Gcaud9528.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud9528.t1 vs. uniprot
Match: A0A2V3J232_9FLOR (Ribosome assembly factor mrt4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J232_9FLOR) HSP 1 Score: 383 bits (983), Expect = 1.900e-133 Identity = 185/220 (84.09%), Postives = 209/220 (95.00%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRHDIDQFEHIYVFSTDNMRNAKLKELRSSWNDSRFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHEEVLKFFGSYCEDEFARSGFVATEKVQLKQGPLEGFAPNQEQNLRKVELPVGLKKGVITLLEDFTVCNKGDVLTPERAKVLEFVGIRMAKFRVRLLCHYRKSDAAFEEL 220
MGRSKRERIV LTKTRKHVIGKK+KQDLLEAIR+DIDQ+EHIYVFST+NMRNAKLK+LR++WNDSRFFFGRKKIAQ+ALGRSPEEEY++GL ++SK+LVGNVGLLFTNR H++V+ FF YCEDEFARSGFVATE V L +GPLEGFAPNQEQNLR+VELPVGLKKGVITLL+DFTVC+KGDVLTPERAK LEF+ +RMAKFRV+LLCHYRKSDA+FEEL
Sbjct: 1 MGRSKRERIVTLTKTRKHVIGKKRKQDLLEAIRNDIDQYEHIYVFSTENMRNAKLKQLRATWNDSRFFFGRKKIAQVALGRSPEEEYSEGLGKLSKRLVGNVGLLFTNRAHKDVISFFREYCEDEFARSGFVATEDVHLTKGPLEGFAPNQEQNLRQVELPVGLKKGVITLLQDFTVCSKGDVLTPERAKALEFLHVRMAKFRVKLLCHYRKSDASFEEL 220
BLAST of Gcaud9528.t1 vs. uniprot
Match: A0A7S1ETJ0_9RHOD (Ribosome assembly factor mrt4 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ETJ0_9RHOD) HSP 1 Score: 228 bits (581), Expect = 2.950e-72 Identity = 116/220 (52.73%), Postives = 155/220 (70.45%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRHDIDQFEHIYVFSTDNMRNAKLKELRSSWNDSRFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHEEVLKFFGSYCEDEFARSGFVATEKVQLKQGPLEGFAPNQEQNLRKVELPVGLKKGVITLLEDFTVCNKGDVLTPERAKVLEFVGIRMAKFRVRLLCHYRKSDAAFEEL 220
M RSKR+RIV+L+KT KHVIG++ K L+E IR +D+++ IYVFS +MRNAKLKELR W DSRFF GR K+ Q+ALG+ E+A+ L V+K+L G+VGLLFTNR+H +V +FF SY +FARSG A E V L G L F +Q L+ + +PV L KGVI L+ DFTVC ++LTPE+AK+LE +G + A+F++ LL H+ K+ FE L
Sbjct: 1 MPRSKRQRIVSLSKTGKHVIGREGKHGLIEEIRECVDKYDSIYVFSYQDMRNAKLKELRVEWRDSRFFLGRNKLLQVALGKDAATEHAENLNLVAKRLSGDVGLLFTNREHTQVKEFFESYSASDFARSGARAIETVTLNAGALTQFVASQNDQLQALGMPVQLSKGVIELMGDFTVCEMNEILTPEKAKILELLGYKHAQFKLNLLAHWSKNKG-FETL 219
BLAST of Gcaud9528.t1 vs. uniprot
Match: Q4KTI9_SUBDO (Ribosome assembly factor mrt4 n=1 Tax=Suberites domuncula TaxID=55567 RepID=Q4KTI9_SUBDO) HSP 1 Score: 227 bits (578), Expect = 9.260e-72 Identity = 109/220 (49.55%), Postives = 160/220 (72.73%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRHDIDQFEHIYVFSTDNMRNAKLKELRSSWNDSRFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHEEVLKFFGSYCEDEFARSGFVATEKVQLKQGPLEGFAPNQEQNLRKVELPVGLKKGVITLLEDFTVCNKGDVLTPERAKVLEFVGIRMAKFRVRLLCHYRKSDAAFEEL 220
