Gcaud9413.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9413.t1
Unique NameGcaud9413.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length285
Homology
BLAST of Gcaud9413.t1 vs. uniprot
Match: A0A2V3J3H3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3H3_9FLOR)

HSP 1 Score: 342 bits (877), Expect = 1.890e-115
Identity = 166/280 (59.29%), Postives = 219/280 (78.21%), Query Frame = 0
Query:    6 LSLPSNEAGAVCGEPDPYFAHFLDWREDFAVCEGRQVHYRVIGSKKKEKKANKYPIVYLGDAGIAIAGGETLELLGGTDRRILLVDQLGVGESQDLHAQPKHQWSDLAADEVSSVLLRSDVANKKMPT--KVHLIAVGFGIQVADVLLNRSNAENTGYQVASVVAEGWSLPRDTRNVSFSALQGERVCAVEGADGGNIDILRTIYGGGNWNPSAALKDISAFVPVMALHMKDWPSLGLQGNSIREKELDGKGRIPHLEASDESLGEMEKFFDEIEGRVAQ 283
            +S P   A A+CGEPDP+FAHFL+W+EDFA  + RQVHYR+IGSKKKE+KA KYP+VYLGDAG+A+A GETLELLG TDRRIL  D LGVGESQ  +++ + +W DLAA+EVS+VLL+S +A+ K  T  K+H++AVGFGI+VADVLL RS+AE TGYQVASVVAEGWS+P + ++++F+ +QGE++CA EGA+GGNI+ILRT+Y  G W P  ALK +S  VPV+AL M+  PS+  Q   +RE+ L G GR+PHL  ++E + E++ F +E+E    Q
Sbjct:    1 MSNPLKRAEALCGEPDPFFAHFLEWQEDFAAYDRRQVHYRLIGSKKKEQKAKKYPVVYLGDAGVALASGETLELLGKTDRRILFSDLLGVGESQAFNSKDQAEWVDLAANEVSAVLLKSGIADTKAKTVPKLHIVAVGFGIEVADVLLKRSSAERTGYQVASVVAEGWSVPGNMKSITFADIQGEKLCATEGAEGGNINILRTVYQSGEWQPREALKHVSEVVPVLALRMEVSPSIAFQNTRLREEVLRGGGRLPHLMQTEECMVEIDNFLEEVESMDKQ 280          
BLAST of Gcaud9413.t1 vs. uniprot
Match: A0A7S0BEH8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BEH8_9RHOD)

HSP 1 Score: 103 bits (257), Expect = 5.160e-22
Identity = 79/261 (30.27%), Postives = 126/261 (48.28%), Query Frame = 0
Query:   13 AGAVCGEPDPYFAHFLDWREDFAVCEGRQVHYRVIGSKKKEKKANKYPIVYLGDAGIAIAGGETLELLGGTDRRILLVDQLGVGESQDLHAQPKHQWSDLAADEVSSVLLRSDVANKKMPTKVHLIAVGFGIQVA-DVLLNRSNAENTGYQVASVVAEGWSLPRDT-RNVSFSALQGE---RVCAVEGADGGNIDILRTIYGGGNWNPSAALKDISAFVPVMALHMKDWPSLGLQGNSIREKELD---GKGRIPHLEASDE 265
            A A CG+ +P++AH++DWRE  A   GR V+ RV+G++K+EK+    P++ L DAG+     ET+  L   +RR++  D LG G S  L      +    A++EV +V    ++        +H+   GFG  VA DV   + ++      V S+V E  +L   T + +  + L GE   +VC      G   D +R +Y    WN  + +    A  PV+ +  +     G +   ++E   D   G  R PHLE + E
Sbjct:   81 AEAFCGDAEPFWAHYIDWREGLAPIGGRDVYLRVLGNQKQEKRVGASPLIVLADAGLPWNYLETISALAEDNRRVVFFDALGCGNSAPLRLDSIDEIFSAASEEVLAVAQFLELKT------MHIFGHGFGAAVALDVATKQQSST-----VRSIVLESPTLQGGTDKEIGPAQLIGESNSKVCIRPSIQGAQTDTMRMVYTS-EWNKLSMVNQ--AAQPVLVVSKES----GTRPYDLKENIQDVRIGSSRSPHLERTTE 323          
BLAST of Gcaud9413.t1 vs. uniprot
Match: A0A5J4Z632_PORPP (Proline iminopeptidase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z632_PORPP)

HSP 1 Score: 81.6 bits (200), Expect = 6.260e-14
Identity = 58/174 (33.33%), Postives = 90/174 (51.72%), Query Frame = 0
Query:    2 AATVLSLPSNEAGAVCGEPDPYFAHFLDWREDF--AVCEGRQVH----YRVIGSKKKEKKANKYPIVYLGDAGIAIAGGETLELLGGTDRRILLVDQLGVGESQDLHAQPKHQWSDLAADEVSSVLLRSDVANKKMPTKVHLIAVGFGIQVADVLLNRSNAENTGYQVASVVAE 169
            AA V S+P   A A CG+ DP++AHF+DW+E+       G +       R +G++KKE+ A   P++++ D  +     E LE L  + RR+   DQLG G S    A P++   D     V+ V   + + + K+P +VH+   GFG  VA  +     AE    +VAS++ E
Sbjct:  110 AAFVSSVPVEPAAAFCGDEDPFWAHFVDWKEELIPVALSGSKAQCNILVRSLGNQKKERAAKVLPVIFIADLALPHEYLEPLEALAESQRRLYFFDQLGTGSSD---AVPENIGLDAVQLRVAQVA--AILEHYKLP-RVHVFGHGFGGAVALAI-----AEQQPQRVASLILE 272          
BLAST of Gcaud9413.t1 vs. uniprot
Match: A0A7S3XPS5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPS5_HETAK)

HSP 1 Score: 63.9 bits (154), Expect = 6.090e-8
Identity = 33/90 (36.67%), Postives = 55/90 (61.11%), Query Frame = 0
Query:   10 SNEAGAVCGEPDPYFAHFLDWREDFAVCEGRQVHYRVIGSKKKEKKANKYPIVYL-GDAGIAIAGGETLELLGGTDRRILLVDQLGVGES 98
            +  AGA CG+P P +A+ L++ +     +G Q++ RV+G +  EK+  + P++ L G  G++    ETLE +  T RR++L D LG G+S
Sbjct:   71 NRPAGAWCGDPYPAWAYTLNFNDGVIPYQGSQLYIRVVGDEYYEKRVKRKPLIVLPGGPGLSHDYLETLEAVSQTQRRVVLFDPLGTGQS 160          
The following BLAST results are available for this feature:
BLAST of Gcaud9413.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J3H3_9FLOR1.890e-11559.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0BEH8_9RHOD5.160e-2230.27Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z632_PORPP6.260e-1433.33Proline iminopeptidase n=1 Tax=Porphyridium purpur... [more]
A0A7S3XPS5_HETAK6.090e-836.67Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820alpha/beta hydrolasecoord: 27..278
e-value: 6.6E-6
score: 27.7
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 32..276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_265_length_33019_cov_4.613399contigNODE_265_length_33019_cov_4.613399:11555..12409 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9413.t1Gcaud9413.t1Gracilaria caudata M_176_S67 malemRNANODE_265_length_33019_cov_4.613399 11555..12409 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9413.t1 ID=Gcaud9413.t1|Name=Gcaud9413.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=285bp
LAATVLSLPSNEAGAVCGEPDPYFAHFLDWREDFAVCEGRQVHYRVIGSK
KKEKKANKYPIVYLGDAGIAIAGGETLELLGGTDRRILLVDQLGVGESQD
LHAQPKHQWSDLAADEVSSVLLRSDVANKKMPTKVHLIAVGFGIQVADVL
LNRSNAENTGYQVASVVAEGWSLPRDTRNVSFSALQGERVCAVEGADGGN
IDILRTIYGGGNWNPSAALKDISAFVPVMALHMKDWPSLGLQGNSIREKE
LDGKGRIPHLEASDESLGEMEKFFDEIEGRVAQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase