Gcaud9537.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9537.t1
Unique NameGcaud9537.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length217
Homology
BLAST of Gcaud9537.t1 vs. uniprot
Match: A0A2V3J384_9FLOR (Proteasome subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J384_9FLOR)

HSP 1 Score: 409 bits (1050), Expect = 6.280e-144
Identity = 199/216 (92.13%), Postives = 209/216 (96.76%), Query Frame = 0
Query:    1 MTPIQPEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEDPDVVTAAKIFRTFCYYNKEQLMAGIIVAGYDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGFCDANFKDGMTKEECKEFVKNALALAMSRDGSSGGVIRLVIIDKEGATKEFHPGNKLPEFWQG 216
            MTPIQPEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPM DKI+CCRSGSAADTQIISDYVRHYLSMHAIELSE+PDV TAAKIFRTFCYYNK QLMAGIIVAGYD KKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGFCD+N+K+GMTKEEC  FVKNAL+LAM+RDGSSGGVIRLVIIDK G+++EFHPGNKLPEFWQG
Sbjct:    1 MTPIQPEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMHDKIYCCRSGSAADTQIISDYVRHYLSMHAIELSEEPDVATAAKIFRTFCYYNKGQLMAGIIVAGYDDKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGFCDSNYKEGMTKEECITFVKNALSLAMARDGSSGGVIRLVIIDKSGSSREFHPGNKLPEFWQG 216          
BLAST of Gcaud9537.t1 vs. uniprot
Match: R7Q3I5_CHOCR (Proteasome subunit beta n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3I5_CHOCR)

HSP 1 Score: 373 bits (958), Expect = 6.620e-130
Identity = 180/216 (83.33%), Postives = 198/216 (91.67%), Query Frame = 0
Query:    1 MTPIQPEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEDPDVVTAAKIFRTFCYYNKEQLMAGIIVAGYDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGFCDANFKDGMTKEECKEFVKNALALAMSRDGSSGGVIRLVIIDKEGATKEFHPGNKLPEFWQG 216
            M P   EW + EHSMGTSIMAVAFDGGVVMGADSRTTTG+YIANRVSDKITPMTDKI+CCRSGSAADTQIISDYVR+YLSMH IEL EDPDV TAAK+FR  CY+NK QLMAGIIVAG+D  KGGQVFTIPLGGALVQQPFAIGGSGSSYIYG+CD+NFK+GMTKEEC EFVKNAL+LAM+RDGSSGGV+RLV+IDK+G+ ++F PGNKLPEFW G
Sbjct:    1 MDPYGQEWMNAEHSMGTSIMAVAFDGGVVMGADSRTTTGAYIANRVSDKITPMTDKIYCCRSGSAADTQIISDYVRYYLSMHDIELGEDPDVDTAAKLFRELCYHNKGQLMAGIIVAGWDKHKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGYCDSNFKEGMTKEECMEFVKNALSLAMARDGSSGGVVRLVVIDKDGSERKFFPGNKLPEFWMG 216          
BLAST of Gcaud9537.t1 vs. uniprot
Match: Q7XYA9_GRIJA (Proteasome subunit beta (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XYA9_GRIJA)

HSP 1 Score: 342 bits (876), Expect = 2.370e-117
Identity = 165/205 (80.49%), Postives = 186/205 (90.73%), Query Frame = 0
Query:   12 EHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEDPDVVTAAKIFRTFCYYNKEQLMAGIIVAGYDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGFCDANFKDGMTKEECKEFVKNALALAMSRDGSSGGVIRLVIIDKEGATKEFHPGNKLPEFWQG 216
            EHSMGTSIMAV FDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIF CRSGSAADTQIISDY R+YLSMH IEL EDP V T A++F   CY+NKE LMA IIV GYDA+KGGQVF+IPLGGAL++QPF IGGSGSSYIYG+CDANFK+GM+K+EC EFVKNAL+LAM+RDGSSGGVIRLV+IDK+GA+++F  G+KLP+FW G
Sbjct:   16 EHSMGTSIMAVTFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFVCRSGSAADTQIISDYCRYYLSMHHIELGEDPRVETTARLFNQLCYHNKEMLMASIIVGGYDARKGGQVFSIPLGGALIKQPFTIGGSGSSYIYGYCDANFKEGMSKDECIEFVKNALSLAMARDGSSGGVIRLVVIDKDGASRQFIHGDKLPQFWVG 220          
BLAST of Gcaud9537.t1 vs. uniprot
Match: A0A1X6NSP2_PORUM (Proteasome subunit beta n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSP2_PORUM)

HSP 1 Score: 317 bits (811), Expect = 1.940e-107
Identity = 152/211 (72.04%), Postives = 180/211 (85.31%), Query Frame = 0
Query:    6 PEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEDPDVVTAAKIFRTFCYYNKEQLMAGIIVAGYDAKKGGQV---FTIPLGGALVQQPFAIGGSGSSYIYGFCDANFKDGMTKEECKEFVKNALALAMSRDGSSGGVIRLVIIDKEGATKEFHPGNKLPEF 213
            PEW + EHSMGTSIMAVAFDGGVV+GADSRTTTG+YIANRVSDKITPMTD IFCCRSGSAADTQ ISDYVR+YL MH +E+   P V TAA++FR  CY NK QLMAG+I AG+D+ KGGQV   F +P+GG+LV+QPFAIGGSGS+YIYG+CDA++K+GMTKEEC+ FVKNA+ALAMSRDGSSGGVIR+V +DK+G  +    G ++P F
Sbjct:   11 PEWMTAEHSMGTSIMAVAFDGGVVLGADSRTTTGTYIANRVSDKITPMTDSIFCCRSGSAADTQAISDYVRYYLDMHVVEMGTPPLVKTAARLFRELCYSNKTQLMAGMICAGWDSAKGGQVRQVFCVPIGGSLVEQPFAIGGSGSTYIYGYCDAHYKEGMTKEECQAFVKNAVALAMSRDGSSGGVIRMVTVDKDGTDRTCFGGEQVPSF 221          
BLAST of Gcaud9537.t1 vs. uniprot
Match: A0A5J4Z3G2_PORPP (Proteasome endopeptidase complex n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3G2_PORPP)

HSP 1 Score: 317 bits (811), Expect = 8.240e-107
Identity = 152/210 (72.38%), Postives = 177/210 (84.29%), Query Frame = 0
Query:    7 EWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEDPDVVTAAKIFRTFCYYNKEQLMAGIIVAGYDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGFCDANFKDGMTKEECKEFVKNALALAMSRDGSSGGVIRLVIIDKEGATKEFHPGNKLPEFWQG 216
            +WT+TEH MGT+IMA AFDGGVVMGADSRTTTGSYIANRVSDKITP+TDK++CCRSGSAADTQ ISDYVR Y + HAIEL ++P V T A +FR  CY NK  LMAGII AG+D   GGQV+ I LGG+ VQQPF+IGGSGS+YIYG+CD+NF++ MT++EC EFVK+ALALAM+RDGSSGGVIR+VIID  G  K F PG+KLP  WQG
Sbjct:   54 DWTNTEHMMGTTIMATAFDGGVVMGADSRTTTGSYIANRVSDKITPITDKVWCCRSGSAADTQAISDYVRLYTAQHAIELGQEPRVKTVANLFREICYSNKANLMAGIICAGWDQFSGGQVYNITLGGSCVQQPFSIGGSGSTYIYGYCDSNFRENMTRDECVEFVKHALALAMARDGSSGGVIRMVIIDSSGVQKVFIPGDKLPMAWQG 263          
BLAST of Gcaud9537.t1 vs. uniprot
Match: A9UWM7_MONBE (Proteasome subunit beta n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UWM7_MONBE)

HSP 1 Score: 304 bits (778), Expect = 1.720e-102
Identity = 142/216 (65.74%), Postives = 180/216 (83.33%), Query Frame = 0
Query:    1 MTPIQPEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEDPDVVTAAKIFRTFCYYNKEQLMAGIIVAGYDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGFCDANFKDGMTKEECKEFVKNALALAMSRDGSSGGVIRLVIIDKEGATKEFHPGNKLPEFWQG 216
            M P QP+W + EH  GT+IMAV F  GVV+GADSRTTTGSY+ANRV+DK+T +TD I+CCRSGSAADTQ I+D VR+YL +H++E+ EDP+V TAA +FRTFCY N+E LMAGII AG+D KKGGQV++IPLGG LV+QPF+IGGSGS+++YG CDA++K+ MTK+EC +FV+ ALALAMSRDGSSGGVIR  +I + G  +E   GN+LP F++G
Sbjct:    1 MEPAQPDWVTAEHLTGTTIMAVEFADGVVIGADSRTTTGSYVANRVTDKLTKITDNIYCCRSGSAADTQAIADIVRYYLDLHSMEMDEDPEVHTAASVFRTFCYNNRESLMAGIICAGWDKKKGGQVYSIPLGGLLVRQPFSIGGSGSTFLYGHCDASYKENMTKDECLKFVRTALALAMSRDGSSGGVIRTAVITEAGVEREVVLGNELPTFYEG 216          
BLAST of Gcaud9537.t1 vs. uniprot
Match: PSB6_DICDI (Proteasome subunit beta type-6 n=4 Tax=Dictyosteliales TaxID=2058949 RepID=PSB6_DICDI)

HSP 1 Score: 303 bits (775), Expect = 4.600e-102
Identity = 143/211 (67.77%), Postives = 173/211 (81.99%), Query Frame = 0
Query:    6 PEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEDPDVVTAAKIFRTFCYYNKEQLMAGIIVAGYDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGFCDANFKDGMTKEECKEFVKNALALAMSRDGSSGGVIRLVIIDKEGATKEFHPGNKLPEFWQG 216
            PEW      +GTSIMAV +DGGV+MGADSRTTTG+YIANRV++KITP+ ++I+CCRSGSAADTQ ISDYVR+YL MH  EL ++PDV TAA +F+  CY NK  LMAGIIVAG+D  +GG V+ I LGG++V+QPFAIGGSGS+YIYG+CD+ FK  MTK+EC EFV+N+LALAM RDGSSGGVIRL IIDK G  ++  PGN LP FW+G
Sbjct:    4 PEWLDNAVDLGTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHERIYCCRSGSAADTQAISDYVRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQGGSVYNISLGGSMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDECIEFVQNSLALAMFRDGSSGGVIRLCIIDKNGVERKMIPGNNLPRFWEG 214          
BLAST of Gcaud9537.t1 vs. uniprot
Match: UPI000644B9CE (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B9CE)

HSP 1 Score: 301 bits (772), Expect = 1.270e-101
Identity = 146/211 (69.19%), Postives = 175/211 (82.94%), Query Frame = 0
Query:    6 PEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEDPDVVTAAKIFRTFCYYNKEQLMAGIIVAGYDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGFCDANFKDGMTKEECKEFVKNALALAMSRDGSSGGVIRLVIIDKEGATKEFHPGNKLPEFWQG 216
            PEW +    +GTSIMAV FDGGVVMGADSRTTTGSYIANRV++KITP+ ++I+CCRSGSAADTQ ISDYVR+YL +H  EL EDP+V TAA +F+  CY NK QLMAGIIVAG+D + GG V+ I LGG++V+QPFAIGGSGS+YIYG+CD+ F+  M+K+EC EFVKN+LALAM RDGSSGGVIRL IIDK G  +   PGN+LP FW+G
Sbjct:    4 PEWLANAVDLGTSIMAVEFDGGVVMGADSRTTTGSYIANRVTNKITPIHERIYCCRSGSAADTQAISDYVRYYLEIHNSELGEDPEVKTAASLFQLLCYNNK-QLMAGIIVAGWDKQTGGSVYNISLGGSMVRQPFAIGGSGSTYIYGYCDSQFRPKMSKDECVEFVKNSLALAMFRDGSSGGVIRLCIIDKSGVERRMIPGNQLPRFWEG 213          
BLAST of Gcaud9537.t1 vs. uniprot
Match: F4Q3J1_CAVFA (Proteasome subunit beta n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q3J1_CAVFA)

HSP 1 Score: 300 bits (768), Expect = 5.340e-101
Identity = 144/211 (68.25%), Postives = 170/211 (80.57%), Query Frame = 0
Query:    6 PEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEDPDVVTAAKIFRTFCYYNKEQLMAGIIVAGYDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGFCDANFKDGMTKEECKEFVKNALALAMSRDGSSGGVIRLVIIDKEGATKEFHPGNKLPEFWQG 216
            PEW      +GT+IMAV FDGGVVMGADSRTTTG+YIANRV++KITP+ +KI+CCRSGSAADTQ ISDYVR+YL MH  EL + P V TAA +F+  CY NK  LMAGIIVAG+D  KGG V+ I LGG++++QPFA+ GSGS+Y+YG CDA FK GMTKEEC +FV+NALALAM RDGSSGGVIRL IIDKE   +   PGN+LP FW+G
Sbjct:    4 PEWVDNAVDLGTTIMAVEFDGGVVMGADSRTTTGAYIANRVTNKITPIHEKIYCCRSGSAADTQAISDYVRYYLEMHTQELDDQPVVKTAASLFQLLCYNNKNNLMAGIIVAGWDKDKGGSVYNISLGGSMIKQPFAMSGSGSTYLYGHCDAQFKPGMTKEECVKFVQNALALAMFRDGSSGGVIRLCIIDKENVERRTIPGNQLPRFWEG 214          
BLAST of Gcaud9537.t1 vs. uniprot
Match: A0A7S3AC27_9RHOD (Proteasome subunit beta n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AC27_9RHOD)

HSP 1 Score: 302 bits (774), Expect = 5.980e-101
Identity = 139/210 (66.19%), Postives = 177/210 (84.29%), Query Frame = 0
Query:    7 EWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEDPDVVTAAKIFRTFCYYNKEQLMAGIIVAGYDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGFCDANFKDGMTKEECKEFVKNALALAMSRDGSSGGVIRLVIIDKEGATKEFHPGNKLPEFWQG 216
            +WT  EH +GTSIMAV +DGGV++GADSRTTTGSYIANRVSDKITP+T+K+FCCRSGSAADTQ ISDYVR+Y+SMHA+E+ E+P V T  K+FR  CY NK  L+A II AGYD  +GGQV++I LGG++++QPFAI GSGSSYIYGFCD+NFK+GM K+E ++FV  ALALAMSRDGSSGGVIR + I++ G  ++++ G ++P F++G
Sbjct:   69 DWTQNEHMLGTSIMAVVYDGGVILGADSRTTTGSYIANRVSDKITPITEKVFCCRSGSAADTQAISDYVRYYISMHALEIGEEPKVATVGKMFRLICYRNKANLLAAIICAGYDKHEGGQVYSITLGGSILKQPFAISGSGSSYIYGFCDSNFKEGMGKDEAEQFVIRALALAMSRDGSSGGVIRTLTINESGVERKYYSGKEIPGFYEG 278          
The following BLAST results are available for this feature:
BLAST of Gcaud9537.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J384_9FLOR6.280e-14492.13Proteasome subunit beta n=1 Tax=Gracilariopsis cho... [more]
R7Q3I5_CHOCR6.620e-13083.33Proteasome subunit beta n=1 Tax=Chondrus crispus T... [more]
Q7XYA9_GRIJA2.370e-11780.49Proteasome subunit beta (Fragment) n=1 Tax=Griffit... [more]
A0A1X6NSP2_PORUM1.940e-10772.04Proteasome subunit beta n=2 Tax=Porphyra umbilical... [more]
A0A5J4Z3G2_PORPP8.240e-10772.38Proteasome endopeptidase complex n=1 Tax=Porphyrid... [more]
A9UWM7_MONBE1.720e-10265.74Proteasome subunit beta n=1 Tax=Monosiga brevicoll... [more]
PSB6_DICDI4.600e-10267.77Proteasome subunit beta type-6 n=4 Tax=Dictyosteli... [more]
UPI000644B9CE1.270e-10169.19hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F4Q3J1_CAVFA5.340e-10168.25Proteasome subunit beta n=1 Tax=Cavenderia fascicu... [more]
A0A7S3AC27_9RHOD5.980e-10166.19Proteasome subunit beta n=1 Tax=Rhodosorus marinus... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000243Peptidase T1A, proteasome beta-subunitPRINTSPR00141PROTEASOMEcoord: 145..156
score: 69.89
coord: 181..192
score: 66.86
coord: 156..167
score: 47.54
coord: 24..39
score: 61.79
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 15..195
e-value: 1.3E-45
score: 155.2
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1coord: 17..216
e-value: 1.2E-58
score: 199.9
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 7..214
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 5..205
NoneNo IPR availableCDDcd03762proteasome_beta_type_6coord: 17..204
e-value: 1.74451E-128
score: 358.075
IPR035140Proteasome subunit beta 6PANTHERPTHR11599:SF46PROTEASOME SUBUNIT BETA TYPE-6coord: 5..205
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 20..67
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 16..195
score: 47.331554

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_766_length_18446_cov_4.656987contigNODE_766_length_18446_cov_4.656987:12654..13304 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9537.t1Gcaud9537.t1Gracilaria caudata M_176_S67 malemRNANODE_766_length_18446_cov_4.656987 12654..13304 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9537.t1 ID=Gcaud9537.t1|Name=Gcaud9537.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=217bp
MTPIQPEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKI
TPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEDPDVVTAAKIFR
TFCYYNKEQLMAGIIVAGYDAKKGGQVFTIPLGGALVQQPFAIGGSGSSY
IYGFCDANFKDGMTKEECKEFVKNALALAMSRDGSSGGVIRLVIIDKEGA
TKEFHPGNKLPEFWQG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000243Pept_T1A_subB
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR035140Proteasome_beta6
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type