Gcaud9412.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9412.t1
Unique NameGcaud9412.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length310
Homology
BLAST of Gcaud9412.t1 vs. uniprot
Match: A0A2V3IQN2_9FLOR (33 kDa chaperonin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQN2_9FLOR)

HSP 1 Score: 370 bits (951), Expect = 4.790e-125
Identity = 184/241 (76.35%), Postives = 210/241 (87.14%), Query Frame = 0
Query:    1 MSSGKKDGETLQVEFRGSGPIKGITAISNGIGQIRGYVGDPNVQLPLKQGRFDVPGAIGSGIVAVVRDSMYSKQPYTGIVQITSGQVAEDLAMYLLESEQTPSALGAGVYVSPDGNVTAAGGYLLQLLPDASSRTAKIVEKNVRTLGAPTEIIRAGMTPEQIVNELMNDLSPMKLASSSPRYYCQCGVERVKRTVALIPEMEVRQLLLDYGKIEATCEFCGQTYSLAEDEVEEILATQQEP 241
            MSSGKKDG++LQ+EFRGSGP+K IT ISN + Q+RGY+G+P V LPLK G+FDVP AIGSGIVAVV+DS+YSK PYTG+VQI+SGQVA+DLA YLLESEQTPSALGAGVY+   G VTAAGGYLLQLLP ASS TA+I+E NVR    PTE++RAGMTPEQIV  LMNDL+PMKLA+ SPRY C+CGV+RVKRTVALIPE EVRQLL DYG+IEATCEFCGQ YSL  DEVE+ILA QQ+P
Sbjct:  123 MSSGKKDGDSLQIEFRGSGPLKRITTISNALAQVRGYIGNPFVNLPLKNGQFDVPAAIGSGIVAVVKDSVYSKHPYTGMVQISSGQVAQDLAQYLLESEQTPSALGAGVYLDHRGVVTAAGGYLLQLLPGASSETARILENNVRAAPTPTEMVRAGMTPEQIVALLMNDLAPMKLATCSPRYSCRCGVDRVKRTVALIPETEVRQLLADYGRIEATCEFCGQIYSLPPDEVEKILAAQQKP 363          
BLAST of Gcaud9412.t1 vs. uniprot
Match: R7Q6W4_CHOCR (Oxidative stress-dependent heat shock protein 33, GWD n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6W4_CHOCR)

HSP 1 Score: 317 bits (811), Expect = 1.360e-102
Identity = 157/228 (68.86%), Postives = 191/228 (83.77%), Query Frame = 0
Query:    1 MSSGKKDGETLQVEFRGSGPIKGITAISNGIGQIRGYVGDPNVQLPLKQGRFDVPGAIGSGIVAVVRDSMYSKQPYTGIVQITSGQVAEDLAMYLLESEQTPSALGAGVYVSPDGNVTAAGGYLLQLLPDASSRTAKIVEKNVRTLGAPTEIIRAGMTPEQIVNELMNDLSPMKLASSSPRYYCQCGVERVKRTVALIPEMEVRQLLLDYGKIEA--TCEFCGQTYSL 226
            +S+GKKDGETLQ+EFRG+GPIKGITAISNG G++RGYVG+  V +PL+ GR DV  AIG G++AVVR++ +SKQPYTG+VQI+SG+VAEDLA YL ESEQTPSALGAG+Y+   G VTAAGGYL+QLLP AS RTA+IVE+NVR +G PTE++RAG TP++IV+ LM DLSP+K+AS SPRY C CGV+RVKRTVALIPE+EVRQLL D GKIE   T   C +  +L
Sbjct:  159 LSAGKKDGETLQLEFRGAGPIKGITAISNGSGEVRGYVGNSAVSVPLRNGRVDVSAAIGKGVLAVVRNTPFSKQPYTGLVQISSGEVAEDLAKYLAESEQTPSALGAGIYLGEGGAVTAAGGYLVQLLPGASERTAEIVERNVRAIGTPTELVRAGCTPDEIVDNLMKDLSPIKVASVSPRYCCHCGVDRVKRTVALIPELEVRQLLQDQGKIEGKLTVRVCSELGAL 386          
BLAST of Gcaud9412.t1 vs. uniprot
Match: A0A5J4YHG0_PORPP (33 kDa chaperonin n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHG0_PORPP)

HSP 1 Score: 270 bits (691), Expect = 5.180e-85
Identity = 135/235 (57.45%), Postives = 180/235 (76.60%), Query Frame = 0
Query:    1 MSSGKKDGETLQVEFRGSGPIKGITAISNGIGQIRGYVGDPNVQLPL-KQGRFDVPGAIGSGIVAVVRDSMYSKQPYTGIVQITSGQVAEDLAMYLLESEQTPSALGAGVYVSPDGNVTAAGGYLLQLLPDASSRTAKIVEKNVRTLG-APTEIIRAGMTPEQIVNELMNDLSPMKLASSSPRYYCQCGVERVKRTVALIPEMEVRQLLLDYGKIEATCEFCGQTYSLAEDEVEE 233
            +S GKK  ETL +EFR +GPI+ I A+SNG G++RGYVG+P+V LP  K G+ DV  A+G GI+A VR+  + K PYTG+V I SG+VAED+A YLL+SEQTPS LGAGVYV+ +G V+AAGG+L++LLP+A  +T  ++E+NV  LG +PTE+IR+G +P  IV  LM DL+P++LA S+PRY C C  +RVKRTVALI E E++ +L + GK+EATCEFCG+ Y+L E E  E
Sbjct:  173 LSCGKKSNETLNLEFRCTGPIRSIVAVSNGQGEVRGYVGNPHVVLPPNKDGKLDVGKAVGEGILACVRNHPFWKNPYTGLVPIESGEVAEDVAKYLLDSEQTPSVLGAGVYVNKEGVVSAAGGFLVELLPEADEQTIALLERNVAELGMSPTELIRSGKSPADIVEMLMRDLNPLQLAESTPRYKCSCSTDRVKRTVALIHEDELKSILEEQGKVEATCEFCGRRYNLTEVEAWE 407          
BLAST of Gcaud9412.t1 vs. uniprot
Match: A0A6T6L864_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6L864_9RHOD)

HSP 1 Score: 257 bits (656), Expect = 2.000e-81
Identity = 128/239 (53.56%), Postives = 172/239 (71.97%), Query Frame = 0
Query:    1 MSSGKKDGETLQVEFRGSGPIKGITAISNGIGQIRGYVGDPNVQLPLK-QGRFDVPGAIGSGIVAVVRDSMYSKQPYTGIVQITSGQVAEDLAMYLLESEQTPSALGAGVYVSPDGNVTAAGGYLLQLLPDASSRTAKIVEKNVRTLG-APTEIIRAGMTPEQIVNELMNDLSPMKLASSSPRYYCQCGVERVKRTVALIPEMEVRQLLLDYGKIEATCEFCGQTYSLAEDEVEEILAT 237
            +S+GKK+GET+Q+E RG GP+K   AISNG G++RGYVGDP+V LP   +G  DV  A+G GI+AVVR+    K PYTG+  I SG+VAED+A YL +SEQTPSALGAGV V   G V AAGG+L+ +LP A+  + + VE+NV++L   PTE+IR+GM+   IV +LM DL P+++A S P+YYC CG ERV+RTV L+   ++  L+ + G +EATCEFC + Y L+ +E  E L T
Sbjct:   48 LSAGKKEGETVQLELRGDGPLKTTVAISNGRGEVRGYVGDPSVVLPPNSEGHLDVGKAVGKGILAVVRNHPMWKNPYTGLTTIVSGEVAEDVASYLADSEQTPSALGAGVLVDKKGEVVAAGGFLVSMLPGATEDSIRTVEQNVKSLKMTPTELIRSGMSATDIVGKLMKDLDPLEVAESYPKYYCSCGRERVRRTVVLLGRKDIEDLIAEQGHVEATCEFCKRCYRLSPEEAMEALNT 286          
BLAST of Gcaud9412.t1 vs. uniprot
Match: M2VZG8_GALSU (Molecular chaperone Hsp33 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VZG8_GALSU)

HSP 1 Score: 245 bits (625), Expect = 3.760e-75
Identity = 121/236 (51.27%), Postives = 170/236 (72.03%), Query Frame = 0
Query:    1 MSSGKKDGETLQVEFRGSGPIKGITAISNGIGQIRGYVGDPNVQLPL-KQGRFDVPGAIGSGIVAVVRDSMYSKQPYTGIVQITSGQVAEDLAMYLLESEQTPSALGAGVYVSPDGNVTAAGGYLLQLLPDASSRTAKIVEKNVRTLG-APTEIIRAGMTPEQIVNELMNDLSPMKLASSSPRYYCQCGVERVKRTVALIPEMEVRQLLLDYGKIEATCEFCGQTYSLAEDEVEEI 234
            +S+GKK  ET+ +EFRGSGP++ + A+++G+GQ+RGYVGD NV LP  ++G+ DV  AIG GIV V R+    KQPY G+ +I SG+VAED+A YL +SEQ  SA+ AGV+V PDG+V+AAGGYL+QLLP AS  T K++E+ + +L  +PTE+IR GM    IVN+L   L+  ++  S P Y C C ++RV+RTVAL+P+ E+ QL+   G ++  CEFC +TY L   E+E+I
Sbjct:  172 LSAGKKSDETVNIEFRGSGPLRTVVAVADGLGQVRGYVGDRNVDLPPNRKGKLDVSRAIGEGIVRVTRNHYTWKQPYQGLTRIVSGEVAEDIANYLYQSEQIFSAVAAGVFVKPDGSVSAAGGYLVQLLPGASEETLKLLEETLYSLEYSPTEMIRLGMNSTDIVNKLAEGLNIQQVHKSRPLYRCHCSIDRVERTVALLPKDEIDQLVASIGTLQVKCEFCNRTYQLTPPEIEQI 407          
BLAST of Gcaud9412.t1 vs. uniprot
Match: A0A7S0ZH95_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZH95_9RHOD)

HSP 1 Score: 234 bits (598), Expect = 9.000e-74
Identity = 116/200 (58.00%), Postives = 153/200 (76.50%), Query Frame = 0
Query:    1 MSSGKKDGETLQVEFRGSGPIKGITAISNGIGQIRGYVGDPNVQLPLK-QGRFDVPGAIGSGIVAVVRDSMYSKQPYTGIVQITSGQVAEDLAMYLLESEQTPSALGAGVYVSPDGNVTAAGGYLLQLLPDASSRTAKIVEKNVRTLG-APTEIIRAGMTPEQIVNELMNDLSPMKLASSSPRYYCQCGVERVKRTVALI 198
            +S+GKKD ET+ +EFR SGPIK I AI+NG+G+ RGYVGDP V LP    G+ DV  A+G GI+AV+R+  + KQPYTG+V I+SG+VAED+A YL +SEQTPSALGAGVYV+  G V  AGGYL++LLP     T ++VE+N+  LG  PT++ +AG + E+IV +LM DL+PM L +S+PRY C C ++RVKRT+ALI
Sbjct:    7 LSTGKKDRETVNIEFRCSGPIKSIVAIANGLGEARGYVGDPKVVLPPNADGKLDVGKAVGKGILAVIRNHPFWKQPYTGLVAISSGEVAEDIAQYLADSEQTPSALGAGVYVNRSGLVEVAGGYLVELLPGCEESTIELVERNIAELGMTPTQLFQAGFSAEEIVEKLMRDLNPMALTTSAPRYKCTCAIDRVKRTIALI 206          
BLAST of Gcaud9412.t1 vs. uniprot
Match: A0A7S1ESU0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESU0_9RHOD)

HSP 1 Score: 234 bits (598), Expect = 5.040e-72
Identity = 116/200 (58.00%), Postives = 153/200 (76.50%), Query Frame = 0
Query:    1 MSSGKKDGETLQVEFRGSGPIKGITAISNGIGQIRGYVGDPNVQLPLK-QGRFDVPGAIGSGIVAVVRDSMYSKQPYTGIVQITSGQVAEDLAMYLLESEQTPSALGAGVYVSPDGNVTAAGGYLLQLLPDASSRTAKIVEKNVRTLG-APTEIIRAGMTPEQIVNELMNDLSPMKLASSSPRYYCQCGVERVKRTVALI 198
            +S+GKKD ET+ +EFR SGPIK I AI+NG+G+ RGYVGDP V LP    G+ DV  A+G GI+AV+R+  + KQPYTG+V I+SG+VAED+A YL +SEQTPSALGAGVYV+  G V  AGGYL++LLP     T ++VE+N+  LG  PT++ +AG + E+IV +LM DL+PM L +S+PRY C C ++RVKRT+ALI
Sbjct:  135 LSTGKKDRETVNIEFRCSGPIKSIVAIANGLGEARGYVGDPKVVLPPNADGKLDVGKAVGKGILAVIRNHPFWKQPYTGLVAISSGEVAEDIAQYLADSEQTPSALGAGVYVNRSGLVEVAGGYLVELLPGCEESTIELVERNIAELGMTPTQLFQAGFSAEEIVEKLMRDLNPMALTTSAPRYKCTCAIDRVKRTIALI 334          
BLAST of Gcaud9412.t1 vs. uniprot
Match: M1VLC0_CYAM1 (Similar to heat shock protein Hsp33 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VLC0_CYAM1)

