Gcaud9479.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9479.t1
Unique NameGcaud9479.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length411
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud9479.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 130..410
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..111
NoneNo IPR availableTMHMMTMhelixcoord: 80..102
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 53..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_318_length_30347_cov_4.399028contigNODE_318_length_30347_cov_4.399028:2837..4069 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9479.t1Gcaud9479.t1Gracilaria caudata M_176_S67 malemRNANODE_318_length_30347_cov_4.399028 2837..4069 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9479.t1 ID=Gcaud9479.t1|Name=Gcaud9479.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=411bp
MRPDIFLLETSSRSLRQTNKELEIIIVCLSYSFAILSVILRFATQVNPKE
PLTAPIGNLLLNITSILISFSALLLASIKIISLDALAAATIGLLPALGSF
RHVKFTQLQLRWSIFRIVYGGTDGIFFFYQHLFRKNSSNGLQIVYYPYQT
ALTRRIQRFQRFVRLFSFSHSGKQAQNLSRFLKDDNCAQKYEILDSDEFW
AGQVVSIGNQSSDAREPKLVVIRHYGSTWFAVEKILAGHSLLTHPSNVQA
GNSRSVLRGLCALTEIVLIGDLCRLFFAKNIEKEFETIRTKKNHQLAISF
CNETFRQTGLDKLWQFTINEREERFPKCSQKRYGLFRTLFIVLTFHSKLF
MQVKCPWENVHNALRNGANGQSMFVLKRCVRRWLRSYGFDMELQDSNVRL
ESAAGLKTSA*
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