M +SKR R++ L+KTR G + K LL+ IR +D++ +++V+S DNMRNAKLK+LR+ W DSRFFFG+ ++ Q+ALGRS +EY GL VS+QL G VGL FTN E+V K+F ++ E+++ARSGF++TE++ +GPL F N E LRK+ LP LKKG +TL ED+TVC +GDVL+PE+A++L+ + I+MA F+V L+C + +D +F ++
Sbjct: 1 MPKSKRNRVLTLSKTRSK--GHELKSGLLQEIRDSVDKYANLFVYSIDNMRNAKLKDLRTEWKDSRFFFGKNRVMQLALGRSESDEYKTGLHYVSEQLNGAVGLFFTNEPTEKVEKWFDNFSENDYARSGFISTEEIVCSEGPLTQFTHNMEPQLRKLGLPTALKKGEVTLREDYTVCTEGDVLSPEQARILKLLDIKMASFKVNLICVW-SNDGSFVQM 217
BLAST of Gcaud9528.t1 vs. uniprot
Match: A0A8I6RK59_CIMLE (Uncharacterized protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RK59_CIMLE) HSP 1 Score: 226 bits (575), Expect = 3.420e-71 Identity = 110/213 (51.64%), Postives = 153/213 (71.83%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRHDIDQFEHIYVFSTDNMRNAKLKELRSSWNDSRFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHEEVLKFFGSYCEDEFARSGFVATEKVQLKQGPLEGFAPNQEQNLRKVELPVGLKKGVITLLEDFTVCNKGDVLTPERAKVLEFVGIRMAKFRVRLLCHYRKS 213
M +SKR++ V+LTKT K G + K L+E IR ++Q+++I+VFS +NMRN KLK LR WNDSRFFFG+ K+ + LGR E+E D L ++S +L G GLLFTNR +++V KFF +Y E ++ARSGFVATE V + +GPL F + E LR++ LP LKKGV+TLL D VCN+GDVLTPE+A++L+ + RMA+F++ L+C + K
Sbjct: 1 MPKSKRDKKVSLTKTTKK--GLQAKHSLVEQIRKSVEQYKNIFVFSVENMRNGKLKNLRGDWNDSRFFFGKNKVMTLGLGRKKEDEVEDNLHKLSAKLKGQCGLLFTNRSNDDVTKFFDTYLEKDYARSGFVATETVVVPEGPLPEFPHSMEPQLRQLGLPTSLKKGVVTLLTDHKVCNEGDVLTPEQARILKLLDNRMAQFKISLICMWSKG 211
BLAST of Gcaud9528.t1 vs. uniprot
Match: UPI0009A2C76E (mRNA turnover protein 4 homolog isoform X1 n=2 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A2C76E) HSP 1 Score: 223 bits (569), Expect = 2.680e-70 Identity = 110/220 (50.00%), Postives = 156/220 (70.91%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRHDIDQFEHIYVFSTDNMRNAKLKELRSSWNDSRFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHEEVLKFFGSYCEDEFARSGFVATEKVQLKQGPLEGFAPNQEQNLRKVELPVGLKKGVITLLEDFTVCNKGDVLTPERAKVLEFVGIRMAKFRVRLLCHYRKSDAAFEEL 220
M RS+R++ V+LTKT K G + KQ+L+E +R +D +++++VFS +NMRN KLK++RS+W SRFFFG+ K+ +ALG+ P +EY DGL +VSKQL G VGLLFTNR EV+++F Y E +FAR+G VAT V L GPL F + E LR++ LP LKKGV+TLL D+ VC +G LTPE+A++L+ +G+ MA F+V + C + + FE+L
Sbjct: 1 MPRSRRDKRVSLTKTTKK--GLQVKQNLIEELRKCVDTYKNLFVFSVENMRNNKLKDMRSAWKHSRFFFGKNKVMMVALGKEPADEYKDGLHKVSKQLQGEVGLLFTNRTKVEVIEWFEQYTESDFARAGNVATMAVTLDAGPLPQFTHSLEPQLRQLGLPTSLKKGVVTLLSDYDVCKEGASLTPEQARLLKLLGVEMATFKVTINCMWNSENGEFEQL 218
