Gcaud945.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud945.t2
Unique NameGcaud945.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length629
Homology
BLAST of Gcaud945.t2 vs. uniprot
Match: E0UKK2_GLOV7 (Hom_end-associated Hint domain protein n=2 Tax=Gloeothece TaxID=28070 RepID=E0UKK2_GLOV7)

HSP 1 Score: 287 bits (735), Expect = 3.630e-83
Identity = 205/633 (32.39%), Postives = 331/633 (52.29%), Query Frame = 0
Query:    2 YIPTFQFEYGPTASAIKDIP-DGERQDTASQLDSYIKEGQFTANINIALAGDTDSANEATWFLYNLWTTLAVLNFPDVNNAISEYEKAGLNIPTEVSANHWDQGEYNVWFTPSTGSFLY---SNTFKTSMQESALTVSSGGASRERTEYLS-NGYSLSFCDYGSLALYKPQSS-CFGAGTNVLMGDNSVKDISSVKKGDMVATTRGPREVIMVESPLLEQRTLWNINELNMSCTEGHCFRAYDEEKVKRLAVDELVTMDSAPTMSMNGSSVGKCKIGSQILAKLYDGEDVVAYVNTLSRTQKQSDENVRVYDIILDKWWKDNPSYFVGGADSFLAVDAETSNPTSDPPTSAAILSAMDLALSACDNPFVSPFLLMSLACATLDLITIERRANEMAWQVLEEEPPKSLRIPETDIFEKEDGQWSELASYMEYFLISMYGRWIRSIVRVTAEPAVEDALPD--DMIAIGIHDIELSGDHGMPPNSSLSVAATLSNGQQKQSQKLDVA----HTGDEWCYFFE--VHRRSMFSEADSHSHSHLSGVHLWNGVEFANFERSITLDKVHGRFLHTFLYAPNHMAYKVIGRVGISVRRV--RESYGEWKAEDDGM---MLAKGVAVGRQLGYQLGAALE 615
            ++  F+  Y PT+ A + I   GE +  +  L S I +GQFTANIN  ++   DS N ATWFL+NLW  L  L + +V+ AI++Y+  GL +P EV +  W  G Y  W++P +G+ L    S T   +M E  LTV SG      T   + NGYS SF ++GSL  Y P SS CFG GT VLM D S K I S++ GD V +  GPR+V+++E PL   RTL++IN LN+  +  H FR  D+    R A+D    +D  PTM+  G  VGK +   Q+L  + + +     V  ++ +   +DEN  VYD++L+ W K   +Y+VGG +++ AVDAET++P  D   + AI++AM++   AC      P L +    + +++  + +   +        +  + L IP+ D + + + +W    S +EY+L+  YGRWIRS   +      ++ALP   + +AIG+ D+EL GD  M  NS + +   ++  Q   S    +      T   W   F+  V+   + + + S     L G    N   F++F  +I  +         F++  +     +IGR+ +  R++  ++ + +  A +      ++   +++GRQLGY++ A +E
Sbjct:  190 FLAVFETGYPPTSIAFRAIEATGEMKQASLVLYSAIADGQFTANINQGISTGGDSTNAATWFLFNLWIALKALGYDNVDAAITQYKNHGLKVPIEVDSRSWWTGGYISWYSPLSGADLIAEASATITAAMPEEELTVFSGSPYPATTNVNTPNGYSYSFSNWGSLNRYLPHSSSCFGKGTLVLMADGSAKPIESIQIGDKVLSNLGPRQVVLIEKPLRANRTLYSINNLNLFASSAHPFRGADQCGPMRYAIDPWALIDGIPTMTAKG--VGKLEKNIQLLG-IRNNQPTAIEVEQIN-SHPTTDENEIVYDLLLENWEKGYATYYVGGLETYFAVDAETADPLHDLGVTMAIVTAMEMLRPACWEHISEPHLEIPRILSAVNISDLPQLIRKAFRPFFGGKKKQRLSIPKQDFYMR-NSEWDAHTSLLEYYLVREYGRWIRS--ELATGWRTDNALPSMTNHLAIGLFDLELIGDPIMA-NSEVLIELEVNGVQFMGSNMPHIITLPLQTKPVWNIRFDRIVNMGRVLTTSPSPM---LIGRIKLNQKTFSHFRSAIPKNLQSTTRADHFIFNQDG---NIIGRICLDYRQLSAKDLHNQTVAAEQWTQKHIMLMAISLGRQLGYKILAQIE 808          
