Gcaud9535.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9535.t1
Unique NameGcaud9535.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length354
Homology
BLAST of Gcaud9535.t1 vs. uniprot
Match: A0A2V3J2W7_9FLOR (NAD(P)H-hydrate epimerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2W7_9FLOR)

HSP 1 Score: 456 bits (1174), Expect = 1.740e-157
Identity = 218/342 (63.74%), Postives = 264/342 (77.19%), Query Frame = 0
Query:   12 INAAFMSPHHLSGRRKNLDCFGQDLVARKRSLAFQAAKYSRPNVPQMKSDPPQEGSKMDNMKQEDFHSYLTPELGIEAQRDAFSMAERDILAVADMCAIGFVEAFMQCYNTDDIYSVFIVCGSGFNGLVGLKSAIMLKEKGYDPAVHFSHPSKYVDMPSVCSKHDIPLYEFVPSTLEFYFQVIVDAMLGVGFDGGDIHPPYWEVFEMLISTRRPIASIDVPSGWDLVTGPRPIDRTADTFIKPELLVSLGAPKLCSKVFAGAYHFIAGRHLPKQYFADHGINVPSFPRDSHSVLFSSSPIRAFGNGEVYGRPGAFNATLFKKNPRRQWVDIDDHMDLWDELD 353
            + AAF+ P  + G  ++   F Q  + R+R + F +++    NV  +   P Q+G   +N +    ++Y+TPE+  +A  DA ++A  D+  VA++CAIGFVEA  QCY   D  +VF+VCG G  GL+G+ +AI LKEKGYDPAVHFSHPSKYVD  S+  K+DIP+YEFVP+TLEFYFQVIVDA+LGVGFDGGDIH PYW+VFEMLISTRRPIASIDVPSGWDL TGPRPIDRTA TFIKPELLVSLGAPKLCSK+FAGA+HF+AG HLP+ YF + GI+VP FP DSH+VL SSSP +   NGE YG+PG FNATL+ KNPRRQWVDIDD MDLWDELD
Sbjct:   70 VMAAFLQPQPVPGLYRH--SFRQHNLCRRRLVRFSSSRTLNLNVRMLSDTPGQQGQGGENAQSNQPNAYVTPEVAQQAMIDAIALAGDDVQRVAELCAIGFVEALTQCYKVSDAPAVFVVCGPGLTGLIGVYTAIKLKEKGYDPAVHFSHPSKYVDKSSIRKKYDIPVYEFVPTTLEFYFQVIVDALLGVGFDGGDIHAPYWQVFEMLISTRRPIASIDVPSGWDLTTGPRPIDRTAATFIKPELLVSLGAPKLCSKMFAGAFHFVAGLHLPQSYFEEKGISVPVFPGDSHTVLLSSSPFQFTENGEAYGKPGQFNATLYTKNPRRQWVDIDDDMDLWDELD 409          
BLAST of Gcaud9535.t1 vs. uniprot
Match: R7Q1H5_CHOCR (YjeF N-terminal domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q1H5_CHOCR)

HSP 1 Score: 356 bits (913), Expect = 1.360e-119
Identity = 171/286 (59.79%), Postives = 214/286 (74.83%), Query Frame = 0
Query:   70 DNMKQEDFHSYLTPELGIEAQRDAFSMAERDILAVADMCAIGFVEAFMQCYNTDDIYSVFIVCGSGFNGLVGLKSAIMLKEKGYDPAVHFSHPSKYVDMPSVCSKHDIPLYEFVPSTLEFYFQVIVDAMLGVGFDGGDIHPPYWEVFEMLISTRRPIASIDVPSGWDLVTGPRPIDRTADTFIKPELLVSLGAPKLCSKVFAGAYHFIAGRHLPKQYFADHGINVPSFP-RDSHSVLFSSSPIRAFG-NGEVYGRPGAFNATLFKKNPRRQWVDIDDHMDLWDELD 353