BLAST of Gcaud9528.t1 vs. uniprot
Match: K4GJE7_CALMI (Ribosome assembly factor mrt4 n=3 Tax=Callorhinchus milii TaxID=7868 RepID=K4GJE7_CALMI) HSP 1 Score: 223 bits (568), Expect = 3.930e-70 Identity = 107/223 (47.98%), Postives = 157/223 (70.40%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRHDIDQFEHIYVFSTDNMRNAKLKELRSSWNDSRFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHEEVLKFFGSYCEDEFARSGFVATEKVQLKQGPLEGFAPNQEQNLRKVELPVGLKKGVITLLEDFTVCNKGDVLTPERAKVLEFVGIRMAKFRVRLLCHYRKSDAAFEELQQM 223
M RS+R++ V+LTKT K G + KQ+L+E +R +D ++H+++FS NMRN KLK++R++W SRFFFG+ K+ +ALG+ P +EY +GL +VSK+L G VGLLFT+R EEV+++F + E++FARSG AT V L GPL F + E LR++ LP LKKGV+ LL D+ VC GD+LTPE+A++L+ +G+ MA+F+V + C + FE+L M
Sbjct: 1 MPRSRRDKKVSLTKTAKK--GLEVKQNLIEELRKCVDTYKHLFIFSIKNMRNNKLKDIRNAWKHSRFFFGKNKVMALALGKGPADEYKEGLHKVSKELSGEVGLLFTSRTKEEVIEWFDQFSENDFARSGNQATMAVTLDAGPLSQFTHSMEPQLRQLGLPTSLKKGVVVLLSDYDVCKAGDILTPEQARLLKLLGLEMAEFKVTISCMWNSETGVFEKLAAM 221
BLAST of Gcaud9528.t1 vs. uniprot
Match: A0A401PAH6_SCYTO (Ribosome assembly factor mrt4 n=5 Tax=Galeoidea TaxID=119195 RepID=A0A401PAH6_SCYTO) HSP 1 Score: 222 bits (565), Expect = 1.160e-69 Identity = 110/220 (50.00%), Postives = 154/220 (70.00%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRHDIDQFEHIYVFSTDNMRNAKLKELRSSWNDSRFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHEEVLKFFGSYCEDEFARSGFVATEKVQLKQGPLEGFAPNQEQNLRKVELPVGLKKGVITLLEDFTVCNKGDVLTPERAKVLEFVGIRMAKFRVRLLCHYRKSDAAFEEL 220
M RS+R++ V+LTKT K G + KQ+L+E +R +D +++++VFS +NMRN KLK++RS+W SRFFFG+ K+ +ALGR P +EY DGL +VSKQL G VGLLFTNR EV+++F Y E FAR+G +AT V L GPL F + E LR++ LP LKKGV+TLL D+ VC +G LTPE+A++L+ +G+ MA F+V + C + FE+L
Sbjct: 1 MPRSRRDKRVSLTKTTKK--GLQIKQNLIEELRKCVDTYKNVFVFSIENMRNNKLKDMRSAWKHSRFFFGKNKVMMVALGREPADEYKDGLHKVSKQLQGEVGLLFTNRTKTEVIEWFDRYTESNFARAGNIATMAVTLDAGPLPQFTHSLEPQLRQLGLPTTLKKGVVTLLSDYDVCKEGASLTPEQARLLKLLGVEMADFKVTINCMWNSETGEFEQL 218
BLAST of Gcaud9528.t1 vs. uniprot
Match: R7QI94_CHOCR (Ribosome assembly factor mrt4 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI94_CHOCR) HSP 1 Score: 219 bits (559), Expect = 1.340e-69 Identity = 106/174 (60.92%), Postives = 131/174 (75.29%), Query Frame = 0
Query: 50 MRNAKLKELRSSWNDSRFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHEEVLKFFGSYCEDEFARSGFVATEKVQLKQGPLEGFAPNQEQNLRKVELPVGLKKGVITLLEDFTVCNKGDVLTPERAKVLEFVGIRMAKFRVRLLCHYRKSDAAFEELQQM 223
MRN LK+LR+ W DSRFF GR KI Q+ALGR EEYADGLRQV+ QL GNVGLLFTNR H+EV+ FF + D++ARSGF ATEKV+L +G LE F +QE +LR + +P+ LKKG + L DFTVC G+ LTPE+AK+LEF+G+RMAKFRV L C+YRK D F+ L +
Sbjct: 1 MRNTILKKLRTEWRDSRFFMGRNKIMQVALGRDEAEEYADGLRQVATQLTGNVGLLFTNRKHKEVVSFFRKFEADDYARSGFEATEKVELAKGELEMFETSQEHSLRLLGMPIVLKKGKVCLSRDFTVCEGGETLTPEKAKILEFLGVRMAKFRVVLRCYYRKKDGHFKLLDDV 174
BLAST of Gcaud9528.t1 vs. uniprot
Match: W5MAE0_LEPOC (Ribosome assembly factor mrt4 n=4 Tax=Lepisosteidae TaxID=7915 RepID=W5MAE0_LEPOC) HSP 1 Score: 221 bits (563), Expect = 3.090e-69 Identity = 107/218 (49.08%), Postives = 155/218 (71.10%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRHDIDQFEHIYVFSTDNMRNAKLKELRSSWNDSRFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHEEVLKFFGSYCEDEFARSGFVATEKVQLKQGPLEGFAPNQEQNLRKVELPVGLKKGVITLLEDFTVCNKGDVLTPERAKVLEFVGIRMAKFRVRLLCHYRKSDAAFE 218
M +SKR++ ++LTKT K G + KQ+L+E +R +D + H+++FS NMRN+KLK++R++W SRFFFG+ K+ IALG+ P +EY D L +VSK L G VGLLFTN+ EEV ++F + E +FAR+G AT V L +GPL+ F+ + E LR++ LP LKKGV+TLL+D+ VC +GD LTPE+A VL+ +GI++A+FRV + C + FE
Sbjct: 3 MPKSKRDKKISLTKTTKK--GLESKQNLIEELRKCVDMYSHLFIFSVANMRNSKLKDIRTAWKHSRFFFGKNKVMMIALGKGPADEYKDNLHKVSKFLRGEVGLLFTNKTKEEVQEYFSHFKEIDFARAGNKATMAVTLDEGPLDQFSHSMEPQLRQLGLPTALKKGVVTLLKDYDVCKEGDTLTPEQATVLKLLGIKLAEFRVTIKCMWNSETGDFE 218
BLAST of Gcaud9528.t1 vs. uniprot
Match: A0A3Q2YE24_HIPCM (Ribosome assembly factor mrt4 n=2 Tax=Syngnathidae TaxID=72045 RepID=A0A3Q2YE24_HIPCM) HSP 1 Score: 219 bits (558), Expect = 1.330e-68 Identity = 109/221 (49.32%), Postives = 155/221 (70.14%), Query Frame = 0
Query: 1 MGRSKRERIVALTKTRKHVIGKKKKQDLLEAIRHDIDQFEHIYVFSTDNMRNAKLKELRSSWNDSRFFFGRKKIAQIALGRSPEEEYADGLRQVSKQLVGNVGLLFTNRDHEEVLKFFGSYCEDEFARSGFVATEKVQLKQGPLEGFAPNQEQNLRKVELPVGLKKGVITLLEDFTVCNKGDVLTPERAKVLEFVGIRMAKFRVRLLCHYRKSDAAFEELQ 221
M +SKR++ ++LTKT K G + KQ L+E +R +D ++++++FS NMRN KLK++R++W SRFFFG+ K+ IA+G+ +EY D L QVSK L G VG+LFTN+ EEV ++F Y E ++ARSG A V L +GPLE F + E LR++ LP LKKGV+TLL+D+TVC GDVLTPE+A++L+ +GI MA+FRV + C + AFE L+
Sbjct: 1 MPKSKRDKKISLTKTAKK--GLESKQKLIEELRKCVDTYKYLFIFSVANMRNNKLKDIRTAWKHSRFFFGKNKVMIIAIGKGETDEYRDNLCQVSKHLRGEVGVLFTNKTKEEVQEYFSHYRETDYARSGNRAQMDVTLDEGPLEQFTHSMEPQLRQLGLPTTLKKGVVTLLKDYTVCKAGDVLTPEQARILKLLGIEMAEFRVTIKCMWSSETGAFEILE 219 The following BLAST results are available for this feature:
BLAST of Gcaud9528.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud9528.t1 ID=Gcaud9528.t1|Name=Gcaud9528.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=227bpback to top |