Gcaud9421.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud9421.t1
Unique Name	Gcaud9421.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	437

Homology

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BLAST of Gcaud9421.t1 vs. uniprot
Match: A0A2V3IZ72_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ72_9FLOR)

HSP 1 Score: 361 bits (927), Expect = 1.250e-118
Identity = 253/430 (58.84%), Postives = 290/430 (67.44%), Query Frame = 0

Query:    1 MTSIDEAPPTQAPEPDEDPYHVYTLRRPHERASSVVPQLPKQPEMAETRLRYRRIPAAARSGSFGSLGNHFPARFQFPTRRSLLESLTSDDESVSFAVNQKPRPKIARKR-RRRVRATKGRFPSPDSILQDFAISDEDSTDDXXXXXXXXXXEQI-DFRTGGKKNKTKMSPKASPPRIVY--------STSGKPPMLRKSSKKALSPPTKLNHSKAFSSPSTSPSXXXXXXXXXXRSADEISSHPTVVSEKTTMRASKSADTAQISRQIA-KIQPVHERPKNVIPTVLDPARTSAVPVTILPPQAMSEEQRQNFVLMPEEPVLVTRGGRSXXXXXXXXXXXXXXXXXXXXXX-ESRRKDGANYSARGSTHVTVEERKERDELGGLRDKELSVSFAHPRYTAEQAAAAKPLNAVQRLLHMLAFVRLGSLRR 418
            M +I+E  P Q P+ ++DPY VYTLRRPHERASSVVPQLPKQPEMAETRLRYRRIPAAARSGSFGSLGNHFPARFQFPTRRSLL+SLTSDDESVSF+VNQKPRPKI RKR RRR RATKGRFPSP+S++QDF ISD+D    XXX XXXXXX    D R    +  T +                    +SGKPP+  K++      P+          PSTS +          RSAD +    T     T  R SKSAD A I+RQ+     P+HERP+N++ T+LDPART+   V +  PQAMSEEQRQ FVL+PEEPVLV++  R         XXXXXXXX  XXXX E + K   N  A    H   E+R ER+ELG  RDKELSVSFAHPRYTAEQA   KPLNA+QRLLHMLAFVRLG +RR
Sbjct:    7 MAAINELQPEQLPDVEDDPYQVYTLRRPHERASSVVPQLPKQPEMAETRLRYRRIPAAARSGSFGSLGNHFPARFQFPTRRSLLDSLTSDDESVSFSVNQKPRPKIVRKRHRRRARATKGRFPSPNSVIQDFVISDDDXXXXXXXFXXXXXXXXXHDGRVSLSRRPTPLLQLXXXXXXXXXXXXXXKRKSSGKPPIPTKTAAXXXIMPSLSRR------PSTSTAS---------RSADAVD-ETTRPCHTTPTRPSKSADAAVINRQLGYHHHPIHERPRNLVATILDPARTNDAHVPVEAPQAMSEEQRQRFVLVPEEPVLVSKKSRDKGNAKRKKXXXXXXXXAGXXXXSEGKDKHMNNRQA----HCNAEQRDEREELGPTRDKELSVSFAHPRYTAEQAV--KPLNAMQRLLHMLAFVRLGGVRR 414

The following BLAST results are available for this feature:

BLAST of Gcaud9421.t1 vs. uniprot

BLAST of Gcaud9421.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IZ72_9FLOR	1.250e-118	58.84	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..372
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 335..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..372
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..277
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_1392_length_11004_cov_4.136443	contig	NODE_1392_length_11004_cov_4.136443:4254..6222 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud9421.t1	Gcaud9421.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_1392_length_11004_cov_4.136443 4254..6222 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud9421.t1 ID=Gcaud9421.t1|Name=Gcaud9421.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=437bp
MTSIDEAPPTQAPEPDEDPYHVYTLRRPHERASSVVPQLPKQPEMAETRL
RYRRIPAAARSGSFGSLGNHFPARFQFPTRRSLLESLTSDDESVSFAVNQ
KPRPKIARKRRRRVRATKGRFPSPDSILQDFAISDEDSTDDEDGDVDEEE
EEQIDFRTGGKKNKTKMSPKASPPRIVYSTSGKPPMLRKSSKKALSPPTK
LNHSKAFSSPSTSPSAPAPASSSASRSADEISSHPTVVSEKTTMRASKSA
DTAQISRQIAKIQPVHERPKNVIPTVLDPARTSAVPVTILPPQAMSEEQR
QNFVLMPEEPVLVTRGGRSDGGTKKKKMHRKKADKDSGKKKESRRKDGAN
YSARGSTHVTVEERKERDELGGLRDKELSVSFAHPRYTAEQAAAAKPLNA
VQRLLHMLAFVRLGSLRRIQKYLTLSSCRLSTPSHM*