Gcaud9451.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9451.t1
Unique NameGcaud9451.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length268
Homology
BLAST of Gcaud9451.t1 vs. uniprot
Match: A0A2V3IHU8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHU8_9FLOR)

HSP 1 Score: 375 bits (963), Expect = 5.230e-129
Identity = 179/264 (67.80%), Postives = 216/264 (81.82%), Query Frame = 0
Query:    7 LTRLFFTL---YLYVRIALHRVLLFISQTIEYRTTPVKKEFHRTILLLGDGTAEGIGDSFGHTGLCSRLNALIRKERDQSGLRMVWSVLTCGRIFSRARDWKPASQEGSTLFHRVIKKRMFIDAHVVVLLFGMHDDINDEQLPSDIADIARAIALLGKHVVVSTLPNFYYHKDERYAAVSRANQNLKRLIKQVAEEVKPSQISVTCDVDSSKTTTMGAHTSTQHNGFFTLNGNGYRLFSRDVYEQLVFAAKRVEWSYWKGKIPM 267
            L R+F TL   YLY R+ALHRVLLFISQT+EY T PV  ++HRTILLLGDGTAEGIGD+FGHTGLCSR+N LIRKER+ S LRM+WSV+TCG++FS A DW+P +Q G TLFHR I+++ F +AHVVVL FGMHDD+ D++ P D+ADIARA+ALLGKHV+V+ LPN Y HKDERYA V+ AN  +K L++QVAEE+KPS ISV+  +++ KTT MGAHT  Q     T NGNGYRL +RDVYEQLV AAKRVEWS+WKGKIP+
Sbjct:    4 LDRIFDTLGVIYLYFRLALHRVLLFISQTVEYSTMPVSSQYHRTILLLGDGTAEGIGDAFGHTGLCSRINHLIRKERETSNLRMLWSVITCGKMFSTAADWRPTAQNGPTLFHRFIRRKPFSNAHVVVLFFGMHDDLTDQRFPQDVADIARALALLGKHVIVADLPNVYSHKDERYAVVTSANSRMKHLVQQVAEEIKPSAISVSLGIETMKTTAMGAHTLRQEKSCATFNGNGYRLLARDVYEQLVLAAKRVEWSHWKGKIPL 267          
BLAST of Gcaud9451.t1 vs. uniprot
Match: A0A7S0BSS8_9RHOD (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BSS8_9RHOD)

HSP 1 Score: 94.7 bits (234), Expect = 3.020e-20
Identity = 58/163 (35.58%), Postives = 85/163 (52.15%), Query Frame = 0
Query:   46 RTILLLGDGTAEGIGDSFGHTGLCSRLNALIRKERDQSGLRMVWSVLTCGRIFSRARDWKPASQEG--------STLFHRVIKKRMFIDAHVVVLLFGMHDDINDEQLPSDIADIARAIALLG-------KHVVVSTLPNFYYHKDERYAAVSRANQNLKRLI 193
            RTILL+GDG AEGIGD   + GL +RL A++ KE+D +GLR+ W V + G   + + DW P +            +LF       MF DAHVVV+L G  D++   Q P+D+      + LL        K V++S +P F   ++ +     R N+ L+  I
Sbjct:   18 RTILLIGDGIAEGIGDGLANGGLAARLRAMMAKEKDANGLRLTWRVASAGAFRAISDDWIPGADHPPNRVTGVRKSLFVDTFVDGMFKDAHVVVILLGGQDELFSSQ-PTDVERTVSNLKLLALELEKLDKEVLISQIPAFSDDEEVKLRVYQR-NRMLREFI 178          
BLAST of Gcaud9451.t1 vs. uniprot
Match: A0A5J4YXT0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXT0_PORPP)

HSP 1 Score: 70.9 bits (172), Expect = 1.270e-10
Identity = 67/240 (27.92%), Postives = 105/240 (43.75%), Query Frame = 0
Query:   46 RTILLLGDGTAEGIGDSFGHTGLCSRLNALIR--KERDQSGLRMVWSVLTCGRIFSRARDW-----KPASQEGSTLFHRVIKKRMFI----------DAHVVVLLFGMHDD---INDEQLPSDIADIARAIALLGKHVVVSTLPNFYYHKDERYAA--VSRANQNLKRLIKQVAEEVKPSQISVTCDVDSSKTTTMGAHTSTQHNGFFTLNGNGYRLFSRDVYEQLVFAAKRVEWSYWKG 263
            +T+LL+GDG A GIGDS  H GL  R+  L+   + R+   L + W +++  R FS +  W     KPA  + +    +  K   F           DA VVV+L G  D+   I  ++   +I   A+ +  L K VVV T      H  +  A   V+  N+ L   IKQV    KP ++ +   VD  +    G   +    G+     + +R     + + +    K+VE+  WK 
Sbjct:   49 KTLLLVGDGVALGIGDSLVHGGLAGRMRRLMMHGRAREDYKLLLNWKIVSDAREFSTSEQWVPGSDKPADSQKTAASPKENKGNYFDEVFGAEGKYRDADVVVILVGSEDEKAGIAPKRSAENIMLTAKELTKLRKKVVVCTCA---LHSVDPIAEQHVAARNRELLERIKQV----KPLKLGIFEGVDLMQIVNQGEMLN-DIGGYIVFTDSAFRQLGSMLLDVVKDPMKQVEFQLWKN 280          
The following BLAST results are available for this feature:
BLAST of Gcaud9451.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IHU8_9FLOR5.230e-12967.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0BSS8_9RHOD3.020e-2035.58Hypothetical protein (Fragment) n=2 Tax=Rhodosorus... [more]
A0A5J4YXT0_PORPP1.270e-1027.92Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 179..199
NoneNo IPR availableSUPERFAMILY52266SGNH hydrolasecoord: 46..205
IPR036514SGNH hydrolase superfamilyGENE3D3.40.50.1110SGNH hydrolasecoord: 46..251
e-value: 4.7E-7
score: 31.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_258_length_33686_cov_5.184015contigNODE_258_length_33686_cov_5.184015:12656..13459 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9451.t1Gcaud9451.t1Gracilaria caudata M_176_S67 malemRNANODE_258_length_33686_cov_5.184015 12656..13459 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9451.t1 ID=Gcaud9451.t1|Name=Gcaud9451.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=268bp
MGFVDHLTRLFFTLYLYVRIALHRVLLFISQTIEYRTTPVKKEFHRTILL
LGDGTAEGIGDSFGHTGLCSRLNALIRKERDQSGLRMVWSVLTCGRIFSR
ARDWKPASQEGSTLFHRVIKKRMFIDAHVVVLLFGMHDDINDEQLPSDIA
DIARAIALLGKHVVVSTLPNFYYHKDERYAAVSRANQNLKRLIKQVAEEV
KPSQISVTCDVDSSKTTTMGAHTSTQHNGFFTLNGNGYRLFSRDVYEQLV
FAAKRVEWSYWKGKIPM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036514SGNH_hydro_sf