Gcaud9475.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9475.t1
Unique NameGcaud9475.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length410
Homology
BLAST of Gcaud9475.t1 vs. uniprot
Match: A0A2V3J5K7_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K7_9FLOR)

HSP 1 Score: 175 bits (444), Expect = 2.860e-46
Identity = 141/455 (30.99%), Postives = 207/455 (45.49%), Query Frame = 0
Query:   23 SRVAYPSDIRAQFLLQE--ATDDSPLCPLNITHTTW-SVGPSGHIELPHNTIIHDDVRCNSNGREKVLVFYESDNYNVDLSPKSADVPKLPDTLIDVVAVSGFNIDALHAGFAQNENFLIGYEQQARYCDAGGNWLSDTTVFLYRPFKTFVVKNLNTQLQPGYKYMLVVPRYSSVYCLYSA------RVP-----------GHPVAEPVDAADIE------ESKEPELRXXXXXXXXXXXXXXXXXXXXXLSSPEMTL--NGS-----ETVEMEPVPLPANGRELDEEPTASAEESESESDPACFPADATVRTAHGVK-RMADVQIGDFVATRDGQFSRVFAFTHRDQHVRAKFVVLNMENGMQLA-------------------------------------------------TESGEILVDGVVATTYTRAVDMEVAHALLMPFRAMACVAR 394
            SR+A  +DI A + L E   + ++ +CP +ITHTTW ++ PS +  L H TI+ + +RC+  G  + L+FY S  Y  +L+P + +  KLPD +  ++   G N     A  A  E FLIGYE   R+C     + + TT +L RPF+ F + N+ T+  PG KY+L+VP  S   C+YSA      +VP           G    EP+D A  +      ES EP+                             T+  +GS     ET E E  P   +G  ++  P ++  ESE + D  CFP  A+V    G   RM  +++GD V      +SR+FAF+HRD HV+  F  L   +G  ++                                                 T  G+I+V+GVVA+TYT++V   VAHA L P RA++ V R
Sbjct:   28 SRLATAADIEANWNLVENAGSTNASICPRSITHTTWMALSPSSYA-LDHPTILVNRIRCDGAGSRRQLIFYSSSAYFRNLTPMTPETSKLPDRMRQIITAPGTNARIFSAIHATGEQFLIGYESTNRFCKGTTYFENGTTAYLARPFQPFTIPNVTTKFIPGSKYLLMVPFASRATCVYSAALNTTVQVPVTTSPQTPEPEGEETLEPIDVASAQPAEGETESVEPDDEEDLLSGDGQTGTPSAEVGANPTPDGSATIIDDGSGQADGETTEEEGEP---DGSAVETSPAST--ESEDDDD-VCFPESASVTLLDGSSARMWQLEVGDEVLVGPNTYSRIFAFSHRDAHVKKLFYTLYTSSGHAISATQGHFIYANNAAIPIERVQVGQSLRTITGSGVVVKVDRQWMKGLYNPQTVQGDIIVNGVVASTYTKSVVPAVAHAALAPLRAISTVCR 475          
BLAST of Gcaud9475.t1 vs. uniprot
Match: A0A2V3IY57_9FLOR (Warthog protein 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY57_9FLOR)

HSP 1 Score: 73.6 bits (179), Expect = 9.510e-11
Identity = 52/149 (34.90%), Postives = 68/149 (45.64%), Query Frame = 0
Query:  290 DPACFPADATVRTAHG-VKRMADVQIGDFVATRDGQFSRVFAFTHRDQHVRAKFVVLNMEN-------------------------GMQLA------------------------TESGEILVDGVVATTYTRAVDMEVAHALLMPFRA 388
            D  CFPADA+VR   G V+ ++ + IGD V     +FS VFA+TH D H + +FV L+  +                         GM+L                         T  G+I+VDG+VATTYT AV +  AHALL P RA
Sbjct:  181 DRVCFPADASVRLQDGSVRTVSQLSIGDHVQVSHAKFSPVFAWTHADAHTKYRFVQLSTPSTSITLTPSHYIYADDVIRPAKSVTLGMKLRLHDGSQQQVIGKKYVWKTGLYNPQTVDGDIVVDGIVATTYTTAVQINAAHALLAPLRA 329          
BLAST of Gcaud9475.t1 vs. uniprot
Match: A0A2V3IX71_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX71_9FLOR)

HSP 1 Score: 70.5 bits (171), Expect = 1.710e-9
Identity = 64/202 (31.68%), Postives = 85/202 (42.08%), Query Frame = 0
Query:  247 LSSPEMTLNGSETVEMEPVPLPANGRE---------LDEEPTASAEESESESDPACFPADATVRTAHG-VKRMADVQIGDFVATRDGQFSRVFAFTHRDQHVRAKFVVLNMENGMQLA--------------------------------------------------TESGEILVDGVVATTYTRAVDMEVAHALLMPFRA 388
            L S   T++  E+V   P P P +G +         LD    AS    + + D  CFPADATV+   G  K+M DVQ+GD V    G FS VF FTH+   VR  FV +   +G  L+                                                  T  G+I+V+G+ A+TYT AV+  +AHALL P RA
Sbjct:  256 LPSAVTTISPVESVLPLPSPSPVDGTDTLPGIIGEGLDSTDAASPS-PDDDDDAVCFPADATVQLEDGSAKKMGDVQLGDRVMVDHGIFSPVFMFTHKLSTVRYGFVNIQTSSGNTLSLTPGHYLYVNGHLSAASTVKNGDTLMLADSSLTDVTQVSTVTSTGLFNPQTLHGDIVVNGLKASTYTTAVEPGLAHALLSPLRA 456          
BLAST of Gcaud9475.t1 vs. uniprot
Match: R7Q619_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q619_CHOCR)

HSP 1 Score: 68.2 bits (165), Expect = 2.200e-9
Identity = 48/158 (30.38%), Postives = 68/158 (43.04%), Query Frame = 0
Query:  283 EESESESDPACFPADATVRTAHGV-KRMADVQIGDFVATRDGQFSRVFAFTHRDQHVRAKFVVLNMENGMQLA--------------------------------------------------TESGEILVDGVVATTYTRAVDMEVAHALLMPFRAM 389
            +E E + D  CFPA+A V   +G  K M+ VQ+GD V      FS VF FTH+   ++  FV L  ++G  L+                                                  T  G+I+V+G++ATTYT  V+  +AHALL P RA+
Sbjct:   59 DEGEDDDDSVCFPANALVELENGATKMMSQVQLGDRVRVGPNDFSDVFMFTHKTAAIKYSFVTLATQSGHTLSLTKGHYLYVNGVVAAAKTVRSGDFITLADGTTSSVTQVGTEIARGLYNPQTVHGDIIVNGLLATTYTTTVERSMAHALLAPLRAV 216          
BLAST of Gcaud9475.t1 vs. uniprot
Match: A0A2V3IFE6_9FLOR (Sonic hedgehog protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE6_9FLOR)

HSP 1 Score: 65.9 bits (159), Expect = 4.450e-8
Identity = 61/186 (32.80%), Postives = 78/186 (41.94%), Query Frame = 0
Query:  254 LNGSETVEMEPVPLPANGRELDEEPTASAEESESESDPACFPADATVRTAHG-VKRMADVQIGDFVATRDGQFSRVFAFTHRDQHVRAKFVVLNME--------------NGMQLA-----------------------------------TESGEILVDGVVATTYTRAVDMEVAHALLMPFRAM 389
            +N  +TV +    LP   +E  E   A+AE+ +  +   CFPAD TV    G VK MA V IGD V      FS VF FTHR Q     FV +  +              NG+  A                                   T SG+I+V+G+ A+TYT  VD   AH LL PFRA+
Sbjct:  208 INDGDTVGVPVTVLPGVPKESAE---ATAEDDDGST---CFPADTTVELEDGSVKEMAQVNIGDRVRVGRSMFSEVFMFTHRLQDGENYFVKIETDSSGISLTKGHYLFVNGVLAAAKTVQVGDLVELASGETATVRAVKKVKGTGLYNPQTISGDIVVNGIRASTYTTTVDPAFAHRLLTPFRAL 387          
BLAST of Gcaud9475.t1 vs. uniprot
Match: A0A2V3IGP9_9FLOR (Warthog protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGP9_9FLOR)

HSP 1 Score: 65.9 bits (159), Expect = 5.230e-8
Identity = 51/158 (32.28%), Postives = 68/158 (43.04%), Query Frame = 0
Query:  283 EESESESD-PACFPADATVRTAHG-VKRMADVQIGDFVATRDGQFSRVFAFTHRDQHVRAKFVVLNMENGMQLA-------------------------------------------------TESGEILVDGVVATTYTRAVDMEVAHALLMPFRAM 389
            EE E E D  ACFPA ATV    G  K M  +++GD V    G+FS VF FTH+   +   FV L   +G  L                                                  T +G I+V+GV A+TYT AV+++ AH+LL+P RA+
Sbjct:  295 EEEEGEDDGSACFPAHATVELEDGSFKTMDSIELGDRVKVASGEFSPVFMFTHKMAGISYSFVRLTASSGHSLELTKGHYLYVNGDLAAAESVHVGDSIETDAGVVSVSAVARVVSRGLYNPQTVNGNIVVNGVRASTYTTAVEIKTAHSLLLPLRAV 452          
BLAST of Gcaud9475.t1 vs. uniprot
Match: A0A1X6NWZ1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWZ1_PORUM)

HSP 1 Score: 65.9 bits (159), Expect = 6.550e-8
Identity = 53/162 (32.72%), Postives = 66/162 (40.74%), Query Frame = 0
Query:  287 SESDPACFPADATVRTAHGVK-RMADVQIGDFVATRDGQFSRVFAFTHRDQHVRAKFV------------------------VLNMENGMQLA----------------------------------TESGEILVDGVVATTYTRAVDMEVAHALLMPFRAM 389
            S +  ACFPADATV  A G   RM  + +GD VA   G+FS VFAFTH D    + FV                         L++  G+  A                                  T  G ILVDG+V +TYT AV+  +AHA L P RA+
Sbjct:  468 SNATAACFPADATVTLASGAAVRMDALAVGDAVAVGGGRFSEVFAFTHADAAAVSAFVELTVASPADACAAHPTSLRLTPGHYLSVNGGLAAASTVVVGDRLVRADGSAAVVTQVSAARRAGLYNPQTVDGAILVDGIVTSTYTTAVEPRLAHAALAPLRAL 629          
BLAST of Gcaud9475.t1 vs. uniprot
Match: R7Q8Q4_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8Q4_CHOCR)

HSP 1 Score: 62.8 bits (151), Expect = 3.280e-7
Identity = 47/147 (31.97%), Postives = 61/147 (41.50%), Query Frame = 0
Query:  293 CFPADATVRTAHG-VKRMADVQIGDFVATRDGQFSRVFAFTHRDQHVRAKFVVLNMENGMQLATESG--------------------------------------------------EILVDGVVATTYTRAVDMEVAHALLMPFRA 388
            CFPADATV    G VK M  V+IGD V   DG +S VFA+TH        ++ +  + G +L T +G                                                  +I+V+G++ATTYT AV    AHALL P RA
Sbjct:  178 CFPADATVTLQSGQVKTMDTVRIGDRVLVADGTYSDVFAWTHHTSKSALSYIAVETDLGNRLVTTAGHYVHADGATLQMRDVRKGMVMRTAEGADATVTAVRTVKAKGLYNPQTTHGDIVVNGLIATTYTDAVQPGAAHALLAPVRA 324          
BLAST of Gcaud9475.t1 vs. uniprot
Match: A0A7S3AAJ1_9RHOD (Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S3AAJ1_9RHOD)

HSP 1 Score: 60.8 bits (146), Expect = 4.360e-7
Identity = 45/149 (30.20%), Postives = 65/149 (43.62%), Query Frame = 0
Query:  290 DPACFPADATVRTAHG-VKRMADVQIGDFVATRDGQFSRVFAFTHRDQHVRAKFV----------------------------------VLNMENGMQLA----------------TESGEILVDGVVATTYTRAVDMEVAHALLMPFR 387
            +P CFP DA+V  A G +K M ++Q+GD V     ++S V+ F H+D    A+F+                                  VL +  G ++A                T +G+I+V+GV A+TYTR V  E AH LL P R
Sbjct:   31 EPICFPGDASVELADGSMKTMRELQVGDSVRVGASEYSDVYFFGHKDSFGSAEFITIEGRDSVSISLSSLHYLYVNGSLVSAEEVKEGDVLELSTGEKMAVTDVRKEMKIGVFAPHTLNGDIVVNGVRASTYTRVVHPEFAHLLLAPLR 179          
BLAST of Gcaud9475.t1 vs. uniprot
Match: A0A2V3III2_9FLOR (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3III2_9FLOR)

HSP 1 Score: 61.2 bits (147), Expect = 1.760e-6
Identity = 48/151 (31.79%), Postives = 66/151 (43.71%), Query Frame = 0
Query:  292 ACFPADATVRTAHGVKRMADVQIGDFVATRDGQFSRVFAFTHRDQHVRAKFVVLNMENGMQLA----------------------------------------------------TESGEILVDGVVATTYTRAVDMEVAH-ALLMPFRAM 389
            ACFPA A V ++ G   M D++IGD V T +G +S V  FTHR +     FV L+ ++G +L                                                     TESG I+V+G + +TYT AV+ ++AH ALLMP R M
Sbjct:  373 ACFPASARVYSSRGTVPMQDLKIGDRVKTANG-YSDVIMFTHRSRSTIHTFVKLHTQSGRELTVTGGHYVYKQNGDLAAAATVSVSDVLRMANASEDGTIMKIEKVSGIGLYNPQTESGSIVVNGFITSTYTTAVEPKLAHMALLMPVRFM 522          
The following BLAST results are available for this feature:
BLAST of Gcaud9475.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A2V3J5K7_9FLOR2.860e-4630.99Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A2V3IY57_9FLOR9.510e-1134.90Warthog protein 8 n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A2V3IX71_9FLOR1.710e-931.68Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
R7Q619_CHOCR2.200e-930.38HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IFE6_9FLOR4.450e-832.80Sonic hedgehog protein n=1 Tax=Gracilariopsis chor... [more]
A0A2V3IGP9_9FLOR5.230e-832.28Warthog protein 6 n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A1X6NWZ1_PORUM6.550e-832.72Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7Q8Q4_CHOCR3.280e-731.97HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A7S3AAJ1_9RHOD4.360e-730.20Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 ... [more]
A0A2V3III2_9FLOR1.760e-631.79Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 291..386
e-value: 0.008
score: 23.0
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 293..355
e-value: 2.2E-13
score: 52.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..292
NoneNo IPR availablePANTHERPTHR46706:SF10WARTHOG PROTEIN 6coord: 233..388
NoneNo IPR availablePANTHERPTHR46706FAMILY NOT NAMEDcoord: 233..388
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..409
NoneNo IPR availableCDDcd00081Hintcoord: 293..388
e-value: 3.30363E-6
score: 44.1822
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 282..353
e-value: 3.6E-11
score: 43.0
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 293..354

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3539_length_3299_cov_4.322943contigNODE_3539_length_3299_cov_4.322943:1317..2845 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9475.t1Gcaud9475.t1Gracilaria caudata M_176_S67 malemRNANODE_3539_length_3299_cov_4.322943 1317..2845 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9475.t1 ID=Gcaud9475.t1|Name=Gcaud9475.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=410bp
MRVALLFSVFVPLACSLHVRTTSRVAYPSDIRAQFLLQEATDDSPLCPLN
ITHTTWSVGPSGHIELPHNTIIHDDVRCNSNGREKVLVFYESDNYNVDLS
PKSADVPKLPDTLIDVVAVSGFNIDALHAGFAQNENFLIGYEQQARYCDA
GGNWLSDTTVFLYRPFKTFVVKNLNTQLQPGYKYMLVVPRYSSVYCLYSA
RVPGHPVAEPVDAADIEESKEPELREEPKEAKEPQEAEEPNVSDEPLSSP
EMTLNGSETVEMEPVPLPANGRELDEEPTASAEESESESDPACFPADATV
RTAHGVKRMADVQIGDFVATRDGQFSRVFAFTHRDQHVRAKFVVLNMENG
MQLATESGEILVDGVVATTYTRAVDMEVAHALLMPFRAMACVARKTRTLT
KVACAGVCV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf