Gcaud9391.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9391.t1
Unique NameGcaud9391.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length278
Homology
BLAST of Gcaud9391.t1 vs. uniprot
Match: A0A2V3IX16_9FLOR (DnaJ-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX16_9FLOR)

HSP 1 Score: 284 bits (726), Expect = 6.710e-91
Identity = 197/307 (64.17%), Postives = 228/307 (74.27%), Query Frame = 0
Query:    1 MMKLGTLVVIGAMAANVFGFRYSRWAVGKDIHRAWERRQRQSTN-HS----RAEEELRRMRDAFARAEQQARQHARQQAQSXXXXXXXXXXXXXXXXXXXXXXXVRTKYAQWERRFDQGGGFYRGQFRMEFDPRMMEDILKQFGQAGRMGFRMDQR--------------------------SFSXXXXXXXXXXXXXXXXQQQQRRGDSRFEQDFDAFRFWEAMNGAQWRDYARGGANTGGVHRRVGMARHYQALGLQEGASEDEVKKAYRREVMKWHPDRYRGDDKRKAARRFREVTDAYSALTK 276
            +MKLGTLVVIGAMAANV GFRYSRWAVGKDIHRAWERRQRQS + HS    RAEEELRR+R+A+ARA              XXX XXXXX X XXXXXXXXXX VR  Y QWER+FD+G G Y   FRM+FDP++ E++++QF Q GRMGF   +                           S  XXXXXXXXXXXXXXXX  +Q+ G++R +QDF++FRFWEAMNGA+WRD+AR G + GGVHRR GMARHYQALGLQEGASE+EVKKAYRR VM+WHPDRYRG DK+ AAR+FREVTDAY+AL+K
Sbjct:  104 LMKLGTLVVIGAMAANVIGFRYSRWAVGKDIHRAWERRQRQSASFHSNARARAEEELRRIREAYARAXXXXXXXXX----XXXXRXXXXXHXKXXXXXXXXXXRVRKNYTQWERQFDRGNGTYTEHFRMDFDPKVFEEMVRQFRQTGRMGFGAPRGFGXXXXXXXXXXXXXXXXXXXXXXAGSRXXXXXXXXXXXXXXXXXXXEQQSGNARSQQDFESFRFWEAMNGAEWRDFAREGRSGGGVHRRGGMARHYQALGLQEGASEEEVKKAYRRGVMRWHPDRYRGTDKQGAARKFREVTDAYAALSK 406          
BLAST of Gcaud9391.t1 vs. uniprot
Match: A0A7S1TE84_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TE84_9RHOD)

HSP 1 Score: 86.3 bits (212), Expect = 5.550e-16
Identity = 100/293 (34.13%), Postives = 137/293 (46.76%), Query Frame = 0
Query:    3 KLGTLVVIGAMAANVFGFRYSRWAVGKDIHRAWERRQRQSTN--HSRAEEELRRMRDAFARAEQQARQHARQQAQSXXXXXXXXXXXXXXXXXXXXXXXVRTKYAQWERRFDQGGGFYRGQFRMEFDPRMMEDILKQ-------FGQA--GRMGFRM--DQRSFSXXXXXXXXXXXXXXXXQQQQRRG---DSRFEQDFDAFRFW--EAMNGAQWRDYARGGANTGGVH---RRVGMARHYQALGLQEGASEDEVKKAYRREVMKWHPDRYRGDDKRKAARRFREVTDAYSAL 274
            KLG   ++GA+AANV GFRYSRWAVGK++HRAWE +Q Q     H +  +  +R  + + +    A   A+ +  S                        +   A+ ERR  Q     R     E D R  E + +        FG A      FR+  D R   XXXXXXXXXXXXXXXX            R     + F  W  E +  ++   + +    +G  H   R  G   +Y  LG+Q+ ASE E+K A+R +  KWHPD Y+G +   AAR+FRE++ AY  L
Sbjct:   29 KLGVAFLVGAVAANVIGFRYSRWAVGKEVHRAWENQQSQERIFLHEQGRKLWQRNSEEWKQEPSVASWSAKGRQDSAT---------------------AKEAAAEKERRRRQ----QRVDAAFEADQRARETVFQAHERMRGPFGSARTSTSSFRVFVDDRVXXXXXXXXXXXXXXXXXXXXXXXXXXXTSQRSSASSEEFARWMEELLRDSRESPFGQ----SGFAHPQARPAGSKDYYATLGVQQSASEKEIKDAFRSQAKKWHPDSYQGSNPEFAARKFREISTAYEVL 292          
BLAST of Gcaud9391.t1 vs. uniprot
Match: A0A7S3CAQ8_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CAQ8_9CHLO)

