Gcaud9488.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9488.t1
Unique NameGcaud9488.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length305
Homology
BLAST of Gcaud9488.t1 vs. uniprot
Match: A0A2V3J5U4_9FLOR (ERAD-associated E3 ubiquitin-protein ligase HRD1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5U4_9FLOR)

HSP 1 Score: 448 bits (1152), Expect = 2.720e-149
Identity = 229/294 (77.89%), Postives = 259/294 (88.10%), Query Frame = 0
Query:    1 MPNVASFKFYVFFSVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRT 294
            +P + SF+ Y FFS+ LSAAVL+HA+Y+K+FFYRTVVYLS SKLAIM  ANMALVSILL+WR+ QLIFLGPLRFRELERL  RARD IIEYCFAISVFRDDFN  FVAL+MTVLLLKSLHWLAKDRTD+LEEQ   P RTH+RLVGLL+LL  LDCFLA  C+  T  SNGRSMYVLFSFEFTLL IELA+NVFQY+F LIDQRM GRW SKG+F+FYA+LLCD+STLT YI+F +YV +YYSFP+HI+RE YVTLSKFQR+C DFLRYRRVVAN++EVVEEV+EEELQQGDRT
Sbjct:    3 LPFITSFRGYAFFSILLSAAVLTHAVYTKRFFYRTVVYLSHSKLAIMATANMALVSILLVWRIIQLIFLGPLRFRELERLQLRARDAIIEYCFAISVFRDDFNYRFVALVMTVLLLKSLHWLAKDRTDFLEEQPLSPFRTHMRLVGLLILLCSLDCFLAVTCVRITFNSNGRSMYVLFSFEFTLLLIELASNVFQYVFLLIDQRMQGRWESKGLFTFYADLLCDMSTLTFYIIFLVYVHLYYSFPFHILRELYVTLSKFQRRCTDFLRYRRVVANMNEVVEEVTEEELQQGDRT 296          
BLAST of Gcaud9488.t1 vs. uniprot
Match: R7QRC3_CHOCR (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRC3_CHOCR)

HSP 1 Score: 335 bits (858), Expect = 1.790e-104
Identity = 168/291 (57.73%), Postives = 227/291 (78.01%), Query Frame = 0
Query:    4 VASFKFYVFFSVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRT 294
            + +F+ YVF S+ L+ AV+ HA+Y K FFYR+V+YLS+SK+A++   NMAL S LL+WR+ Q +FLGPLRFRE+ERLH RARD +IE CFAISVFR+D +  FVA  MT+LLLKSLHWL+KDR ++LEEQ   P+RTH+RLVGL+  L  LD FL       TL + G +MYVLF+FE+T++ IEL +++ +Y+F +ID+ M+G W  K ++SFY ELL DL  LT+Y++FFIYVQ +YS P+HIIRE +VT SKF+R+C+DFLRYRRVVA ++++  + +EEEL +GDRT
Sbjct:    2 LTTFRGYVFASMLLTVAVIGHALYLKHFFYRSVIYLSKSKIAVLAVGNMALASALLLWRVLQAVFLGPLRFREVERLHIRARDAVIECCFAISVFREDLDARFVAFFMTLLLLKSLHWLSKDRIEFLEEQPLTPVRTHLRLVGLMSALLVLDIFLVQRFATITLTTEGATMYVLFAFEYTIIVIELLSDIVKYVFLVIDRSMEGHWEEKNMYSFYIELLSDLCQLTVYVLFFIYVQYFYSMPFHIIREVWVTFSKFRRRCSDFLRYRRVVATMNDLFADATEEELVEGDRT 292          
BLAST of Gcaud9488.t1 vs. uniprot
Match: A0A7S0ZHY2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZHY2_9RHOD)

HSP 1 Score: 253 bits (647), Expect = 4.270e-79
Identity = 135/290 (46.55%), Postives = 191/290 (65.86%), Query Frame = 0
Query:    5 ASFKFYVFFSVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRT 294
            ASF  YV  S   S  V+ HA   K++FY  VVYL++SK+A +   N  +V +LL+ +  Q +FLGPLRFRE ERL  R R+ +IE C A++VFR++FN+ F+ L   +L LK  HWL++DR +Y+EEQ   PL  H RL+ L+ +L  LD  L   C   T+Q  G S  VLF+FEF +L I L + + +Y     D  ++GRW +KG+ SFY ELLCD S L +YI FF+YVQ +Y+ P HIIR+ Y+T +KF ++C DFLRYRRV ++++E+  + +E++   GDRT
Sbjct:    4 ASFGSYVLMSFVSSLLVVIHAFSLKRYFYNAVVYLTKSKIATVVLGNCGVVCLLLVGKFMQAVFLGPLRFREEERLQVRIREAVIESCLAMTVFREEFNSKFIGLFAVLLFLKIFHWLSRDRVEYMEEQPNAPLLAHARLISLMAVLFALDIRLVVSCATYTMQ-YGPSFLVLFAFEFAVLSISLISTITRYGLNSADSYLEGRWDAKGMISFYNELLCDASQLIVYIAFFLYVQAFYTLPLHIIRDIYLTFTKFHKRCVDFLRYRRVASSMNELFPDATEQDFSDGDRT 292          
BLAST of Gcaud9488.t1 vs. uniprot
Match: A0A5J4YLY9_PORPP (ERAD-associated E3 ubiquitin-protein ligase HRD1B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLY9_PORPP)

HSP 1 Score: 241 bits (616), Expect = 1.060e-71
Identity = 121/273 (44.32%), Postives = 191/273 (69.96%), Query Frame = 0
Query:   21 VLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDR 293
            V+ +A ++K++FY + V+L+RSK++ +   N  + S+L++ ++ Q +FLGPLRFRE ERL  R RD +IE C A++VFRD+F+  F  +   +L +K  HWL++DR + +EEQL  P+RTH++LV L+++L   D ++   CI  T+ + G SM VLF+FEF +L + L + + +Y F +ID R DG W +KG+ SFY EL+ D   L +YI FF+YVQ +Y+ P HIIR+ Y+T +KFQ++ +DF+RYR+V + ++E+  E +EE+ +Q DR
Sbjct:   19 VVVYAFHTKRYFYASTVFLARSKVSTLALTNAIVASVLVLGKVIQSVFLGPLRFREQERLQIRVRDAVIETCLAMTVFRDEFDAKFFGMFAVLLFVKVFHWLSRDRVENMEEQLLVPVRTHMKLVFLMLMLLLTDVYVLVQCISITV-TKGPSMLVLFTFEFAVLLLWLVSTMVRYAFQVIDARYDGHWEAKGLCSFYNELISDFLQLVVYIAFFMYVQAFYTLPLHIIRDIYLTFNKFQKRVSDFIRYRKVASTMNELFSEPTEEDFEQMDR 290          
BLAST of Gcaud9488.t1 vs. uniprot
Match: A0A7S1TGM3_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TGM3_9RHOD)

HSP 1 Score: 238 bits (606), Expect = 1.240e-69
Identity = 131/283 (46.29%), Postives = 183/283 (64.66%), Query Frame = 0
Query:   14 SVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVF---RDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDR 293
            S  L  A + +A + K++FY +V YL  SK+A +   N+ L +++L+ ++ Q IFLG LRFRE ERL  R R+ ++E C A+SVF   R DF+  F+  +  +L +K+ HWLAKDR D++EEQ   PLR+H+RL  LL+     D  L    I      N   + VLF+FEFTLLFI ++ N  +YI  LID +MDGRW  +  FSFYAEL+ D+S L +Y+ FF+YV  +YS P HIIR+ Y+T S FQR+C DFLRYR+V+  ++E+    +EEEL   DR
Sbjct:   12 SYILGIATVWYAFHLKRWFYNSVGYLVESKVATLILGNVYLATVVLVGKMVQWIFLGQLRFRETERLQIRMREAVVETCLAMSVFKFDRTDFDARFLLFLSILLFMKTFHWLAKDRVDFMEEQPLVPLRSHLRLTFLLLXXXXXDLVLLYWSIIYGALRNQYPILVLFTFEFTLLFITISWNAVRYILLLIDLKMDGRWDDRSTFSFYAELVADVSQLLVYMAFFVYVLFHYSLPLHIIRDIYITFSNFQRRCNDFLRYRKVLNEMNELFPNATEEELDAADR 294          
BLAST of Gcaud9488.t1 vs. uniprot
Match: A0A1X6NM01_PORUM (RING-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM01_PORUM)

HSP 1 Score: 232 bits (591), Expect = 2.720e-66
Identity = 124/289 (42.91%), Postives = 188/289 (65.05%), Query Frame = 0
Query:    6 SFKFYVFFSVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRT 294
            +F  Y+  S+ ++AAV  HA Y  ++ YRT+V+L  SK A +   NM L ++L+  +  Q +FLG LRFRE+ERL+ R R+ +IE C A++VFRDDFNT F+ +   +L LK  HWLAKDR ++LEEQ   P  T++RL+ L+++L  +D  L   C+  TL+  G +M  LF+FEFT+L IEL +++ ++   ++D    GRW  K + +FYAEL+ D   L +Y+ FF++V  +Y  P HI+R+ YV  ++ QR+  DF+RYRRVVA + ++  + + EEL   D T
Sbjct:    4 TFPSYLALSMAVTAAVCGHATYMHRYLYRTMVHLESSKFATLALGNMLLATVLVAGKTVQRLFLGSLRFREVERLYLRIREAVIETCLAMTVFRDDFNTNFILMFGMLLFLKVFHWLAKDRIEFLEEQPLSPRSTYVRLLCLMLMLFSVDARLLIACLHYTLE-YGHTMVALFAFEFTVLLIELCSHIVRFTLHVVDVACAGRWEGKAMVAFYAELVADALQLVVYVAFFVHVLTFYPLPIHILRDLYVAATRLQRRVFDFMRYRRVVATMSQLFADATPEELAAADAT 291          
BLAST of Gcaud9488.t1 vs. uniprot
Match: A0A2I0VT28_9ASPA (E3 ubiquitin protein ligase RIN2 n=3 Tax=Epidendroideae TaxID=158332 RepID=A0A2I0VT28_9ASPA)

HSP 1 Score: 208 bits (530), Expect = 6.060e-60
Identity = 110/285 (38.60%), Postives = 179/285 (62.81%), Query Frame = 0
Query:   10 YVFFSVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRT 294
            Y  FS   + A + HA  S+  FY  +VYLS SK+  +   NM LV + + W+L +  FLG LR  E+ERL+ ++   ++E  FAI++FR DF+ +F+A++  +LL+K+LHWLA+ R +Y+E     P  +HIR+V  +  L  +DC    I ++S +Q+   S+++ F+FE+T+L     +   +Y+F++ D  M+G+W +K V++FY EL+ DL  L+IYIVFF+ +   Y  P H+IRE Y T   F+ + AD++RYR++ +N++E   + + EEL   D T
Sbjct:    6 YAAFSFLATTAAVYHAFSSRGQFYPAMVYLSTSKICFVLLLNMGLVMMCITWQLVKRFFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVMFLAMVTALLLIKALHWLAQKRVEYIETTPAVPKLSHIRIVSFMGFLLLVDCLFLFISLKSLIQTWEASVFLFFAFEYTILATTTISTFVKYVFYVSDMLMEGQWENKAVYTFYLELVRDLLHLSIYIVFFLVIFASYGVPLHLIRELYETFRSFRMRVADYIRYRKITSNMNERFPDATAEELNASDAT 290          
BLAST of Gcaud9488.t1 vs. uniprot
Match: UPI001CB96CE7 (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB96CE7)

HSP 1 Score: 209 bits (531), Expect = 1.130e-59
Identity = 109/281 (38.79%), Postives = 178/281 (63.35%), Query Frame = 0
Query:   14 SVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRT 294
            SV  + AV+ HA  S+  FY   VYLS SK+ ++   NM LV + ++W+LT+ IFLG LR  E+ERL+ ++   ++E  FAI++FR DF+ +F+A++  +LL+KSLHWLA+ R +Y+E     P  +HIR+V  +  L  LDC      ++  +Q+   S+ + FSFE+T+L     +   +Y+F++ D  M+G+W  K V++FY EL+ DL  L++Y+ FF+ + + Y  P H+IRE Y T   F+ + AD++RYR++ +N+++   + + EEL   D T
Sbjct:   11 SVVATLAVIYHAFSSRGQFYPATVYLSTSKVCLVLLLNMGLVIMCIMWQLTKRIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVMFLAMVTALLLIKSLHWLAQKRVEYIETTPTVPTLSHIRIVSFMGFLLLLDCLFLYNSVKYLIQTRQASVSLFFSFEYTILATTTMSTFVKYVFYVSDMLMEGQWEKKAVYTFYLELIRDLIHLSLYLCFFLVIFVNYGVPLHLIRELYETFRNFKLRIADYIRYRKITSNMNDRFPDATSEELNASDAT 291          
BLAST of Gcaud9488.t1 vs. uniprot
Match: A0A2U1PZY5_ARTAN (Zinc finger, RING/FYVE/PHD-type n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1PZY5_ARTAN)

HSP 1 Score: 208 bits (530), Expect = 1.400e-59
Identity = 109/281 (38.79%), Postives = 178/281 (63.35%), Query Frame = 0
Query:   14 SVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRT 294
            SV  + AV+ HA  S+  FY   VYLS SK+ ++   NM LV + ++W+LT+ IFLG LR  E+ERL+ +A   ++E  FAI++FR DF+ +F+A++  +LL+KSLHWLA+ R DY+E     P+ +HIR+V  +  L  +DC      ++  +Q+   S+ + FSFE+ +L     +   +Y+F++ D  M+G+W  K V++FY EL+ DL  L++Y+ FF+ + + Y  P H+IRE Y T   F+ + AD++RYR++ +N+++   + + EEL   D T
Sbjct:   11 SVIATLAVIYHAFSSRGQFYPATVYLSTSKVCLVLLLNMGLVIMCIMWQLTKKIFLGSLREAEVERLNEQAWREVMEILFAITIFRQDFSVMFLAMVTALLLIKSLHWLAQKRVDYIETTPTVPMLSHIRIVSFMGFLLLVDCLFLYNSVKYLIQTRQASVSLFFSFEYMILATTTISTFVKYVFYVSDMLMEGQWEKKAVYTFYLELIRDLLHLSMYLCFFLAIFVNYGVPLHLIRELYETFRNFKLRIADYIRYRKITSNMNDRFPDATPEELNASDAT 291          
BLAST of Gcaud9488.t1 vs. uniprot
Match: A0A6P5ZIX8_DURZI (ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1 n=2 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5ZIX8_DURZI)

HSP 1 Score: 207 bits (526), Expect = 3.560e-59
Identity = 107/275 (38.91%), Postives = 177/275 (64.36%), Query Frame = 0
Query:   20 AVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRT 294
            AV+ HA  S+  FY  +VYLS SK++++   NM LV + ++W+LT+ +FLG LR  E+ERL+ ++   I+E  FAI++FR DF+ +F+A++  +LL+K+LHW+A+ R +Y+E     P+ +HIR+V  L  L  LDC      I+  +Q+   S+ + FSFE+ +L     A   +Y+F++ D  M+G+W  K V++FY EL+ DL  L++Y+ FF+ + + Y  P H+IRE Y T   F+ + AD++RYR++ +N+++   + + EEL   D T
Sbjct:   17 AVIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVFMCILWQLTKRVFLGSLREAEVERLNEQSWREIMEILFAITIFRQDFSVIFLAMVTGLLLIKALHWMAQKRVEYIETTPSVPMLSHIRIVSFLGFLLLLDCLFLYSSIKFLIQTRQASVSLFFSFEYMILVTTTVATFVKYVFYVSDMLMEGQWEKKAVYTFYLELIRDLLHLSLYLCFFLVIFMNYGIPLHLIRELYETFRNFKIRVADYMRYRKITSNMNDRFPDATPEELTASDAT 291          
The following BLAST results are available for this feature:
BLAST of Gcaud9488.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5U4_9FLOR2.720e-14977.89ERAD-associated E3 ubiquitin-protein ligase HRD1 n... [more]
R7QRC3_CHOCR1.790e-10457.73RING-type domain-containing protein n=1 Tax=Chondr... [more]
A0A7S0ZHY2_9RHOD4.270e-7946.55Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4YLY9_PORPP1.060e-7144.32ERAD-associated E3 ubiquitin-protein ligase HRD1B ... [more]
A0A7S1TGM3_9RHOD1.240e-6946.29Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A1X6NM01_PORUM2.720e-6642.91RING-type domain-containing protein n=1 Tax=Porphy... [more]
A0A2I0VT28_9ASPA6.060e-6038.60E3 ubiquitin protein ligase RIN2 n=3 Tax=Epidendro... [more]
UPI001CB96CE71.130e-5938.79ERAD-associated E3 ubiquitin-protein ligase HRD1B-... [more]
A0A2U1PZY5_ARTAN1.400e-5938.79Zinc finger, RING/FYVE/PHD-type n=1 Tax=Artemisia ... [more]
A0A6P5ZIX8_DURZI3.560e-5938.91ERAD-associated E3 ubiquitin-protein ligase HRD1B-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22765:SF288ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE HRD1Bcoord: 10..278
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 10..278
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 123..141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 217..242
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 198..216
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..122
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 164..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..197
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 243..304
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..163
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availableTMHMMTMhelixcoord: 144..163
NoneNo IPR availableTMHMMTMhelixcoord: 104..123
NoneNo IPR availableTMHMMTMhelixcoord: 221..243
NoneNo IPR availableTMHMMTMhelixcoord: 178..200
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 10..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_998_length_15307_cov_4.891167contigNODE_998_length_15307_cov_4.891167:12534..13548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9488.t1Gcaud9488.t1Gracilaria caudata M_176_S67 malemRNANODE_998_length_15307_cov_4.891167 12534..13548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9488.t1 ID=Gcaud9488.t1|Name=Gcaud9488.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=305bp
MPNVASFKFYVFFSVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAA
NMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRD
DFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLML
LAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFL
IDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIR
EFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRTSARRAE
PLSM*
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