Gcaud9446.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9446.t1
Unique NameGcaud9446.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length280
Homology
BLAST of Gcaud9446.t1 vs. uniprot
Match: A0A2V3IHU2_9FLOR (Proliferating cell nuclear antigen n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHU2_9FLOR)

HSP 1 Score: 491 bits (1264), Expect = 2.100e-174
Identity = 247/264 (93.56%), Postives = 255/264 (96.59%), Query Frame = 0
Query:    1 MFEAKLTDSTTIKRVLDAIKDLIDQANFDCSADGLSLQAMDTPHVCLTTMTLRSQAFEVYRCDRPLSMGINLSSFSKILKCAGPKDSVKIVANDEGADCAEFIFENESADRIAHFELKLMDIDSEHLSIPEDSDYEAIISMPSQEYRRIFSDLSIIGDTITIEITKNTACFSVEGDIGNGSLNLAQSDSADDKNAVTINVKEPVKMTFPGKYLNTFTKAVPISDFVTLCLTDGNPLAIEFSLPDEAGFVRYFLAPKIDQDMAAE 264
            MFEAKLT+STTIKRVLDAIKDLI QANFDCSADGLSLQAMDTPHVCLTTMTLRSQAFEVYRCDRPLSMGINLSS SKILKCA  KDSVKIVA+DEGADCAEFIFENESADRIAHFELKLMDIDSEHLSIPEDSDY+AIISMPS EYRRIFSDLSIIGDTITIEI KNTACFSVEGDIGNGSLNLAQ+DSAD+KN VTINVKEPVKMTFPGKYLNTFTKAVPIS+FVTLCLTDGNPLAIEFSLPDEAGFVRYFLAPKIDQ++  E
Sbjct:    1 MFEAKLTESTTIKRVLDAIKDLIQQANFDCSADGLSLQAMDTPHVCLTTMTLRSQAFEVYRCDRPLSMGINLSSISKILKCAASKDSVKIVADDEGADCAEFIFENESADRIAHFELKLMDIDSEHLSIPEDSDYQAIISMPSAEYRRIFSDLSIIGDTITIEINKNTACFSVEGDIGNGSLNLAQTDSADEKNPVTINVKEPVKMTFPGKYLNTFTKAVPISEFVTLCLTDGNPLAIEFSLPDEAGFVRYFLAPKIDQELGEE 264          
BLAST of Gcaud9446.t1 vs. uniprot
Match: R7QC97_CHOCR (Proliferating cell nuclear antigen (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC97_CHOCR)

HSP 1 Score: 437 bits (1125), Expect = 1.300e-152
Identity = 210/260 (80.77%), Postives = 242/260 (93.08%), Query Frame = 0
Query:    1 MFEAKLTDSTTIKRVLDAIKDLIDQANFDCSADGLSLQAMDTPHVCLTTMTLRSQAFEVYRCDRPLSMGINLSSFSKILKCAGPKDSVKIVANDEGADCAEFIFENESADRIAHFELKLMDIDSEHLSIPEDSDYEAIISMPSQEYRRIFSDLSIIGDTITIEITKNTACFSVEGDIGNGSLNLAQSDSADDKNAVTINVKEPVKMTFPGKYLNTFTKAVPISDFVTLCLTDGNPLAIEFSLPDEAGFVRYFLAPKIDQD 260
            MFEA+L  S T+K++LD++KDLI Q NFDCS DG+SLQAMD  HVCL TMTLRSQAF++YRCD+PLSMGINL+SFSKILKCAG  DSVKIVA+DEGADCAEFIFEN+SADR+AHFELKLMDIDSEH+S+P+D DY+AII++PSQEYRRIFSDLSIIGDTI+IE++K +ACFSVEGDIG GSLN+ QSDSADDK+A+TINVKEPVKMTFPG+YLN FTKAVPISD VTLC+ DG+PLAIEF+LP+EAGFVRYFLAPKIDQD
Sbjct:   43 MFEARLPQSATLKKLLDSVKDLIAQTNFDCSNDGISLQAMDEAHVCLATMTLRSQAFDLYRCDKPLSMGINLTSFSKILKCAGNDDSVKIVADDEGADCAEFIFENKSADRVAHFELKLMDIDSEHMSVPDDGDYQAIINLPSQEYRRIFSDLSIIGDTISIEVSKTSACFSVEGDIGQGSLNIQQSDSADDKSAITINVKEPVKMTFPGRYLNMFTKAVPISDSVTLCIQDGHPLAIEFALPEEAGFVRYFLAPKIDQD 302          
BLAST of Gcaud9446.t1 vs. uniprot
Match: A0A1X6PGT2_PORUM (Proliferating cell nuclear antigen n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PGT2_PORUM)

HSP 1 Score: 293 bits (751), Expect = 1.230e-96
Identity = 142/261 (54.41%), Postives = 197/261 (75.48%), Query Frame = 0
Query:    1 MFEAKLTDSTTIKRVLDAIKDLIDQANFDCSADGLSLQAMDTPHVCLTTMTLRSQAFEVYRCDRPLSMGINLSSFSKILKCAGPKDSVKIVANDEGADCAEFIFENESADRIAHFELKLMDIDSEHLSIPEDSDYEAIISMPSQEYRRIFSDLSIIGDTITIEITKNTACFSVEGDIGNGSLNLAQSDSADDKNA--VTINVKEPVKMTFPGKYLNTFTKAVPISDFVTLCLTDGNPLAIEFSLPDEAGFVRYFLAPKIDQ 259
            MFEA++  ++T+K+VL+A+KD++ + NFDCS +G+ LQAMD  HV L  + LR+Q FE++RCDR L++GI L++ SK+L CAG  D+V + A DEGAD AEF+FE+   DRI  FEL LMDIDSEHL +PED+ Y A+I MPS E+RRI SDLS IGDT+TIE++K+ A F V GDIG G+L + QS++A DK +  V I ++EP K T+  +YL+ FTKA P+SD VT+ L+   PL +EF++ +E G+V+Y+LAPKI +
Sbjct:    1 MFEARMAQASTLKKVLEAVKDMVSEGNFDCSEEGICLQAMDVAHVSLVNVLLRAQGFEMFRCDRNLALGIQLANLSKVLNCAGKDDAVTVKAEDEGADTAEFMFESSKGDRITTFELTLMDIDSEHLGVPEDTTYTAVIKMPSTEFRRIISDLSTIGDTVTIEVSKDGASFQVSGDIGKGNLCI-QSNTAADKPSERVEITMEEPTKQTYAMRYLSFFTKAAPLSDTVTISLSPDVPLVVEFNIGEEVGYVKYYLAPKITE 260          
BLAST of Gcaud9446.t1 vs. uniprot
Match: A0A7S1XH84_9RHOD (Proliferating cell nuclear antigen n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XH84_9RHOD)

HSP 1 Score: 290 bits (742), Expect = 3.990e-95
Identity = 146/264 (55.30%), Postives = 198/264 (75.00%), Query Frame = 0
Query:    1 MFEAKLTDSTTIKRVLDAIKDLIDQANFDCSADGLSLQAMDTPHVCLTTMTLRSQAFEVYRCDRPLSMGINLSSFSKILKCAGPKDSVKIVANDEGADCAEFIFENESADRIAHFELKLMDIDSEHLSIPEDSDYEAIISMPSQEYRRIFSDLSIIGDTITIEITKNTACFSVEGDIGNGSLNLAQSDSADD-KNAVTINVKEPVKMTFPGKYLNTFTKAVPISDFVTLCLTDGNPLAIEFSLPDEAGFVRYFLAPKIDQDMAA 263
            MFEA+L+    +K+V+D I+DLI + NFDCS +G++LQAM+T HV L ++ +R+ AFE YRCDRP+S+GI +  FS ILKCAG  DSV I A DEGAD AEFIFENES DRI+ FELKLMDID+EHL IP D  Y A I MPS E+RRI +DL +IGD   IE++K+ A F V+GDIG G++ L  S SAD  + +V I + EPVKM++  +YL+ F+KA P+SD VT+ +++  P+AI++SL  + GF+++FLAPK+++D  A
Sbjct:    1 MFEARLSKCLLLKKVVDGIRDLIVEGNFDCSEEGVALQAMETSHVALVSLLIRADAFESYRCDRPVSLGIGIKPFSTILKCAGTDDSVTIKAQDEGADTAEFIFENESQDRISDFELKLMDIDAEHLGIP-DEPYAATIKMPSSEFRRIVTDLGVIGDLCQIEVSKSGASFQVKGDIGKGNICLHSSVSADKPEESVVIEMTEPVKMSYALRYLSMFSKASPLSDTVTIQISNDVPIAIQYSLERDQGFLKFFLAPKVEEDATA 263          
BLAST of Gcaud9446.t1 vs. uniprot
Match: M2WY47_GALSU (Proliferating cell nuclear antigen n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WY47_GALSU)

HSP 1 Score: 283 bits (723), Expect = 2.660e-92
Identity = 144/258 (55.81%), Postives = 192/258 (74.42%), Query Frame = 0
Query:    2 FEAKLTDSTTIKRVLDAIKDLIDQANFDCSADGLSLQAMDTPHVCLTTMTLRSQAFEVYRCDRPLSMGINLSSFSKILKCAGPKDSVKIVANDEGADCAEFIFENESADRIAHFELKLMDIDSEHLSIPEDSDYEAIISMPSQEYRRIFSDLSIIGDTITIEITKNTACFSVEGDIGNGSLNLAQSDSADDKNAVT-INVKEPVKMTFPGKYLNTFTKAVPISDFVTLCLTDGNPLAIEFSLPDEAGFVRYFLAPKID 258
            FEA+LT ++ IK++L+AIKDL+  ANFDCS +GLSLQAMD+ HV L +M L +Q FE++RC R +S+GINL+S +KILKCAG  DS+ + A+++G D AEF+FE++S DR++ FELKLMDIDSEHL IP D+ Y AI+ MPS EYRRI SDL ++GDT+ I ++K +  F V+GDIG GS+ L  S   D    V  I+++EPV M F  +YLN F KA P+SD VTL L+   PL IEF   ++ G++RY+LAPKID
Sbjct:   15 FEARLTQASLIKKILEAIKDLVTDANFDCSPEGLSLQAMDSSHVSLVSMVLHAQGFEMFRCQRAVSLGINLASLTKILKCAGNDDSITLRADEKG-DKAEFVFESQSQDRLSEFELKLMDIDSEHLGIP-DTKYSAIVEMPSSEYRRICSDLGVMGDTVRISVSKESVKFQVDGDIGKGSVCLHPSSVVDKPTEVVKISLEEPVDMIFSIRYLNYFAKAAPLSDTVTLSLSKDFPLQIEFKFGEQMGYLRYYLAPKID 270          
BLAST of Gcaud9446.t1 vs. uniprot
Match: D8S0X2_SELML (Proliferating cell nuclear antigen n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S0X2_SELML)

HSP 1 Score: 267 bits (682), Expect = 3.460e-86
Identity = 134/264 (50.76%), Postives = 194/264 (73.48%), Query Frame = 0
Query:    1 MFEAKLTDSTTIKRVLDAIKDLIDQANFDCSADGLSLQAMDTPHVCLTTMTLRSQAFEVYRCDRPLSMGINLSSFSKILKCAGPKDSVKIVANDEGADCAEFIFENESADRIAHFELKLMDIDSEHLSIPEDSDYEAIISMPSQEYRRIFSDLSIIGDTITIEITKNTACFSVEGDIGNGSLNLAQSDSADD-KNAVTINVKEPVKMTFPGKYLNTFTKAVPISDFVTLCLTDGNPLAIEFSLPDEAGFVRYFLAPKIDQDMAA 263
            M E +L   + +K+VL+AIKDL+++ANFDCS+ G SLQAMD+ HV L  + LRS+ FE YRCDR +S+G+NL++ +K+LKCAG  D + I A D+G+D   F+FE+ S D+I+ FE+KLM+IDSEHL IP D++Y++ I MPSQE+ RI  DLS IGDT+ I +TK+   F+  GDIG  ++   Q+ S D+ +NA  I ++EPV +TF  +YLN+FTKA P+++ VTL ++   P+ +E+ + D  G+VRY+LAPKI++D AA
Sbjct:    1 MLELRLVQGSLLKKVLEAIKDLVNEANFDCSSTGFSLQAMDSSHVALVALMLRSEGFEHYRCDRTISIGMNLTNMAKMLKCAGNDDIITIKA-DDGSDTVTFMFESPSQDKISDFEMKLMEIDSEHLGIP-DTEYQSSIKMPSQEFLRICKDLSSIGDTVMISVTKDGVKFTTSGDIGTANIVCRQNTSVDEPENATEIKMQEPVSLTFALRYLNSFTKATPLANIVTLSMSADLPIVVEYKIGD-MGYVRYYLAPKIEEDDAA 261          
BLAST of Gcaud9446.t1 vs. uniprot
Match: PCNA1_ARATH (Proliferating cellular nuclear antigen 1 n=58 Tax=rosids TaxID=71275 RepID=PCNA1_ARATH)

HSP 1 Score: 266 bits (679), Expect = 9.850e-86
Identity = 133/261 (50.96%), Postives = 189/261 (72.41%), Query Frame = 0
Query:    1 MFEAKLTDSTTIKRVLDAIKDLIDQANFDCSADGLSLQAMDTPHVCLTTMTLRSQAFEVYRCDRPLSMGINLSSFSKILKCAGPKDSVKIVANDEGADCAEFIFENESADRIAHFELKLMDIDSEHLSIPEDSDYEAIISMPSQEYRRIFSDLSIIGDTITIEITKNTACFSVEGDIGNGSLNLAQSDSADD-KNAVTINVKEPVKMTFPGKYLNTFTKAVPISDFVTLCLTDGNPLAIEFSLPDEAGFVRYFLAPKIDQD 260
            M E +L   + +K+VL++IKDL++ ANFDCS+ G SLQAMD+ HV L ++ LRS+ FE YRCDR LSMG+NL + SK+LKCAG  D + I A D+G D   F+FE+ + D+IA FE+KLMDIDSEHL IP D++Y +I+ MPS E+ RI  DLS IGDT+ I +TK    FS  GDIG  ++ L Q+ + D  ++A+ I +KEPV ++F  +Y+N+FTKA P+SD VT+ L+   P+ +E+ +  E G++RY+LAPKI+++
Sbjct:    1 MLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHYRCDRNLSMGMNLGNMSKMLKCAGNDDIITIKA-DDGGDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIP-DAEYHSIVRMPSNEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMKEPVSLSFALRYMNSFTKATPLSDTVTISLSSELPVVVEYKVA-EMGYIRYYLAPKIEEE 258          
BLAST of Gcaud9446.t1 vs. uniprot
Match: A0A218XQI8_PUNGR (Proliferating cell nuclear antigen n=2 Tax=Punica granatum TaxID=22663 RepID=A0A218XQI8_PUNGR)

HSP 1 Score: 267 bits (682), Expect = 2.800e-85
Identity = 134/261 (51.34%), Postives = 191/261 (73.18%), Query Frame = 0
Query:    1 MFEAKLTDSTTIKRVLDAIKDLIDQANFDCSADGLSLQAMDTPHVCLTTMTLRSQAFEVYRCDRPLSMGINLSSFSKILKCAGPKDSVKIVANDEGADCAEFIFENESADRIAHFELKLMDIDSEHLSIPEDSDYEAIISMPSQEYRRIFSDLSIIGDTITIEITKNTACFSVEGDIGNGSLNLAQSDSADD-KNAVTINVKEPVKMTFPGKYLNTFTKAVPISDFVTLCLTDGNPLAIEFSLPDEAGFVRYFLAPKIDQD 260
            M E +L   + +K++L+AIKDL+  ANFDCSA G SLQAMD+ HV L ++ LRS+AFE YRCDR +SMG+NLS+ +K+L+C+GP D + + A D+G D   F+FE+ + D+IA FE+KLMDIDSEHL IP D++Y+AI+ MPS E+ RI  DLS IGDTI I +TK    FS  GDIG+ ++   Q+ S D  ++A  I ++EPV +TF  +Y+N+FTKA P+S+ VTL L+   P+ +E+ +  E G++R++LAPKID++
Sbjct:    1 MLELRLVQGSLLKKLLEAIKDLVTDANFDCSATGFSLQAMDSSHVALVSLLLRSEAFEHYRCDRNISMGLNLSNMAKVLRCSGPDDIITLKA-DDGGDSLTFMFESPNQDKIADFEMKLMDIDSEHLGIP-DTEYQAIVRMPSAEFARICKDLSGIGDTIAISVTKEGVKFSTRGDIGSANIVCRQNTSVDKPEDATIIEMEEPVTLTFALRYINSFTKATPLSNQVTLSLSSDLPVVVEYKIA-EMGYIRFYLAPKIDEE 258          
BLAST of Gcaud9446.t1 vs. uniprot
Match: B9GIV9_POPTR (Proliferating cell nuclear antigen n=10 Tax=rosids TaxID=71275 RepID=B9GIV9_POPTR)

HSP 1 Score: 264 bits (674), Expect = 6.640e-85
Identity = 132/261 (50.57%), Postives = 186/261 (71.26%), Query Frame = 0
Query:    1 MFEAKLTDSTTIKRVLDAIKDLIDQANFDCSADGLSLQAMDTPHVCLTTMTLRSQAFEVYRCDRPLSMGINLSSFSKILKCAGPKDSVKIVANDEGADCAEFIFENESADRIAHFELKLMDIDSEHLSIPEDSDYEAIISMPSQEYRRIFSDLSIIGDTITIEITKNTACFSVEGDIGNGSLNLAQSDSADD-KNAVTINVKEPVKMTFPGKYLNTFTKAVPISDFVTLCLTDGNPLAIEFSLPDEAGFVRYFLAPKIDQD 260
            M E +L   + +K+VL+AIKDL++ ANFDCS+ G SLQAMD+ HV L  + LRS+ FE YRCDR +SMG+NL + SK+LKCAG  D +  +  D+G+D   F+FE+ + D+IA FE+KLMDIDSEHL IPE ++Y AI++MPS E+ RI  DLS IGDT+ I +TK    FS  GDIG  ++ L Q+ + D  ++A  I + EPV +TF  +Y+N+FTKA P+S+ V + L+   P+ +E+ +  E G+VRY+LAPKI++D
Sbjct:    1 MLELRLVQGSLLKKVLEAIKDLVNDANFDCSSSGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNMSMGMNLGNMSKMLKCAG-NDDIITIKGDDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPE-AEYHAIVTMPSAEFSRICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEDATVIEMNEPVSLTFALRYMNSFTKATPLSNTVKISLSSELPVVVEYKIA-EMGYVRYYLAPKIEED 258          
BLAST of Gcaud9446.t1 vs. uniprot
Match: A0A6P6W3M0_COFAR (Proliferating cell nuclear antigen n=13 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6P6W3M0_COFAR)

HSP 1 Score: 263 bits (673), Expect = 8.250e-85
Identity = 131/261 (50.19%), Postives = 187/261 (71.65%), Query Frame = 0
Query:    1 MFEAKLTDSTTIKRVLDAIKDLIDQANFDCSADGLSLQAMDTPHVCLTTMTLRSQAFEVYRCDRPLSMGINLSSFSKILKCAGPKDSVKIVANDEGADCAEFIFENESADRIAHFELKLMDIDSEHLSIPEDSDYEAIISMPSQEYRRIFSDLSIIGDTITIEITKNTACFSVEGDIGNGSLNLAQSDSADD-KNAVTINVKEPVKMTFPGKYLNTFTKAVPISDFVTLCLTDGNPLAIEFSLPDEAGFVRYFLAPKIDQD 260
            MFE +L   + +K+VLDAIKDL++ ANFDCS+ G SLQAMD+ HV L  + LRS+ FE YRCDR  SMG+NL++ +K+LKCAG  D +  +  D+G+D   F+FE+ + D+IA FE+KLMDIDSEHL IPE ++Y+AI+ MPS E+ RI  DLS IGDT+ I +TK    FS  GDIG+ ++   Q+ + D  + A  I + +PV +TF  +YLN+FTKA P+S+ VT+ L+   P+ +E+ +  E G++R++LAPKI++D
Sbjct:    1 MFELRLVQGSLLKKVLDAIKDLVNDANFDCSSSGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNFSMGMNLNNMAKMLKCAG-NDDIITIKGDDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPE-AEYQAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGSANIVCRQNTTVDKPEEATVIEMNDPVSLTFALRYLNSFTKASPLSNTVTISLSSELPVVVEYKIA-EMGYIRFYLAPKIEED 258          
The following BLAST results are available for this feature:
BLAST of Gcaud9446.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHU2_9FLOR2.100e-17493.56Proliferating cell nuclear antigen n=1 Tax=Gracila... [more]
R7QC97_CHOCR1.300e-15280.77Proliferating cell nuclear antigen (Fragment) n=1 ... [more]
A0A1X6PGT2_PORUM1.230e-9654.41Proliferating cell nuclear antigen n=1 Tax=Porphyr... [more]
A0A7S1XH84_9RHOD3.990e-9555.30Proliferating cell nuclear antigen n=1 Tax=Compsop... [more]
M2WY47_GALSU2.660e-9255.81Proliferating cell nuclear antigen n=1 Tax=Galdier... [more]
D8S0X2_SELML3.460e-8650.76Proliferating cell nuclear antigen n=2 Tax=Selagin... [more]
PCNA1_ARATH9.850e-8650.96Proliferating cellular nuclear antigen 1 n=58 Tax=... [more]
A0A218XQI8_PUNGR2.800e-8551.34Proliferating cell nuclear antigen n=2 Tax=Punica ... [more]
B9GIV9_POPTR6.640e-8550.57Proliferating cell nuclear antigen n=10 Tax=rosids... [more]
A0A6P6W3M0_COFAR8.250e-8550.19Proliferating cell nuclear antigen n=13 Tax=Mesang... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 261..279
NoneNo IPR availableGENE3D3.70.10.10coord: 1..263
e-value: 9.2E-95
score: 318.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..279
NoneNo IPR availablePANTHERPTHR11352PROLIFERATING CELL NUCLEAR ANTIGENcoord: 1..260
NoneNo IPR availableCDDcd00577PCNAcoord: 4..258
e-value: 1.47019E-78
score: 236.372
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 1..127
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 130..257
IPR000730Proliferating cell nuclear antigen, PCNAPRINTSPR00339PCNACYCLINcoord: 56..80
score: 59.43
coord: 243..260
score: 47.09
coord: 10..29
score: 49.52
coord: 111..133
score: 57.35
coord: 34..52
score: 55.39
coord: 204..218
score: 55.87
IPR000730Proliferating cell nuclear antigen, PCNATIGRFAMTIGR00590TIGR00590coord: 1..261
e-value: 5.3E-98
score: 325.6
IPR000730Proliferating cell nuclear antigen, PCNAPANTHERPTHR11352:SF0PROLIFERATING CELL NUCLEAR ANTIGENcoord: 1..260
IPR000730Proliferating cell nuclear antigen, PCNAHAMAPMF_00317DNApol_clamp_archcoord: 2..257
score: 19.700058
IPR022648Proliferating cell nuclear antigen, PCNA, N-terminalPFAMPF00705PCNA_Ncoord: 1..125
e-value: 1.4E-46
score: 157.3
IPR022649Proliferating cell nuclear antigen, PCNA, C-terminalPFAMPF02747PCNA_Ccoord: 131..256
e-value: 8.5E-37
score: 126.2
IPR022659Proliferating cell nuclear antigen, PCNA, conserved sitePROSITEPS00293PCNA_2coord: 61..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_258_length_33686_cov_5.184015contigNODE_258_length_33686_cov_5.184015:4052..4891 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9446.t1Gcaud9446.t1Gracilaria caudata M_176_S67 malemRNANODE_258_length_33686_cov_5.184015 4052..4891 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9446.t1 ID=Gcaud9446.t1|Name=Gcaud9446.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=280bp
MFEAKLTDSTTIKRVLDAIKDLIDQANFDCSADGLSLQAMDTPHVCLTTM
TLRSQAFEVYRCDRPLSMGINLSSFSKILKCAGPKDSVKIVANDEGADCA
EFIFENESADRIAHFELKLMDIDSEHLSIPEDSDYEAIISMPSQEYRRIF
SDLSIIGDTITIEITKNTACFSVEGDIGNGSLNLAQSDSADDKNAVTINV
KEPVKMTFPGKYLNTFTKAVPISDFVTLCLTDGNPLAIEFSLPDEAGFVR
YFLAPKIDQDMAAEEEEEEAEDDDNDEEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000730Pr_cel_nuc_antig
IPR022648Pr_cel_nuc_antig_N
IPR022649Pr_cel_nuc_antig_C
IPR022659Pr_cel_nuc_antig_CS