HSP 1 Score: 223 bits (569), Expect = 2.150e-67
Identity = 114/239 (47.70%), Postives = 157/239 (65.69%), Query Frame = 0
Query:    1 MSSGKKDGETLQVEFRGSGPIKGITAISNGIGQIRGYVGDPNVQLP-LKQGRFDVPGAIGSGIVAVVRDSMYSKQPYTGIVQITSGQVAEDLAMYLLESEQTPSALGAGVYVSPDGNVTAAGGYLLQLLPDASSRTAKIVEKNVRTL---GAPTEIIRAGMTPEQIVNELMNDLSPMKLASSSPRYYCQCGVERVKRTVALIPEMEVRQLLLDYGKIEATCEFCGQTYSLAEDEVEEIL 235
            ++SGKKD ET+Q+EFRG GP++ + AI++G G +RGYVGDP VQLP    G+ DV  A+G G +AVVR+     +PY GI +I +G++ +D+  YL+ SEQ PSAL  GV+V   G+V AAGGYL+QLLP+++  T   VE+NV  L   G PT++IR GM    IV +LM D+    L    P+Y C C   RV+R VAL+P  E+  +L +  ++EA CEFCG  Y L+ DE   +L
Sbjct:  120 LASGKKDLETVQMEFRGDGPLRAVVAIADGRGHVRGYVGDPQVQLPPTAAGKLDVGRAVGRGFLAVVRNHSTWSEPYRGITEIQTGEIGDDVLHYLVRSEQIPSALALGVFVQ-GGHVQAAGGYLVQLLPESTPETLDRVEENVLQLNKRGTPTQLIRDGMDAVDIVQQLMVDIDETSLRRVQPQYSCSCDASRVRRMVALLPRDEIESILREQNRLEAKCEFCGSYYELSSDETRALL 357          
BLAST of Gcaud9412.t1 vs. uniprot
Match: A0A7J7IGW0_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IGW0_9RHOD)

HSP 1 Score: 213 bits (543), Expect = 1.510e-63
Identity = 111/239 (46.44%), Postives = 155/239 (64.85%), Query Frame = 0
Query:    1 MSSGKKDGETLQVEFRGSGPIKGITAISNGIGQIRGYVGDPNVQLPLK-QGRFDVPGAIGSGIVAVVRDSMYSKQPYTGIVQITSGQVAEDLAMYLLESEQTPSALGAGVYVSPDGNVTAAGGYLLQLLPDASSRTAKIVEKNV---RTLGAPTEIIRAGMTPEQIVNELMNDLSPMKLASSSPRYYCQCGVERVKRTVALIPEMEVRQLLLDYGKIEATCEFCGQTYSLAEDEVEEIL 235
            ++SGKKD ET+Q+EFRG GP+K + AI++G   +RGYVGDP VQLPL   G+ DV  A+G G ++VVR+      PY GI  I +G++A+D+  YL+ SEQ PSAL  GV+V     V AAGGYL+QLLP  + +  ++VE+NV     LG+PT++IR GM    +V EL+ D+    L    P+Y C C   RV+R VAL+P  E+  +L +  ++EA CEFCG  Y L+ DE   ++
Sbjct:  116 LASGKKDLETVQLEFRGDGPLKVVVAIADGGACVRGYVGDPQVQLPLSASGKLDVGRAVGQGFLSVVRNHPTWPDPYRGITAIQTGEIADDVLHYLVTSEQIPSALALGVFVR-GAEVQAAGGYLVQLLPGTTEQMLELVEENVLRLNRLGSPTQLIRNGMGALDMVRELIVDIDEGTLNRVQPKYSCNCDASRVRRLVALLPRNEIESILEEQNRVEAKCEFCGSYYELSPDEARALM 353          
BLAST of Gcaud9412.t1 vs. uniprot
Match: A0A7S1EHK0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EHK0_HEMAN)

HSP 1 Score: 213 bits (543), Expect = 5.090e-63
Identity = 116/251 (46.22%), Postives = 168/251 (66.93%), Query Frame = 0
Query:    1 MSSGKKDGE--------TLQVEFRGSGPIKGITAISNGIGQIRGYVGDPNVQLPLK-QGRFDVPGAIGSGIVAVVRDSMYSKQPYTGIVQITSGQVAEDLAMYLLESEQTPSALGAGVYV-SPDGNVTAAGGYLLQLLPDASSRTAKIVEKNVRTL-GAPTEIIRAGMTPEQIVNELMNDLSPMKLASSS---PRYYCQCGVERVKRTVALIPEMEVRQLLLDYGKIEATCEFCGQTYSLAEDEVEEILAT 237
            +++GKK GE        ++Q++ RG GP+K   A ++G G++RGYV  P V LP   QG+ DV GA+G GI+ VVR++   KQPY+GI QI SG++A D+A YL ESEQTPSALGAGV V S D +V A+GG+L+Q+LP A+  T   +EKN+ +L G+PT++IR+G T   I + L   L   ++  ++   PR+ C+C +E+V RT+AL+P  E+ ++L + GKIE  CEFC + Y LA  E+E+   T
Sbjct:  143 LAAGKKTGEMYGEVEQESVQIDVRGDGPLKQSFATADGRGEVRGYVAQPFVHLPPNSQGKLDVAGAVGKGIITVVRNNPLWKQPYSGITQIVSGEIAVDMAHYLTESEQTPSALGAGVLVDSKDEHVIASGGWLVQMLPGATDETITQIEKNIGSLDGSPTDLIRSGKTANDICDILSAGLRDDEVYPATMIKPRFACKCSIEKVYRTIALLPRHEMEEVLEEQGKIEVKCEFCKRNYHLAGAELEDAYKT 393          
The following BLAST results are available for this feature:
BLAST of Gcaud9412.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQN2_9FLOR4.790e-12576.3533 kDa chaperonin n=1 Tax=Gracilariopsis chorda Ta... [more]
R7Q6W4_CHOCR1.360e-10268.86Oxidative stress-dependent heat shock protein 33, ... [more]
A0A5J4YHG0_PORPP5.180e-8557.4533 kDa chaperonin n=1 Tax=Porphyridium purpureum T... [more]
A0A6T6L864_9RHOD2.000e-8153.56Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2VZG8_GALSU3.760e-7551.27Molecular chaperone Hsp33 n=1 Tax=Galdieria sulphu... [more]
A0A7S0ZH95_9RHOD9.000e-7458.00Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S1ESU0_9RHOD5.040e-7258.00Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
M1VLC0_CYAM12.150e-6747.70Similar to heat shock protein Hsp33 n=1 Tax=Cyanid... [more]
A0A7J7IGW0_9RHOD1.510e-6346.44Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A7S1EHK0_HEMAN5.090e-6346.22Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016154Heat shock protein Hsp33, C-terminalGENE3D3.90.1280.10coord: 183..237
e-value: 3.2E-13
score: 51.2
IPR016154Heat shock protein Hsp33, C-terminalSUPERFAMILY118352HSP33 redox switch-likecoord: 180..236
IPR016153Heat shock protein Hsp33, N-terminalGENE3D3.55.30.10Hsp33 domaincoord: 1..182
e-value: 5.3E-44
score: 152.4
IPR016153Heat shock protein Hsp33, N-terminalSUPERFAMILY64397Hsp33 domaincoord: 2..189
IPR000397Heat shock protein Hsp33PFAMPF01430HSP33coord: 2..225
e-value: 1.6E-52
score: 178.5
IPR000397Heat shock protein Hsp33PANTHERPTHR3011133 KDA CHAPERONINcoord: 1..239
IPR000397Heat shock protein Hsp33CDDcd00498Hsp33coord: 1..224
e-value: 2.35912E-71
score: 220.181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_265_length_33019_cov_4.613399contigNODE_265_length_33019_cov_4.613399:10164..11497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9412.t1Gcaud9412.t1Gracilaria caudata M_176_S67 malemRNANODE_265_length_33019_cov_4.613399 10164..11497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9412.t1 ID=Gcaud9412.t1|Name=Gcaud9412.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=310bp
MSSGKKDGETLQVEFRGSGPIKGITAISNGIGQIRGYVGDPNVQLPLKQG
RFDVPGAIGSGIVAVVRDSMYSKQPYTGIVQITSGQVAEDLAMYLLESEQ
TPSALGAGVYVSPDGNVTAAGGYLLQLLPDASSRTAKIVEKNVRTLGAPT
EIIRAGMTPEQIVNELMNDLSPMKLASSSPRYYCQCGVERVKRTVALIPE
MEVRQLLLDYGKIEATCEFCGQTYSLAEDEVEEILATQQEPQVWPPLKMI
TSSSVDVFAVLSEHKRLDPAGRRTSTLNFHPFTYDESWLTEKDDAAVRRY
ILQRRSFDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016154Heat_shock_Hsp33_C
IPR016153Heat_shock_Hsp33_N
IPR000397Heat_shock_Hsp33