Gcaud9416.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9416.t1
Unique NameGcaud9416.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length940
Homology
BLAST of Gcaud9416.t1 vs. uniprot
Match: A0A2V3IKM3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKM3_9FLOR)

HSP 1 Score: 263 bits (673), Expect = 2.290e-70
Identity = 285/998 (28.56%), Postives = 464/998 (46.49%), Query Frame = 0
Query:    1 MPATGDVLALCSRHNDLQVYHSGPRKDWAQAPIVLQSRTLHGFSQCRFARDPDILAAVGSSGKSKESSLGLFRVSDATLLFIIPIPISIGHIFDIYPYVSVSNAMETENVSHSVAVISDISGKSWSGPRLDLHFFSDTREPARTERLPPPEAENPXXXXXXXXXXXMDNSWKSQPTNSGGTP-FRLCRDPSPLRPLRHESPSASRSSAAMKSSESSVQTPLHNRFASWLMDNNMKQTKTSSETESQNSRRGDKASRTGEKKSLPSAPKEGALKRSDPRQIEKDATHAEFNATLNEDTTRHFENDKTAHPSDVDVQIPAQKPSTKSRSEVNTRESMSSTEAGSLPDMKNSEPQLEPHIQSKRPISSSPTEGLVSSASSRQNALKAVQPKPLVINGRDKNTSSLSETK-----ENKNSNNQRESK--PAIHVDKAPSTRNIKAFEPS-RTTKDKNGIVKRDKRKGSSNSQNKKDVPTKQCSQSELTEANSKKDSPRASPEKVSQVPTQESSAKLNGVG----ESKGLKSESSNGRKDPKIGSRD-DKCTVVAKESAKQYCLSAEGSKKMNVDRIPLDEECE--KEKIESASVISTPQSDDWTPATRFAAREHSRLKKIGNTDMKSGIEHPTPLILKKDNLGSNQSLADAHH-KQVSVGSKNE---KHAAQNINVKREVQS-SLIQRPTGIPKREMEEKNTAMENPKKEVCNA-DIIENKACETLEGAASIPKSSCDVSVSNGIPQKIASVAD------------KQFHVVSLGSGEKETLWPTKGTVQVEK---------------------KPEKSVMPV-----QEDERSDHNQITIPARLLEQCRKAFAEACRAFRVPDMNTLTNQEAYTTMLCFTEKEIGYAEKKTVAKIIYDIVGIQNACSLEMFMRAFRLILTRVRASRREQWTEVFSRATCKEGESILVFHARDLLKAEHVRNTIHMAEKWTDNALEALFERISDGMLVDLASFLQCIDEVLD 938
            MP  G +LA+CS+H++LQVYH+GPR+ W   P VL S T+  F+ CRF  D D+LAAVG+S  +K++ L +FR+S +++LF +P   S   + DIYP ++VSN      ++   A I   S    +   ++L   + +  P   +  P                    +S ++ P+ +  TP F LCR+PS +   R  SPS+S     +KSSESS +TPL++RF +W+ D                            K+S  +A   G   R+ P  +++ A      A+L              H  +   ++ AQ+    + +  +T  S+SS +  ++     + PQ     +S +P S S ++       + QN        P+      + T  + ++K     ++K SN QRE+   P+ H ++ P        + +    K+K+  ++       + +QN  D+   + S  E+  + +       +P    +V   +S   ++G      E    K   S G      G    DK     K S +Q      GS  ++  R   +   E  +E+ E  S++ +P S+DWTPATR+A R  ++          S  E+ T   LK      + S        + + GS+       A     +K    S + +  P       +  K T M+N    +  A D +  K CE  + AAS  K++  +       + I  + D            ++  V S   G  +   P +G ++ E+                     +P+ S +P+     + DE++     ++P   L++C+  FAEA +   V + NTLTNQEAYTTML F +KE  Y +KK++A++IY  VGI+N+C+LEMF+ +F  I    RA RR++WT VF+ ATC EGESILVFHARDL+K E+    +H+  KWTD+ +E++FE++SDG+LVDL SFL+ ++E+LD
Sbjct:  170 MPRFGHMLAICSKHDNLQVYHAGPRQLWKSIPTVLSSPTVRSFTVCRFMHDHDLLAAVGTSTTTKQACLLVFRISTSSVLFHLPTQPSPAAVHDIYPRIAVSNPSYDPQLNLPFARIL-ASAHPNAAALINLRLGA-SHSPDVNKSQP-----------------SSSSSSRASPSPNQDTPQFHLCREPSIVLNPRAPSPSSS----MIKSSESSTRTPLYSRFRNWVTD----------------------------KRSSQNASTSGIQWRNPPVSVQQRA------ASL------------LKHLDENGFKLAAQRSEQLTPTARSTPHSVSSPKEHAVECPSTAVPQ-----KSLQPSSGSKSQNKSKGGENAQNL-------PI------RKTHPIEKSKHPILMDSKISNEQRENDCGPSAHAEEKPKAEKKHGLDEALNCNKNKSPQMQ------GALAQN--DLKQDEISPGEINTSGTDGCWKDKAPSH-GKVVAHQSRVSVHGTKTDDQEKHCDKPRRSIGHSQLSSGPHQLDKDGPPKKTSTRQVI---NGSNSLSPIRGETNRPAEDQRERNEIISLLDSPDSNDWTPATRYAVRAQNKRGSTTAYVQNSTKEYSTLNELKIKVFCPSVSTKGVRRCTEANPGSQTNVCTSFATDKEGLKSPSNSGTALSDPVANSVPTLNAKET-MDNQISPITAARDFV--KICEDGDRAAS-SKANDGLETVEEYDKPIGLIDDDLRSRENGYGKIERAVVDSATFGTPKNDTPKQGRMRKEEGLSLKEHGNPNCKRELVVDSMRPKLSFVPLANAVLKTDEKTT---ASVPIEALKRCKDLFAEALQKVVVTERNTLTNQEAYTTMLSFVQKEGVYTDKKSIARVIYRTVGIKNSCTLEMFVESFTQIFAHSRALRRQRWTAVFTAATCDEGESILVFHARDLMKTEYEEGHVHIDRKWTDDTIESVFEQVSDGILVDLPSFLRGVEELLD 1061          
The following BLAST results are available for this feature:
BLAST of Gcaud9416.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IKM3_9FLOR2.290e-7028.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..458
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..532
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 489..504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 514..532
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..422

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_265_length_33019_cov_4.613399contigNODE_265_length_33019_cov_4.613399:17443..20358 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9416.t1Gcaud9416.t1Gracilaria caudata M_176_S67 malemRNANODE_265_length_33019_cov_4.613399 17443..20358 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9416.t1 ID=Gcaud9416.t1|Name=Gcaud9416.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=940bp
MPATGDVLALCSRHNDLQVYHSGPRKDWAQAPIVLQSRTLHGFSQCRFAR
DPDILAAVGSSGKSKESSLGLFRVSDATLLFIIPIPISIGHIFDIYPYVS
VSNAMETENVSHSVAVISDISGKSWSGPRLDLHFFSDTREPARTERLPPP
EAENPPAEQQPREQRPMDNSWKSQPTNSGGTPFRLCRDPSPLRPLRHESP
SASRSSAAMKSSESSVQTPLHNRFASWLMDNNMKQTKTSSETESQNSRRG
DKASRTGEKKSLPSAPKEGALKRSDPRQIEKDATHAEFNATLNEDTTRHF
ENDKTAHPSDVDVQIPAQKPSTKSRSEVNTRESMSSTEAGSLPDMKNSEP
QLEPHIQSKRPISSSPTEGLVSSASSRQNALKAVQPKPLVINGRDKNTSS
LSETKENKNSNNQRESKPAIHVDKAPSTRNIKAFEPSRTTKDKNGIVKRD
KRKGSSNSQNKKDVPTKQCSQSELTEANSKKDSPRASPEKVSQVPTQESS
AKLNGVGESKGLKSESSNGRKDPKIGSRDDKCTVVAKESAKQYCLSAEGS
KKMNVDRIPLDEECEKEKIESASVISTPQSDDWTPATRFAAREHSRLKKI
GNTDMKSGIEHPTPLILKKDNLGSNQSLADAHHKQVSVGSKNEKHAAQNI
NVKREVQSSLIQRPTGIPKREMEEKNTAMENPKKEVCNADIIENKACETL
EGAASIPKSSCDVSVSNGIPQKIASVADKQFHVVSLGSGEKETLWPTKGT
VQVEKKPEKSVMPVQEDERSDHNQITIPARLLEQCRKAFAEACRAFRVPD
MNTLTNQEAYTTMLCFTEKEIGYAEKKTVAKIIYDIVGIQNACSLEMFMR
AFRLILTRVRASRREQWTEVFSRATCKEGESILVFHARDLLKAEHVRNTI
HMAEKWTDNALEALFERISDGMLVDLASFLQCIDEVLDS*
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