BLAST of Gcaud945.t2 vs. uniprot
Match: A0A5B2VI40_9BACT (Vint domain-containing protein n=1 Tax=Chitinophaga agrisoli TaxID=2607653 RepID=A0A5B2VI40_9BACT)

HSP 1 Score: 266 bits (679), Expect = 4.500e-75
Identity = 176/533 (33.02%), Postives = 262/533 (49.16%), Query Frame = 0
Query:    2 YIPTFQFEYGPTASAIKDIP-DGERQDTASQLDSYIKEGQFTANINIALAGDTDSANEATWFLYNLWTTLAVLNFPDVNNAISEYEKAGLNIPTEVSANHWDQGEYNVWFTPSTGSFLYSNTFKTSMQESALTV----SSGGASRERTEYLSNGYSLSFCDYGSLALYKPQ-SSCFGAGTNVLMGDNSVKDISSVKKGDMVATTRGPREVIMVESPLLEQRTLWNINELNMSCTEGHCFRAYDEEKVKRLAVDELVTMDSAPTMS-------MNGSSVGKCKIGS--QILAKLYDGEDVVAYVNTLSR----TQKQSDENV--RVYDIILDKWWKDNPSYFVGGADSFLAVDAETSNPTSDPPTSAAILSAMDLALSACDNPFVSPFLLMSLACATLDLITIERRANEMAWQVLEEEPPKSLR---IPETDIFEKEDGQWSELASYMEYFLISMYGRWIRSIVRVTAEPAVEDALPDDMIAIGIHDIELSGDHGMPPNSSLSVAATLSNG---QQKQSQKLDVAHTGDEWCYF 507
            Y+  F+  + PTA A+K I   G     A+ LD+ I  G+FTANIN+A++   DS+  A WFLYNLW TL  L  PD++ AI+ Y  AGL++P EVSA HW  G Y+ WF P +G+ +          +  +      + G    +     +NGYSLSF  +G+L  Y PQ +SCFGA T V+M D + + IS+++ G +V T  GPR+V++VESP    RTL+ +N   +  T  H FR       KR AVD     DS PTMS         G ++   + G+   IL          +  + L      T   +D +    VYD++L+ W +D+P Y+VGG   F AVDAET++P  D PT+AAI++A+   L         P          L  I  + +   +   +L+ EP + L+   IP  D +   DG+W   AS +EY L+    R+IR    +            D   + +HD+  +GD  +P  + L ++ ++      +    Q +  A     W YF
Sbjct:  170 YLAAFEQGFAPTAQALKTISISGLLSQAATTLDAAISNGEFTANINLAISMGGDSSAAAAWFLYNLWVTLWALGLPDLDGAINRYAAAGLDVPIEVSAGHWRNGGYSSWFAPLSGADMVGAALGAIHADMPVLAHYNDAIGPQLPDNMTTFANGYSLSFTTWGTLNSYLPQPASCFGADTAVMMADGNTQPISAIQPGHLVYTNTGPRKVVLVESPQRAGRTLYQLNGQQVFATAAHPFRTAAPHSAKRAAVDAWTLTDSIPTMSGAGVLTLATGLTLSGLEAGAPANILLTQLTPHIAGSIADNLQHYTEDTTSLADNHAAQEVYDLVLEGWERDHPVYYVGGPQYFFAVDAETADPLVDIPTTAAIVTALQSVLPLSRQHLTDP-------ATQLPGIFAQLQHAPLCDALLDPEPLEPLQRPVIPGPDFY-MHDGKWDAHASLLEYHLVRRLSRFIRRETAMAWRARHSAPAAGDHFVVALHDLIFAGDAPLPAAADLEISFSVDGWPAMKDNNRQLIIPARDQPRWQYF 694          