            DN K    H  ++PEL  +A  DA + +  D++ +A  CA GF +A  QCY +++I  VFI CGSG NGL+GL+ A+ L++KGY P V+ +  SK+ +  SVC +  I L++F+PSTLEFY+ ++VDA+LG GFDGGDI   YW V+EMLISTR  I S+DVPSGWDL TGPR ID TAD+FIKPE+LVSLGAPKL SKVFAG YHFIAGRHLP+ YF + GI+VP+FP  +S+ VL SS+P R  G NGE YGRPG FNATL+ KNP R+WVD+D H DLWDELD
Sbjct:   11 DNSKPRQTH--ISPELANQAINDAITYSGGDVVVMARTCASGFCDALQQCYGSEEISDVFIACGSGLNGLIGLQVAVELQKKGYAPEVYAAEQSKHANFRSVCDEAGIDLHDFIPSTLEFYYDIVVDALLGTGFDGGDIRQQYWTVYEMLISTRLAIVSLDVPSGWDLSTGPRKIDVTADSFIKPEVLVSLGAPKLGSKVFAGGYHFIAGRHLPQSYFLEKGISVPAFPGEESNCVLMSSNPFRFEGANGETYGRPGQFNATLYTKNPTREWVDVDKHDDLWDELD 294          
BLAST of Gcaud9535.t1 vs. uniprot
Match: R7QM21_CHOCR (YjeF N-terminal domain-containing protein n=6 Tax=Chondrus crispus TaxID=2769 RepID=R7QM21_CHOCR)

HSP 1 Score: 269 bits (687), Expect = 4.330e-85
Identity = 133/253 (52.57%), Postives = 175/253 (69.17%), Query Frame = 0
Query:   36 LVARKRSLAFQAAKYSRPNVP-QMKSDPPQEGSKMDNMKQEDFHSYLTPELGIEAQRDAFSMAERDILAVADMCAIGFVEAFMQCYNTDDIYSVFIVCGSGFNGLVGLKSAIMLKEKGYDPAVHFSHPSKYVDMPSVCSKHDIPLYEFVPSTLEFYFQVIVDAMLGVGFDGGDIHPPYWEVFEMLISTRRPIASIDVPSGWDLVTGPRPIDRTADTFIKPELLVSLGAPKLCSKVFAGAYHFIAGRHLPKQYF 287
            L  R R+  F+ A + R      M+ +  +   + DN K    H  ++PEL  +A  DA + +  D++ +A  CA GF +A  QCY +++I  VFI CGSG NGL+GL+ A+ L+++GY PAV+ +  SK+ +  SVC +  I L++F+PSTLEFY+ ++VDA+LG GFDGGDI   YW V+EMLISTR  I S+DVPSGWDL TGPR ID TAD+FIKPE+LVSL APKL S VFAG YHFIAGRHLP+ YF
Sbjct:   16 LTGRARAKHFRVAGHRRSQGRISMQMEVDKSSKQRDNSKPRQTH--ISPELANQAINDAITYSGGDVVVMARTCASGFCDALQQCYGSEEISDVFIACGSGLNGLIGLQVAVELQKRGYAPAVYAAEQSKHANFRSVCDEAGIDLHDFIPSTLEFYYDIVVDALLGTGFDGGDIRQQYWTVYEMLISTRLAIVSLDVPSGWDLSTGPRKIDVTADSFIKPEVLVSLEAPKLGSNVFAGGYHFIAGRHLPQSYF 266          
BLAST of Gcaud9535.t1 vs. uniprot
Match: R7QQK3_CHOCR (YjeF N-terminal domain-containing protein n=4 Tax=Chondrus crispus TaxID=2769 RepID=R7QQK3_CHOCR)

HSP 1 Score: 247 bits (631), Expect = 1.490e-77
Identity = 115/184 (62.50%), Postives = 142/184 (77.17%), Query Frame = 0
Query:  104 VADMCAIGFVEAFMQCYNTDDIYSVFIVCGSGFNGLVGLKSAIMLKEKGYDPAVHFSHPSKYVDMPSVCSKHDIPLYEFVPSTLEFYFQVIVDAMLGVGFDGGDIHPPYWEVFEMLISTRRPIASIDVPSGWDLVTGPRPIDRTADTFIKPELLVSLGAPKLCSKVFAGAYHFIAGRHLPKQYF 287
            +A  CA GF +A  QCY +++I  VFI CGSG NGL+GL+ A+ L+++GY PAV+ +  SK+ +  SVC +  I L++F+PSTLEFY  ++VDA+LG GFDGGDI   YW V+EMLISTR  I S+DVPSGWDL TGPR ID TAD+FIKPE+LVSL APKL S VFAG YHFIAGRHLP+ YF
Sbjct:    1 MARTCASGFCDALQQCYGSEEISDVFIACGSGLNGLIGLQVAVELQKRGYAPAVYAAEQSKHANFRSVCDEAGIDLHDFIPSTLEFYNDIVVDALLGTGFDGGDIRQQYWTVYEMLISTRLAIVSLDVPSGWDLWTGPRKIDVTADSFIKPEVLVSLEAPKLGSNVFAGGYHFIAGRHLPQSYF 184          
BLAST of Gcaud9535.t1 vs. uniprot
Match: A0A7S1TJI5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TJI5_9RHOD)

HSP 1 Score: 175 bits (443), Expect = 3.120e-48
Identity = 100/272 (36.76%), Postives = 149/272 (54.78%), Query Frame = 0
Query:  106 DMCAIGFVEAFMQCYNTDDIYSVFIVCGSGFNGLVGLKSAIMLKEKGYDPAVHFSHPSKYVDM---------PSVCSKHDIPLYEFVPSTLEFYFQVIVDAMLGVGFDGGDIHPPYWEVFEMLI----STRRPIASIDVPSGWDLVTGPRPIDRTADTFIKPELLVSLGAPKLCSKVFAGAYHFIAGRHLPKQYFADHGINVPSFPRDSHSVL--------FSSSPIRA-FGN--GEVYGRPGAFNATLFKKNPRRQWVDIDDHMDLWDELD 353
            D    G V+  + C+  D  + VF++CG G  G +G+  A  L + GYD +V+    S               S+  +  I + +F+PST++ +F ++VDA+ G+     +      ++ EM++    ++ RP+ S+D+P GWD  +GP    R  DTFIKP++LVSLG PKL SK+FAG +H++AGR  P          +   P D  S L         S++P ++ FG   GEVYG PG F ATLF K P+R WVD+++  DLWDELD
Sbjct:   79 DSSVDGVVDVVIHCFPPDRCFGVFVLCGHGETGKIGMNVARRLADVGYDVSVYHEQSSASSSEGDGENTFTGSSLLRESGIAVLDFIPSTMDAHFDLVVDAVAGIELTENE------QIVEMVVERISNSSRPVLSLDMPVGWDSDSGPTLWARRTDTFIKPDVLVSLGVPKLGSKMFAGMFHYLAGRLSPPSIEDLDQCGIRYSPLDLGSDLDSPKTFRLISTNPFKSGFGKKPGEVYGSPGQFIATLFTKQPKRTWVDVENDDDLWDELD 344          
BLAST of Gcaud9535.t1 vs. uniprot
Match: R7QKS2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKS2_CHOCR)

HSP 1 Score: 157 bits (396), Expect = 7.380e-44
Identity = 77/112 (68.75%), Postives = 89/112 (79.46%), Query Frame = 0
Query:  244 IDRTADTFIKPELLVSLGAPKLCSKVFAGAYHFIAGRHLPKQYFADHGINVPSFP-RDSHSVLFSSSPIRAFG-NGEVYGRPGAFNATLFKKNPRRQWVDIDDHMDLWDELD 353
            I    ++FIKPE+LVSLGAPKL SKVFAG YHFIAGRHLP+ YF + GI+VP+FP  +S+ VL SS+P R  G NGE YGRPG FNATL+ KNP R+WVDID H DLWDELD
Sbjct:   24 IASRCNSFIKPEVLVSLGAPKLGSKVFAGGYHFIAGRHLPQSYFLEKGISVPAFPGEESNCVLMSSNPFRFEGANGETYGRPGQFNATLYTKNPTREWVDIDKHDDLWDELD 135          
BLAST of Gcaud9535.t1 vs. uniprot
Match: A0A137P1L7_CONC2 (YjeF N-terminal domain-like protein (Fragment) n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P1L7_CONC2)

HSP 1 Score: 130 bits (328), Expect = 7.890e-33
Identity = 71/202 (35.15%), Postives = 111/202 (54.95%), Query Frame = 0
Query:  114 EAFMQCYNTDDIYSVFIVCGSGFNGLVGLKSAIMLKEKGYDPAVHFSHPSK---YVDMPSVCSKHDIPLYEFVP-STLEFYFQVIVDAMLGVGFDGGDIHPPYWEVFEMLISTRRPIASIDVPSGWDLVTGPRPIDRTADTFIKPELLVSLGAPKLCSKVFAGAYHFIAGRHLPKQYFADHGINVPSFPRDSHSVLFSSSPI 311
            ++    +N  ++  V IVCG G NG  GL  A  LK  GY P + +  PS    + ++ + C   DIP+   V  S ++  +++IVDA+ G  F G  I PP+     +L +T+ P+ SIDVPSGW +   P+  D   + +  P +L+SL APKLC+K F GAYH++ GR +PK+      +N+P +      V+  +S +
Sbjct:    9 QSIYSAFNNKNLKKVAIVCGPGNNGGDGLVCARHLKHFGYSPTIIYPKPSTKDLFKNLITQCKGLDIPVKNEVEVSEVDKEYELIVDAIFGFSFSG-QIRPPFGPYINLLKTTKLPVVSIDVPSGWSIDEEPKESD---ENYFMPTMLISLTAPKLCAKYFNGAYHYLGGRFIPKEMADQLELNLPDYKGIDQFVILKNSDL 206          
BLAST of Gcaud9535.t1 vs. uniprot
Match: A0A2P2HYV2_9CRUS (NAD(P)H-hydrate epimerase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2HYV2_9CRUS)

HSP 1 Score: 131 bits (329), Expect = 2.700e-32
Identity = 82/236 (34.75%), Postives = 121/236 (51.27%), Query Frame = 0
Query:   81 LTPELGIEAQRDAFSMAERDILAVADMCAIGFVEAFMQCYNTDDIYSVFIVCGSGFNGLVGLKSAIMLKEKGYDPAVHFSHPSKYVDMPSV------CSKHDIPLYEFVPST--LEFYFQVIVDAMLGVGFDGGDIHPPYWEVFEMLISTRRPIASIDVPSGWDLVTGPRPIDRTADTFIKPELLVSLGAPKLCSKVFAGAYHFIAGRHLPKQYFADHGINVPSFPRDSHSVLFSS 308
            LT +  +    + FS  +  +  + ++  +    A  + Y       VF+ CG G NG  GL  A  LK  G+ P+V++    K  D P        C  +DI + E +PS   L+  F VIVDA+ G  F    +   +  V E L  T+ P+ S+D+PSGWD+ +GP P D  A   I+P++LVSL APKLC+K F G YH + GR +P Q    + + +PS+P     VL S+
Sbjct:   33 LTQKEAMAVDEELFSSYQFSVDQLMELAGLSCAHAVAKFYPALSHTRVFVACGPGNNGGDGLVCARHLKLMGHQPSVYYP---KRTDRPLFHNLVRQCQMYDIDVKEDMPSLHQLDEEFDVIVDALFGFSFKP-PVRAAFVPVIEALSKTKLPVVSVDIPSGWDVESGP-PSDPPA---IQPDMLVSLTAPKLCAKHFTGRYHVLGGRFVPPQLEQKYDLRLPSYPSQQQIVLLSA 260          
BLAST of Gcaud9535.t1 vs. uniprot
Match: A0A1Y1MAN0_PHOPY (NAD(P)H-hydrate epimerase n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MAN0_PHOPY)

HSP 1 Score: 130 bits (327), Expect = 3.940e-32
Identity = 77/236 (32.63%), Postives = 123/236 (52.12%), Query Frame = 0
