND  N+ LPQQPLHRCL   ++  + F    NP   EL     + TSGQN+ D   Y               K+K            + +E  L  RH+APT P++LG YP+ +KDPF +E+ PH++  GNQ ++ T+ +       Q   +Q          VRL+ +PRF  +G AV +NLRN++ ST
Sbjct:   13 ERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALV------PSWKPHLPVTTV-LGLEEGKD--CIIVGTLYKHMKLKPSILDEYSKE-RSAIPLVKPHNFM-HP--DDHLILEDESGRVTL-AGAIPPA--AYVTGVVIALHGKETSA-GNFLVEDILEAGIPPQITLPSINEDKYVVFVSGLSIGSEKFNPLQFQLLIDHITGHLGDENEQSIASNIVRVVVAGNSVHISPRFFNGQAVASKDQSRIAEPIKELDIMLTQLVASLPVDMMPGSNDPANFSLPQQPLHRCLFAGAATYNTFSSCSNPHQFELDSVRFIGTSGQNIDDLYKYS------------DAKDK-----------LEFVERTLRWRHLAPTAPNSLGCYPYTDKDPFLVESCPHVYFVGNQDKYETQLL-------QGLEKQ---------KVRLICIPRFCDSGVAVMLNLRNLECST 420          
BLAST of Gcaud9539.t1 vs. uniprot
Match: A0A397UV67_9GLOM (DNA polymerase alpha/epsilon subunit B-domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UV67_9GLOM)

HSP 1 Score: 219 bits (558), Expect = 3.500e-62
Identity = 163/464 (35.13%), Postives = 234/464 (50.43%), Query Frame = 0
Query:   31 KKKYEPQYAHIYFCRLCALRPALQAAAQDNFGSPSQKLRYAKRIVNVSSENAQDVETVIIGVVFREMS-KPSILALYEQPGHDLIPSPPPRSWSPYPGSNDSIFLEDENGRCTLDISALDPMPDSFVTGFVVAVKGAEDRATGTFKVSGFSSVLPAPQKTLKPLSDDSYICLLSSLSV---SSPSFGLELLLEFLKGNTLEEDETFQKNIVS----VVIAGNLIPRVDATP---MHKPLAVGDKERIASPMVDADRFLSGLAATV-PVFHMPGENDATNYLLPQQPLHRCLLPSSSRNSNFKRVPNPFACELGGRLVLATSGQNVSDFALYQAQCNEESKEETLSLKEKEKRFEPSGVRVTDILECMLNNRHIAPTCPDTLGSYPFYEKDPFTIENTPHIFVAGNQKEFGTRTMNVPREASQDSNEQMDIDGELGGSVRLVSVPRFDTTGQAVFVNLRNMDGST 482
            K+K   QYA++Y+ RL  LR ++  AAQ  + S  +        VN   +    V   IIG V+ EM  KP+IL    +  H   PSPP +    Y   +D  FLEDE+GR  L    L    ++ VTG ++AV G E  + G F+V          Q+ +  ++DD YI L+S +++   SSP+  L+++ EFL G   E  ++F++N+ S    +++AGN +  V         K          A P+ D D  L+ + + V PV  MPG ND  N  LPQQP+   LLP + +NS F+RV NP+ CE+ G + L TSGQ + D A Y  +C     E+ L L E+                  L  RH+APT PDTL  +PF + DPF ++ TPH++  GNQKEF T  +  P + S                +RL+S+P F  TG  V VNL+N+D  T
Sbjct:   11 KEKIFRQYANLYYVRLLGLRASVLNAAQKKWESILKP--NTADTVNKILDIKFGVTCCIIGTVYMEMRLKPNILDDVTKE-HWAPPSPPRQK---YCSDDDEFFLEDESGRIKLIGDIL--KQENIVTGVIMAVLGKES-SEGNFEVFDICFAGLPYQQPMPVITDDKYIALISGINIGPNSSPALQLQMMTEFLNG---ELGDSFEQNLASKIALLIVAGNSLQDVKVVEDDKKEKKYGYDSSSYNAQPLFDLDNILNEICSEVLPVDLMPGSNDPVNAFLPQQPIIPSLLPKAYQNSTFRRVTNPYWCEIDGVVFLGTSGQTIDDIAKY-VEC-----EDRLKLTEQ-----------------TLYWRHVAPTTPDTLWCHPFRDYDPFIMKQTPHVYFVGNQKEFATTIIKGPEQQS----------------IRLISLPSFSETGNIVLVNLKNLDCHT 423          
The following BLAST results are available for this feature:
BLAST of Gcaud9539.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J331_9FLOR1.870e-23167.36DNA polymerase delta small subunit n=1 Tax=Gracila... [more]
R7Q512_CHOCR5.400e-15550.30Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2X386_GALSU4.250e-7435.52DNA polymerase delta subunit 2 n=1 Tax=Galdieria s... [more]
A0A7S1XHK7_9RHOD1.790e-6835.94Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A383VKS7_TETOB8.750e-6835.45Uncharacterized protein n=2 Tax=Scenedesmaceae Tax... [more]
A0A7R9Y024_9VIRI2.120e-6633.14Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
I1HA74_BRADI5.310e-6635.26Uncharacterized protein n=23 Tax=Pooideae TaxID=14... [more]
UPI0007F003C63.930e-6534.93DNA polymerase delta small subunit n=1 Tax=Daucus ... [more]
DPOD2_ORYSJ6.340e-6334.48DNA polymerase delta small subunit n=21 Tax=Poacea... [more]
A0A397UV67_9GLOM3.500e-6235.13DNA polymerase alpha/epsilon subunit B-domain-cont... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040663DNA polymerase delta subunit, OB-fold domainPFAMPF18018DNA_pol_D_Ncoord: 37..177
e-value: 2.4E-23
score: 82.7
NoneNo IPR availableGENE3D2.40.50.430coord: 44..181
e-value: 1.5E-20
score: 75.3
NoneNo IPR availableGENE3D3.60.21.50coord: 182..484
e-value: 3.5E-81
score: 274.5
IPR007185DNA polymerase alpha/delta/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 200..428
e-value: 6.2E-35
score: 120.4
IPR024826DNA polymerase delta/II small subunit familyPANTHERPTHR10416DNA POLYMERASE DELTA SUBUNIT 2coord: 12..480

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_766_length_18446_cov_4.656987contigNODE_766_length_18446_cov_4.656987:15926..17713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9539.t1Gcaud9539.t1Gracilaria caudata M_176_S67 malemRNANODE_766_length_18446_cov_4.656987 15926..17713 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9539.t1 ID=Gcaud9539.t1|Name=Gcaud9539.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=533bp
MSNGENGAHAVERRAVVIDTTPSQRFLLPPKKKYEPQYAHIYFCRLCALR
PALQAAAQDNFGSPSQKLRYAKRIVNVSSENAQDVETVIIGVVFREMSKP
SILALYEQPGHDLIPSPPPRSWSPYPGSNDSIFLEDENGRCTLDISALDP
MPDSFVTGFVVAVKGAEDRATGTFKVSGFSSVLPAPQKTLKPLSDDSYIC
LLSSLSVSSPSFGLELLLEFLKGNTLEEDETFQKNIVSVVIAGNLIPRVD
ATPMHKPLAVGDKERIASPMVDADRFLSGLAATVPVFHMPGENDATNYLL
PQQPLHRCLLPSSSRNSNFKRVPNPFACELGGRLVLATSGQNVSDFALYQ
AQCNEESKEETLSLKEKEKRFEPSGVRVTDILECMLNNRHIAPTCPDTLG
SYPFYEKDPFTIENTPHIFVAGNQKEFGTRTMNVPREASQDSNEQMDIDG
ELGGSVRLVSVPRFDTTGQAVFVNLRNMDGSTAPERVDYISKISKLVQYR
NEYEAQCTFIVSAGKALIPTILDRSYRLTTQI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040663DNA_pol_D_N
IPR007185DNA_pol_a/d/e_bsu
IPR024826DNA_pol_delta/II_ssu