BLAST of Gcaud945.t2 vs. uniprot
Match: E6WND9_PANSA (Hom_end-associated Hint domain protein n=1 Tax=Pantoea sp. (strain At-9b) TaxID=592316 RepID=E6WND9_PANSA)

HSP 1 Score: 258 bits (658), Expect = 2.920e-72
Identity = 175/521 (33.59%), Postives = 267/521 (51.25%), Query Frame = 0
Query:    2 YIPTFQFEYGPTASAIKDIPD-GERQDTASQLDSYIKEGQFTANINIALAGDTDSANEATWFLYNLWTTLAVLNFPDVNNAISEYEKAGLNIPTEVSANHWDQGEYNVWFTPSTGSFLYSNT---FKTSMQESALTVS-----SGGASRERTEYLSNGYSLSFCDYGSLALYKP-QSSCFGAGTNVLMGDNSVKDISSVKKGDMVATTRGPREVIMVESPLLEQRTLWNINELNMSCTEGHCFRAYDEEKVKRLAVDELVTMDSAPTMSMNGSSVGKCKIGSQILAKLYDGEDVVAYVNTLSRTQKQSDENVRVYDIILDKWWKDNPSYFVGGADSFLAVDAETSNPTSDPPTSAAILSAMDLALSACDNPFVSPFLLMSLACATLDLITIERRANEMAWQVLEEEPPKSL---RIPETDIFEKEDGQWSELASYMEYFLISMYGRWIRSIVRVTAEPAVEDA--LPDDMIAIGIHDIELSGDHGMPPNSSLSVAATLSNGQQKQSQKLDVAHTGDEWCYF 507
            Y+  F   Y PT++A++ I + G+   +A  L   I  GQFTANIN A++   DS N A WFL+NLW TL  L   DV+  I + +  GL +P  V    W  G Y  W+T  +GS + +        +M E    +          S    + ++NGY LS C +G+L  + P  SSCFG GT VLM D S K I ++  GD V +++G R+++++ESPL  +R+L+ +N+L +  T  H FR  + +   R ++D   T+DS P+M   G  V     GS +LA L +G+ V   V ++ +      E  RVYD++L+ W +   ++FVGG   + AVDAET++P  D   + AI+SAM+ A+ AC   F      M+ A A+L++  +      + +    +E    L   R+P+TD F  ++G W   AS +E  LI  + R IR  +     PAV +   +  D     + DIEL+GD+ +PP ++ S   T  + Q           T D   YF
Sbjct:  172 YLGVFTQGYAPTSAALRPIMNNGQGPQSAQLLAQAIARGQFTANINQAISAGGDSTNAAVWFLFNLWVTLKALGAADVDAVIQQSQTQGLIVPAPVGPGSWWNGGYTQWYTALSGSDVQAKIAPRISDAMPEKETIIQRVPPDGFPISNTFNKTVNNGYPLSLCQWGNLNWFPPPSSSCFGKGTQVLMADGSGKAIETLNVGDEVMSSQGARKIVLIESPLRRERSLYQLNKLPVFATAAHPFRTQEADNCLRTSIDPWSTIDSVPSMIAGG--VSALSRGS-VLAGLSNGQHVPVSVTSIDQYPATEPEE-RVYDLLLENWTQGYVTWFVGGPSVYCAVDAETADPAYDRLCTLAIVSAMNGAIDACRTNFSGQDQQMAQAIASLNIDAV------IPFNACYQESDDKLALPRVPDTDFF-LQNGLWDSCASQLEAQLIRHHARGIRRWLN----PAVSNGTTVASDQWYFALRDIELTGDYPIPPGTAPSFTLTSYSAQVGGKSICTTLDTADVSRYF 677          
BLAST of Gcaud945.t2 vs. uniprot
Match: A0A7C9LK87_9DEIO (Hom_end_hint domain-containing protein n=2 Tax=unclassified Deinococcus TaxID=2623546 RepID=A0A7C9LK87_9DEIO)

HSP 1 Score: 223 bits (567), Expect = 1.670e-59
Identity = 166/504 (32.94%), Postives = 256/504 (50.79%), Query Frame = 0
Query:    2 YIPTFQFEYGPTASAIKDIPD-GERQDTASQLDSYIKEGQFTANINIALAGDTDSANEATWFLYNLWTTLAVLNFPDVNNAISEYEKAGLNIPTEVSANHWDQGEYNVWFTPSTGSFLYSN---TFKTSMQESALTVSSGGASRERTEYLSN---GYSLSFCDYGSLALYKPQ-SSCFGAGTNVLMGDNSVKDISSVKKGDMVATTRGPREVIMVESPLLEQRTLWNINELNMSCTEGHCFRAYDEEK---VKRLAVDELVTMDSAPTMSMNGSSVGKCKIGSQILAKLYDGEDVVAYVNTLSRTQKQSDENVRVYDIILDKWWKDNPSYFVGGADSFLAVDAETSNPTSDPPTSAAILSAMDLALSACDNPFVSPFLLMSLACATLDLITIERRANEMAWQVLEEEPPKSLRIPETDIFEKEDGQWSELASYMEYFLISMYGRWIRSIVRVTAEPAVEDALPDDMIA-IGIHDIELSGDHGMPP--NSSLSVAATLSNGQQKQ 491
            Y+  F   + PTA+ +  +   G+     S L     +GQFT+NIN A+A   DS N A WFL+NLW +L  L  P+V++ I      GL +P +V    W  G Y  WF   +GS + +    T    + E+ +T  +         + ++   GY+ S C++G+L  Y P  SSCFG GT VLM D + + I ++  GD V +++GPR V++VESPL + R L+ +N L +  T  H FR             AVD    MDS P    +G  V   + GS+ L     GE  V  V  L+  Q    E  RVYD++L++W +D P+Y+VGG D+FLA ++ET++P+ D   + A+ SA+   + +  +  V+    ++ A + L L   E  +  +A       P     +P+ + + +E G+W E AS +E  LI  + R IR   R  + PA+  +   D  A + + D+EL GD G+PP  NS+L      +  Q +Q
Sbjct:  173 YLGVFSTGFSPTAAVVSAVLGAGQGSAAVSLLSDAAVKGQFTSNINQAVAMGGDSTNAAVWFLFNLWISLKALGAPNVDDIIQRSAAGGLTVPAQVGPGVWWSGGYTSWFAALSGSDVSAQAAGTIAADLPETEMTAVASDPPVVPIPFSTSEPHGYATSLCNWGALNWYNPPPSSCFGRGTLVLMADGAAQAIETLAIGDEVLSSQGPRRVVLVESPLRQGRALYQLNGLEVFVTSAHPFRCAISGAGLAPALAAVDPWALMDSLPDRIRDG--VTALRPGSR-LQGWQQGETEVE-VTQLTALQGDDAEE-RVYDLLLERWTEDKPAYYVGGPDTFLAAESETADPSFDLACTVAVASALQGMIGS-THAEVATVRQVAEALSQLRLPPSEDASAVLAV------PATLPAVPDVNFYLRE-GRWDEQASMLEAQLIRQHARTIR---RRLSRPALTGSGRSDTSAGLIVRDLELLGDSGLPPQVNSTLEFRLRGAGLQSRQ 660          
BLAST of Gcaud945.t2 vs. uniprot
Match: A0A845X9U5_9CYAN (Hint domain-containing protein n=1 Tax=Spirulina sp. SIO3F2 TaxID=2607816 RepID=A0A845X9U5_9CYAN)

HSP 1 Score: 194 bits (492), Expect = 1.780e-51
Identity = 150/469 (31.98%), Postives = 234/469 (49.89%), Query Frame = 0
Query:  164 YKPQ-SSCFGAGTNVLMGDNSVKDISSVKKGDMVATTRGPREVIMVESPLLEQRTLWNINELNMSCTEGHCFRAYDEEKVKRLAVDELVTMDSAPTMSMNGSSVGKCKIGSQILAKLYDGEDVVAYVNTLSR---TQKQSDENVRVYDIILDKWWKDNPSYFVGGADSFLAVDAETSNPTSDPPTSAAILSAMDLALSACDNPFVSPFLLMSLACATLDLITIERRANEMAWQVLEEEPPKSLRIPETDIFEKEDGQWSELASYMEYFLISMYGRWIRSIVRVTAEPAVEDALPDDMIAIGIHDIELSGDHGMPPNSSLSVAATLSNGQQKQSQKLDV----AHTGDEWCYFFE--VHRRSMFSEADSHSHSHLSGVHLWNGVEFANFERSITLDKVHGRFLHTFLYAPNHMAYKVIGRVGISVRRVRESYGEWKAEDDGM-------MLAKGVAVGRQLGYQLGAALE 615
            YKPQ SSCFG GT VLM D   K I S++ GD V +  GPR+V+++E P    RTL+++N+  +  T GH FRA   + V R A+D  + +D  PTM++ G  VGK +  +Q+L  L +GE     +N +     T K SDE   VYD++L+ W K + +Y+VGG D F AVDAET++P  +   + AI++AM++  SAC      P   +    A +D+  +   A + +   +  E      IP  D + + DG W    S++EY+L+  +GRWIRS +       +      D + +G+ D+EL G+  M  N+ +S+       Q   S         A     W   F+  V      + A S     L+G    N     +F  +I +D         F++ P+     VIGR+ + +R + +S  + + E D         +++  +A+GRQLGY+L A  E
Sbjct:    3 YKPQPSSCFGQGTLVLMADGQTKPIESIQLGDEVQSNLGPRKVVLIEQPKRANRTLYSLNQSTVFATSGHPFRAAGADNVMRYALDPWLLIDGIPTMTVTG--VGKLEEKTQLLG-LNNGEPTSIEINQIEPHPPTDKDSDE--LVYDLLLENWEKGHAAYYVGGPDIFFAVDAETADPLHETEVTVAIVAAMEMVKSACWEHVKDPQQDIPHFLAAIDISDLPDLARKASRSFVGREKKWRPSIPTQDFYLR-DGDWDAHTSFLEYYLVRDFGRWIRSELLTGWRSDIVGRSLGDHLVVGLFDLELIGEP-MIANTDISIELEAKGIQLIWSDVPKCVTLPASAKPIWTIRFDRSVDMGRALATAPSPM---LAGKIRQNQQVLGHFRAAIAVDGQPTPRTDYFIFNPDGF---VIGRICLDLRWLSKS--DLRLEADAAQHWTRRHIMSLAIALGRQLGYKLLAQFE 456          
BLAST of Gcaud945.t2 vs. uniprot
Match: A0A845XF04_9CYAN (Hint domain-containing protein (Fragment) n=1 Tax=Spirulina sp. SIO3F2 TaxID=2607816 RepID=A0A845XF04_9CYAN)

HSP 1 Score: 163 bits (412), Expect = 6.190e-41
Identity = 90/210 (42.86%), Postives = 121/210 (57.62%), Query Frame = 0
Query:    2 YIPTFQFEYGPTASAIKDIPDGERQDTASQLDSYIKEGQFTANINIALAGDTDSANEATWFLYNLWTTLAVLNFPDVNNAISEYEKAGLNIPTEVSANHWDQGEYNVWFTPSTGSFLY-----SNTFKTSMQESALTVSSGGASRERTEYLSN---GYSLSFCDYGSLALYKPQ-SSCFGAGTNVLMGDNSVKDISSVKKGDMVATTRGP 202
            Y+  F+  Y PT +A+K I   E +  ++ L+  I  GQFTANIN A++   DS N ATWFL+NLW  L  L + DV+ AI+ Y+K GLN+P EV A  W  G Y  W++P +G+ +      S    +SM E    +    +  +   Y+ N   GYS SFC +GSL+ YKPQ SSCFG GT VLM D   K I S++ GD V +  GP
Sbjct:  180 YLAVFEAGYEPTTTALKAISASEMEPASALLNQAISNGQFTANINQAISMGGDSTNAATWFLFNLWIALKALGYSDVDTAIANYKKKGLNVPIEVDAGSWWTGGYTSWYSPLSGNDVMRLKATSEAISSSMPELVTEIVWPLSFPQPKPYIGNWPNGYSNSFCQWGSLSRYKPQPSSCFGQGTLVLMADGQTKPIESIQLGDEVQSNLGP 389          
The following BLAST results are available for this feature:
BLAST of Gcaud945.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
E0UKK2_GLOV73.630e-8332.39Hom_end-associated Hint domain protein n=2 Tax=Glo... [more]
A0A5B2VI40_9BACT4.500e-7533.02Vint domain-containing protein n=1 Tax=Chitinophag... [more]
E6WND9_PANSA2.920e-7233.59Hom_end-associated Hint domain protein n=1 Tax=Pan... [more]
A0A7C9LK87_9DEIO1.670e-5932.94Hom_end_hint domain-containing protein n=2 Tax=unc... [more]
A0A845X9U5_9CYAN1.780e-5131.98Hint domain-containing protein n=1 Tax=Spirulina s... [more]
A0A845XF04_9CYAN6.190e-4142.86Hint domain-containing protein (Fragment) n=1 Tax=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 162..244
e-value: 2.7E-9
score: 39.3
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 169..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_962_length_15678_cov_4.652467contigNODE_962_length_15678_cov_4.652467:8414..10300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud945.t2Gcaud945.t2Gracilaria caudata M_176_S67 malemRNANODE_962_length_15678_cov_4.652467 8414..10300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud945.t2 ID=Gcaud945.t2|Name=Gcaud945.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=629bp
LYIPTFQFEYGPTASAIKDIPDGERQDTASQLDSYIKEGQFTANINIALA
GDTDSANEATWFLYNLWTTLAVLNFPDVNNAISEYEKAGLNIPTEVSANH
WDQGEYNVWFTPSTGSFLYSNTFKTSMQESALTVSSGGASRERTEYLSNG
YSLSFCDYGSLALYKPQSSCFGAGTNVLMGDNSVKDISSVKKGDMVATTR
GPREVIMVESPLLEQRTLWNINELNMSCTEGHCFRAYDEEKVKRLAVDEL
VTMDSAPTMSMNGSSVGKCKIGSQILAKLYDGEDVVAYVNTLSRTQKQSD
ENVRVYDIILDKWWKDNPSYFVGGADSFLAVDAETSNPTSDPPTSAAILS
AMDLALSACDNPFVSPFLLMSLACATLDLITIERRANEMAWQVLEEEPPK
SLRIPETDIFEKEDGQWSELASYMEYFLISMYGRWIRSIVRVTAEPAVED
ALPDDMIAIGIHDIELSGDHGMPPNSSLSVAATLSNGQQKQSQKLDVAHT
GDEWCYFFEVHRRSMFSEADSHSHSHLSGVHLWNGVEFANFERSITLDKV
HGRFLHTFLYAPNHMAYKVIGRVGISVRRVRESYGEWKAEDDGMMLAKGV
AVGRQLGYQLGAALEQSGGKISFNNWVK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036844Hint_dom_sf