Query:   80 YLTPELGIEAQRDAFSMAERDILAVADMCAIGFVEAFMQCYNTDDIY--SVFIVCGSGFNGLVGLKSAIMLKEKGYDPAVHF---SHPSKYVDMPSVCSKHDIPLYEFVPSTLEFY-FQVIVDAMLGVGFDGGDIHPPYWEVFEMLISTRRPIASIDVPSGWDLVTGPRPIDRTADTFIKPELLVSLGAPKLCSKVFAGAYHFIAGRHLPKQYFADHGINVPSFPRDSHSVLFSSS 309
            YLT +  I    D F+  +  +  + ++  +    A  QCY  + I   SV + CG G NG  GL  A  LK   Y+ +V++   +    Y ++   C   DIPL   +P + E   + +IVDA+ G  F    +   +  + E++ +T  P+ASID+PSGWD+  G  P     +  +KPELL+SL APKLC+  F G YH++ GR +P    + + +++P +P     +L +SS
Sbjct:   29 YLTQQEAINVDVDLFNEYKYSVDQLMELAGLSCATAIAQCYKPEKINCKSVLVCCGPGNNGGDGLVCARHLKLFNYNVSVYYPKRTDKDLYNNLTHQCEAMDIPLLSELPISNEINKYGLIVDALFGFSFKP-PVRAAFVPIIELMKTTTVPVASIDIPSGWDVENGEPP-----EGGVKPELLISLTAPKLCANKFNGKYHYLGGRFVPPSLESKYNLSLPKYPGTECCILLNSS 258          
BLAST of Gcaud9535.t1 vs. uniprot
Match: A0A7M7LJC4_NASVI (NAD(P)H-hydrate epimerase n=2 Tax=Pteromalinae TaxID=272242 RepID=A0A7M7LJC4_NASVI)

HSP 1 Score: 129 bits (323), Expect = 2.060e-31
Identity = 74/234 (31.62%), Postives = 124/234 (52.99%), Query Frame = 0
Query:   71 NMKQEDFHSYLTPELGIEAQRDAFSMAERDILAVADMCAIGFVEAFMQCY--NTDDIYSVFIVCGSGFNGLVGLKSAIMLKEKGYDPAVHFSHPSK---YVDMPSVCSKHDIPLYEFVPSTLEFY-FQVIVDAMLGVGFDGGDIHPPYWEVFEMLISTRRPIASIDVPSGWDLVTGPRPIDRTADTFIKPELLVSLGAPKLCSKVFAGAYHFIAGRHLPKQYFADHGINVPSFP 298
            N+ + +   YL     I   +D F   +  +  + ++       A  +CY  + D   +V I CG G NG  GL  A  LK  GY P +++   +    Y ++   C ++DIP+ E V    +   ++V+VDA+ G  F    + P +  +  +L ++  PI S+D+PSGW++ TG      T +  IKP++L+SL APKLC++ FAG YH++ GR +PK+    + +N+P +P
Sbjct:   37 NLNKRNMVKYLNQTEAINVDKDLFEKYKFSVDQLMELAGQSCAIAIAKCYPLSADGKNAVLICCGPGNNGGDGLVCARHLKLFGYSPEIYYPKRTNNVLYHNLLHQCIENDIPILEAVTDIKDTKNYKVVVDALFGFSFKP-PVRPDFVPIIGILKNSSAPICSVDIPSGWNVETG-----ATDEGDIKPDMLISLTAPKLCARSFAGRYHYLGGRFVPKKLETTYELNLPEYP 264          
The following BLAST results are available for this feature:
BLAST of Gcaud9535.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2W7_9FLOR1.740e-15763.74NAD(P)H-hydrate epimerase n=1 Tax=Gracilariopsis c... [more]
R7Q1H5_CHOCR1.360e-11959.79YjeF N-terminal domain-containing protein n=1 Tax=... [more]
R7QM21_CHOCR4.330e-8552.57YjeF N-terminal domain-containing protein n=6 Tax=... [more]
R7QQK3_CHOCR1.490e-7762.50YjeF N-terminal domain-containing protein n=4 Tax=... [more]
A0A7S1TJI5_9RHOD3.120e-4836.76Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
R7QKS2_CHOCR7.380e-4468.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A137P1L7_CONC27.890e-3335.15YjeF N-terminal domain-like protein (Fragment) n=1... [more]
A0A2P2HYV2_9CRUS2.700e-3234.75NAD(P)H-hydrate epimerase (Fragment) n=1 Tax=Hiron... [more]
A0A1Y1MAN0_PHOPY3.940e-3232.63NAD(P)H-hydrate epimerase n=1 Tax=Photinus pyralis... [more]
A0A7M7LJC4_NASVI2.060e-3131.62NAD(P)H-hydrate epimerase n=2 Tax=Pteromalinae Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004443YjeF N-terminal domainPFAMPF03853YjeF_Ncoord: 105..266
e-value: 2.9E-18
score: 66.4
IPR004443YjeF N-terminal domainPROSITEPS51385YJEF_Ncoord: 82..298
score: 23.977596
IPR036652YjeF N-terminal domain superfamilyGENE3D3.40.50.10260coord: 79..309
e-value: 3.5E-31
score: 110.3
IPR036652YjeF N-terminal domain superfamilySUPERFAMILY64153YjeF N-terminal domain-likecoord: 80..298
NoneNo IPR availablePANTHERPTHR13232:SF12YJEF N-TERMINAL DOMAIN-CONTAINING PROTEIN 3coord: 105..298
IPR032976YjeF N-terminal domain-containing protein NAXE-likePANTHERPTHR13232NAD(P)H-HYDRATE EPIMERASEcoord: 105..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_766_length_18446_cov_4.656987contigNODE_766_length_18446_cov_4.656987:9918..10979 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9535.t1Gcaud9535.t1Gracilaria caudata M_176_S67 malemRNANODE_766_length_18446_cov_4.656987 9918..10979 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9535.t1 ID=Gcaud9535.t1|Name=Gcaud9535.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=354bp
MALCGNWPRQPINAAFMSPHHLSGRRKNLDCFGQDLVARKRSLAFQAAKY
SRPNVPQMKSDPPQEGSKMDNMKQEDFHSYLTPELGIEAQRDAFSMAERD
ILAVADMCAIGFVEAFMQCYNTDDIYSVFIVCGSGFNGLVGLKSAIMLKE
KGYDPAVHFSHPSKYVDMPSVCSKHDIPLYEFVPSTLEFYFQVIVDAMLG
VGFDGGDIHPPYWEVFEMLISTRRPIASIDVPSGWDLVTGPRPIDRTADT
FIKPELLVSLGAPKLCSKVFAGAYHFIAGRHLPKQYFADHGINVPSFPRD
SHSVLFSSSPIRAFGNGEVYGRPGAFNATLFKKNPRRQWVDIDDHMDLWD
ELD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004443YjeF_N_dom
IPR036652YjeF_N_dom_sf
IPR032976YJEFN_prot_NAXE-like