HSP 1 Score: 71.6 bits (174), Expect = 5.620e-12
Identity = 31/54 (57.41%), Postives = 43/54 (79.63%), Query Frame = 0
Query:  222 YQALGLQEGASEDEVKKAYRREVMKWHPDRYRGDDKRKAARRFREVTDAYSALT 275
            YQ LG+  GAS+DEVKKAYRRE +KWHPDR+ G  K++A  +F+ +++AYS +T
Sbjct:   80 YQVLGVSPGASKDEVKKAYRREALKWHPDRHDGQGKQEAEAKFKRISEAYSNIT 133          
BLAST of Gcaud9391.t1 vs. uniprot
Match: A0A7R9XS58_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9XS58_9CHLO)

HSP 1 Score: 70.1 bits (170), Expect = 1.720e-11
Identity = 45/99 (45.45%), Postives = 56/99 (56.57%), Query Frame = 0
Query:  187 AFRFWEAMNGAQWRDYARGGANTGGVHRRVGMARHYQA----------LGLQEGASEDEVKKAYRREVMKWHPDRYRGDDKRKAARRFREVTDAYSALT 275
            A R  EA  GA   D+ R   N     RR   AR Y A          LG+  GAS DEVK+AYRRE +KWHPDR++GD K +A  RF+ ++ AY AL+
Sbjct:   31 ASRVQEATRGAT-DDFQRRDGNA----RRRESARAYAASTIEDDPHALLGVARGASADEVKRAYRREALKWHPDRHQGDAKARAEARFKRISAAYQALS 124          
BLAST of Gcaud9391.t1 vs. uniprot
Match: A0A0G0Q7R1_9BACT (Chaperone protein DnaJ n=2 Tax=Candidatus Woesebacteria TaxID=1752722 RepID=A0A0G0Q7R1_9BACT)

HSP 1 Score: 71.2 bits (173), Expect = 1.110e-10
Identity = 29/55 (52.73%), Postives = 43/55 (78.18%), Query Frame = 0
Query:  221 HYQALGLQEGASEDEVKKAYRREVMKWHPDRYRGDDKRKAARRFREVTDAYSALT 275
            +Y  LG+ +GAS DE+KKAYR++ ++WHPDR+RG DK  A +RF+E+ +AY  L+
Sbjct:    7 YYDILGVSKGASSDELKKAYRKQALEWHPDRHRGADKEAAEKRFKEINEAYQVLS 61          
BLAST of Gcaud9391.t1 vs. uniprot
Match: A0A0G0PB29_9BACT (Chaperone protein DnaJ n=3 Tax=Microgenomates group TaxID=1794810 RepID=A0A0G0PB29_9BACT)

HSP 1 Score: 69.3 bits (168), Expect = 5.030e-10
Identity = 28/55 (50.91%), Postives = 42/55 (76.36%), Query Frame = 0
Query:  221 HYQALGLQEGASEDEVKKAYRREVMKWHPDRYRGDDKRKAARRFREVTDAYSALT 275
            +Y  LG+ +GAS DE+KKAYR++ ++WHPDR+ G DK  A +RF+E+ +AY  L+
Sbjct:    7 YYDILGVSKGASADELKKAYRKQALEWHPDRHAGSDKEAAEKRFKEINEAYQVLS 61          
BLAST of Gcaud9391.t1 vs. uniprot
Match: A0A1F3M1R0_9BACT (J domain-containing protein n=1 Tax=Bacteroidetes bacterium RBG_13_44_24 TaxID=1797357 RepID=A0A1F3M1R0_9BACT)

HSP 1 Score: 69.3 bits (168), Expect = 5.070e-10
Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 0
Query:  221 HYQALGLQEGASEDEVKKAYRREVMKWHPDRYRGDDKRKAARRFREVTDAYSALT 275
            +Y  LG+ +GAS DEVKKAYR++ ++WHPDR+R DDK  A RRF+E+ +AY  L+
Sbjct:    7 YYDILGISKGASADEVKKAYRKQALEWHPDRHR-DDKEAAERRFKEINEAYQILS 60          
BLAST of Gcaud9391.t1 vs. uniprot
Match: A0A5N4D089_CAMDR (DnaJ-like protein subfamily B member 8 n=1 Tax=Camelus dromedarius TaxID=9838 RepID=A0A5N4D089_CAMDR)

HSP 1 Score: 67.4 bits (163), Expect = 5.190e-10
Identity = 30/58 (51.72%), Postives = 45/58 (77.59%), Query Frame = 0
Query:  218 MARHYQALGLQEGASEDEVKKAYRREVMKWHPDRYRGDDKRKAARRFREVTDAYSALT 275
            MA HY+ LGLQ GAS ++++KAYRR  ++WHPD+  G+ K +A RRF++V++AY  L+
Sbjct:    1 MANHYEVLGLQAGASPEDIRKAYRRLALRWHPDKNPGN-KEEAERRFKQVSEAYEVLS 57          
BLAST of Gcaud9391.t1 vs. uniprot
Match: A4S9M1_OSTLU (J domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S9M1_OSTLU)

HSP 1 Score: 69.7 bits (169), Expect = 5.880e-10
Identity = 45/99 (45.45%), Postives = 56/99 (56.57%), Query Frame = 0
Query:  187 AFRFWEAMNGAQWRDYARGGANTGGVHRRVGMARHYQA----------LGLQEGASEDEVKKAYRREVMKWHPDRYRGDDKRKAARRFREVTDAYSALT 275
            A R  EA  GA   D+ R   N     RR   AR Y A          LG+  GAS DEVK+AYRRE +KWHPDR++GD K +A  RF+ ++ AY AL+
Sbjct:   27 ASRVREATRGAT-DDFQRRDGNA----RRRESARAYAASTIEDDPHALLGVARGASADEVKRAYRREALKWHPDRHQGDAKARAEARFKRISAAYQALS 120          
BLAST of Gcaud9391.t1 vs. uniprot
Match: A0A1F8BKK3_9BACT (J domain-containing protein n=1 Tax=Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_39_25 TaxID=1802521 RepID=A0A1F8BKK3_9BACT)

HSP 1 Score: 68.9 bits (167), Expect = 7.070e-10
Identity = 27/55 (49.09%), Postives = 43/55 (78.18%), Query Frame = 0
Query:  221 HYQALGLQEGASEDEVKKAYRREVMKWHPDRYRGDDKRKAARRFREVTDAYSALT 275
            +Y  LG+ +GAS DE+KKAYR++ ++WHPD+++G DK  A +RF+E+ +AY  L+
Sbjct:    7 YYDILGVSKGASADEIKKAYRKQALEWHPDKHQGGDKEAAEKRFKEINEAYQILS 61          
The following BLAST results are available for this feature:
BLAST of Gcaud9391.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX16_9FLOR6.710e-9164.17DnaJ-like n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A7S1TE84_9RHOD5.550e-1634.13Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3CAQ8_9CHLO5.620e-1257.41Hypothetical protein (Fragment) n=2 Tax=Chloropico... [more]
A0A7R9XS58_9CHLO1.720e-1145.45Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A0G0Q7R1_9BACT1.110e-1052.73Chaperone protein DnaJ n=2 Tax=Candidatus Woesebac... [more]
A0A0G0PB29_9BACT5.030e-1050.91Chaperone protein DnaJ n=3 Tax=Microgenomates grou... [more]
A0A1F3M1R0_9BACT5.070e-1056.36J domain-containing protein n=1 Tax=Bacteroidetes ... [more]
A0A5N4D089_CAMDR5.190e-1051.72DnaJ-like protein subfamily B member 8 n=1 Tax=Cam... [more]
A4S9M1_OSTLU5.880e-1045.45J domain-containing protein n=1 Tax=Ostreococcus l... [more]
A0A1F8BKK3_9BACT7.070e-1049.09J domain-containing protein n=1 Tax=Candidatus Woe... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 38..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..101
NoneNo IPR availablePANTHERPTHR24074CO-CHAPERONE PROTEIN DJLAcoord: 177..275
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..277
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 222..240
score: 48.79
coord: 240..255
score: 42.38
coord: 259..277
score: 29.74
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 219..276
e-value: 3.5E-12
score: 56.5
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 221..276
e-value: 2.7E-16
score: 59.4
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 220..277
score: 15.686578
IPR001623DnaJ domainCDDcd06257DnaJcoord: 221..275
e-value: 1.31891E-15
score: 67.5705
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 207..277
e-value: 1.5E-16
score: 62.1
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 201..276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_559_length_22118_cov_3.843737contigNODE_559_length_22118_cov_3.843737:14655..15488 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9391.t1Gcaud9391.t1Gracilaria caudata M_176_S67 malemRNANODE_559_length_22118_cov_3.843737 14655..15488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9391.t1 ID=Gcaud9391.t1|Name=Gcaud9391.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=278bp
MMKLGTLVVIGAMAANVFGFRYSRWAVGKDIHRAWERRQRQSTNHSRAEE
ELRRMRDAFARAEQQARQHARQQAQSAKEQARARAQQQRAEGERQQRENV
RTKYAQWERRFDQGGGFYRGQFRMEFDPRMMEDILKQFGQAGRMGFRMDQ
RSFSFDDQVIEELLKAARQAQQQQRRGDSRFEQDFDAFRFWEAMNGAQWR
DYARGGANTGGVHRRVGMARHYQALGLQEGASEDEVKKAYRREVMKWHPD
RYRGDDKRKAARRFREVTDAYSALTKN*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR036869J_dom_sf