Gcaud9387.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud9387.t1 vs. uniprot
Match: A0A2V3IX49_9FLOR (Replication factor C large subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX49_9FLOR) HSP 1 Score: 670 bits (1728), Expect = 2.070e-230 Identity = 367/657 (55.86%), Postives = 465/657 (70.78%), Query Frame = 0
Query: 1 LHPFFAATAAAVSTAKERSKTSKPVLPTVDAWQCPSATVHVNSVPPSHPWRPKPQLCTITSHSTRSEA---TASS--PPPITPSFHHPFDSVCTAVS-PVSPSVSHLSSPFQ-------VVEHTSKNTNLWAEAYKNDSRIDVINGSAIKTLVDWLQKWYEAPQETADDSDADSSDSYLVDESNNKERVAVVTGRTGCGKSTVIATAARHVGLSVLEINASTCRTGKKIREIIGDALNTHRVTHTRFKFSSAKTD-GKKERGRPKSRTLIVFEDVDQLQDDEKGFWTTFQKLATAGDCRRPIVCTATTFSSQMRHVFAEVKQPLEADMQRLLINARVDQALNPPPLSYKHICFSRRTERQSLAVLARVTGSEAVKSIVDMKESLALLCPNDTRRAINLLQFWGSTGLVIPEEASTEQD-----IARRLAEAQDRISFDVLTALVQDFVTSFLFQAGSCNYLIEMSKAPSLKHQNSHCTEKSGGQSAVLDSWCESLDALSSADVIRGQAVNEKLNRSTASAGNAKELCMHTDLESLLIEAEELNCAAIRFSKKYLSFASGTQQLNDISKAALEDFPSLRRHAPPNTPYSRQSILSEYIPTLRTMAAEHGRQRSKRKGKQEGERYVRRTRSRSRKDGFSALDLDPETISILKKASIRRQ 638
LHPFFAATAAAVS+AKER+K+ KP LP +DAW+ PS+T+HVN +PP+H + + ST S A T SS P P P H P + T S P +PS SP Q V HT NTN+WAE YKNDSRIDVINGSAIK LVDWL+ WY+ PQ SD DS S++ D + +ERVA++TG TGCGKSTV+ATAARHVGLSVLEINASTCRTGK+IRE+IGDAL+THRV HTR FS K +++ P+++TL+VFE+VD L DDEKGFWTTFQKLA+A +CRRPI+CTAT F+S MR VFAEVK+P+EAD++R+ I+A+ DQ LN P L YKHI + RTERQS+AVL R++ SE+V+SI+DMK+SLALLC NDTRRAINLL FWGS GL I E A+ + A+ + EAQDRI DV+ A+VQDFV S +F GS NY ++ + NS E SG ++ L++W SL+ALS+AD IRG+ +K R+ A + + +++CMH DLES+L+EAEEL+ AI FS+K+L F SG QL+DIS A + SL++ P PYSR ++++YIP LRTMA EH ++ G + +R RRTRSRSRK+GFSALDLDPET+S LKK SI+R+
Sbjct: 182 LHPFFAATAAAVSSAKERAKSQKPQLPLLDAWEAPSSTIHVNYIPPAHSFH-------FNAFSTVSAAPHHTGSSLCPSPA-PDAHKPGSPIFTYASLPAAPS-----SPVQNDCDRQLVNHHTLNNTNIWAEHYKNDSRIDVINGSAIKRLVDWLRDWYDNPQNIQTFSDDDSVHSFMTDTTEERERVAIITGATGCGKSTVVATAARHVGLSVLEINASTCRTGKRIREVIGDALSTHRVAHTRNPFSGRKAPKAGQQKDLPQAKTLVVFEEVDVLHDDEKGFWTTFQKLASADNCRRPIICTATAFNSHMRQVFAEVKRPVEADLERIFIHAKADQPLNAPLLPYKHIHLAERTERQSVAVLTRISSSESVQSIIDMKQSLALLCHNDTRRAINLLHFWGSKGLHIAEMATARGENHDRYAAKSIIEAQDRIGLDVVRAVVQDFVASSIFCVGSKNYSMKQEPSCRSDSNNSDPAETSGERNVTLEAWSVSLEALSTADFIRGKTERQKAERNAALSCSCRDVCMHADLESVLVEAEELDVQAIYFSRKHLHFESGVHQLHDISSEATNELDSLQQQIPSRLPYSRWPVMADYIPMLRTMAVEHEKRSRDGPGMRGQDRCTRRTRSRSRKEGFSALDLDPETVSTLKKTSIQRE 825
BLAST of Gcaud9387.t1 vs. uniprot
Match: UPI00143D8FE9 (ATPase family AAA domain-containing protein 5 n=1 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143D8FE9) HSP 1 Score: 97.1 bits (240), Expect = 4.430e-17 Identity = 89/284 (31.34%), Postives = 136/284 (47.89%), Query Frame = 0
Query: 116 NLWAEAYKNDSRIDVI-NGSAIKTLVDWLQKWYEAPQETADDSDADSSDSYLVDESNNKERVAVVTGRTGCGKSTVIATAARHVGLSVLEINASTCRTGKKIREIIGDALNTHRVTHTRFK--FSSAKTDGKKERGRPKSRTLIVFEDVDQLQDDEKGFWTTFQKLATAGDCRRPIVCTATTFSSQMRHVFAEVKQPLEADMQRLLINARVDQALNPPPLSYKHICFSRRTERQSLAVLARV----TGSEAVKSIVDMKESLALLCPNDTRRAINLLQFWGSTG 392
N+W YK S +++ N A L WL KW ++ D D SSD +++ +VAV+ G GCGK+ + A +G SVLEINAS+ RTGK+I + + +A +HR+ + K F A+T+ ER P++ +LI+ EDVD + ++++GF + +LA+ + +RPIV T S + L P L HI F T +S +L + TG + S V+ LL D R+A+ LQF +TG
Sbjct: 685 NVWIFKYKPMSTQEIVGNEQAAGKLKTWLDKWKTPVKDDNSDDDFYSSDCSSNYSTSDFNQVAVLLGPHGCGKTASVYAVAEELGYSVLEINASSRRTGKRIFKELEEATKSHRIKKSDMKQTFLKAQTE---ERKIPQN-SLILMEDVDIIFEEDEGFVSAAFQLAS--NTKRPIVMTCNESCSHLNK-------------------------LAPQQL---HIQFQATTGNRSSVLLELISLAETGRKLSTSCVEN-----LLESGDLRKALLQLQFLLATG 929
BLAST of Gcaud9387.t1 vs. uniprot
Match: A0A6J0PFS9_ELAGV (LOW QUALITY PROTEIN: uncharacterized protein LOC105041329 n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6J0PFS9_ELAGV) HSP 1 Score: 94.7 bits (234), Expect = 2.500e-16 Identity = 80/340 (23.53%), Postives = 146/340 (42.94%), Query Frame = 0
Query: 116 NLWAEAYKNDSRIDVI-NGSAIKTLVDWLQKWYEAPQETADDSDA-------DSSDSYLVD-ESNNKERVAV------VTGRTGCGKSTVIATAARHVGLSVLEINASTCRTGKKIREIIGDALNTH----------------------------------------------RVTHTRFKFSSAKTDGKKERGRPKSRTLIVFEDVDQLQDDEKGFWTTFQKLATAGDCRRPIVCTATTFSSQMRHVFAEVKQPLEADMQRLLINARVDQALNPPPLSYKHICFSRRTERQSLAVLARVTGSEAVKSIVDMKESLALLCPNDTRRAINLLQFW--GSTG 392
+LW Y+ ++ +V N +I++L +WL+ W+E ++++ + + DS DSY D ++ ++E A+ +TG G GKS I A+ G V+E+NAS R G +++ G+A+ +H + T + S + + + ++TLI+FEDVD + D+++GF +T +LA G +RPI+ T+ + + H+ +D+ + L +KH + + L+++ + SE + + E L C D R+ + LLQFW G TG
Sbjct: 403 SLWMNKYQPENASEVCGNSESIRSLSEWLKSWHERGRQSSQNCKSGEKCAIEDSEDSYENDSDTGDREEAAILKNVLLITGPVGSGKSAAIYACAKEQGFEVIEVNASDLRNGAHVKQKFGEAMESHGFNRWSFEELIDPRKEHNPELLSNTVDNREADDLENFSIKMASRECEIEKTHIECSYNVIENRSALMQVANKTLILFEDVDTVFDEDRGFISTILQLA--GTAKRPIILTSNNKNPILPHL--------------------LDRVI----LEFKH-----PSSEELLSLVHMICASENAQISAQLLEHLVRSCLGDIRKTLMLLQFWCQGKTG 711
BLAST of Gcaud9387.t1 vs. uniprot
Match: Q10NR0_ORYSJ (AT hook motif family protein, expressed n=12 Tax=Oryza TaxID=4527 RepID=Q10NR0_ORYSJ) HSP 1 Score: 94.0 bits (232), Expect = 4.220e-16 Identity = 73/305 (23.93%), Postives = 132/305 (43.28%), Query Frame = 0
Query: 106 QVVEHTSKNTNLWAEAYKNDSRIDVI-NGSAIKTLVDWLQKWYEAPQETADD----------SDADSSDSYLVDESNNKERVAVVTGRTGCGKSTVIATAARHVGLSVLEINASTCRTGKKIREIIGDALNTHRVTH-----------TRFKFSSAKTDGKKERGRPKSRTLIVFEDVDQLQDDEKGFWTTFQKLATAGDCRRPIVCTATTFSSQMRHVFAEVKQPLEADMQRLLINARVDQALNPPPLSYKHICFSRRTERQSLAVLARVTGSEAVKSIVDMKESLALLCPNDTRRAINLLQFW 388
+V + NLW + Y+ ++ V N +K L +WL+ W E + S D SD+ +++++ E V ++TG GCGKS + AR G +V+E+N S R G +R+ +A +H + + ++ T G E + ++TLI+FEDVD + D+++GF +T K+ + PI+ T+ + H+ A++ + F+ + + L+ + + SE V+ V ++ + D RR + LLQFW
Sbjct: 359 EVTPKGCQTANLWTDKYRPETAAQVCGNSKHVKFLNEWLKGWDERGHRNKQNIVTNGSMNGRSCQDGSDTDYSEDASDYENVLLITGPVGCGKSAAVFACAREQGFNVIEVNTSDMRNGAYVRQKFEEATKSHGLEKWSQEEIIGLPISNSLDPASGTPGTAEYKQVINKTLILFEDVDTVFDEDRGFISTILKMVET--TKWPIILTSNKKDPPLPHLLAQLV-----------------------------LDFTYPSSAELLSHVDMICKSEGVEITVPQQKHIIDAFLGDIRRTMMLLQFW 632
BLAST of Gcaud9387.t1 vs. uniprot
Match: A0A7J7P0L8_9MAGN (ATPase_AAA_core domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7P0L8_9MAGN) HSP 1 Score: 94.0 bits (232), Expect = 4.320e-16 Identity = 79/326 (24.23%), Postives = 131/326 (40.18%), Query Frame = 0
Query: 114 NTNLWAEAYKNDSRIDVI-NGSAIKTLVDWLQKWYEAPQETADDSDA---------------DSSDSYLVDESNNKERVAVVTGRTGCGKSTVIATAARHVGLSVLEINASTCRTGKKIREIIGDALNTHRVTHTRFK--FSSAKTDGKKER---------------------------------GRPKSRTLIVFEDVDQLQDDEKGFWTTFQKLATAGDCRRPIVCTATTFSSQMRHVFAEVKQPLEADMQRLLINARVDQALNPPPLSYKHICFSRRTERQSLAVLARVTGSEAVKSIVDMKESLALLCPNDTRRAINLLQFW 388
N +LW + Y+ +V N ++K L DWL W E T +S + + SD+ ++DE N + V +VTG G GKS I AR G ++E++AS CR G +++ G+A+ + + + + +S + D K R GR ++TLI+FEDVD + +++GF + Q++A +RP++ T+ + + P L +CF + + L + V +E + E L C D R+ I LLQFW
Sbjct: 441 NNSLWTKKYEPQKSFEVCGNCDSVKFLNDWLCSWRERYSRTRINSPSGKQGIGHTHDYSWGENDSDTEILDEGTNLKNVLLVTGPVGSGKSAAIYACAREQGFHIIEVSASDCRNGAHVKQKFGEAMESFGLNNWSAEDFVASQRKDFVKFRPTQPDNPDNDEVEVIGETCKEDLDNINDSGTACGRCPNKTLILFEDVDTIFYEDRGFIASIQQIAETA--KRPMILTSNC-----------------------------EDPVLPDQLDRLEVCFRAPSPKDLLLHASTVCAAEEADIHPQLIERLIRSCHGDIRKTIMLLQFW 735
BLAST of Gcaud9387.t1 vs. uniprot
Match: UPI001CA89345 (ATPase family AAA domain-containing protein 5 n=1 Tax=Leptopilina heterotoma TaxID=63436 RepID=UPI001CA89345) HSP 1 Score: 93.6 bits (231), Expect = 5.290e-16 Identity = 83/280 (29.64%), Postives = 132/280 (47.14%), Query Frame = 0
Query: 116 NLWAEAYKNDSRIDVI-NGSAIKTLVDWLQKWYEAPQETADDSDAD--SSDSYLVDESNNKERVAVVTGRTGCGKSTVIATAARHVGLSVLEINASTCRTGKKIREIIGDALNTHRVTHTRFKFSSAKTDGKKERGRPKSRTLIVFEDVDQLQDDEKGFWTTFQKLATAGDCRRPIVCTATTFSSQMRHVFAEVKQPLEADMQRLLINARVDQALNPPPLSYKHICFSRRTERQSLAVLARVTGSEAVKSIVDMKESLALLCPNDTRRAINLLQFWGSTG 392
N+W YK S +++ N + L +WL+KW + P D+SD D SSD + +VA++ G G GK+ + A +G SVLEINAS+ R GKKI + + +A +HR+ + K S K+ K E + +LI+ EDV+ + ++++GF + LA+ + +RPIV T + S + + PL+ ++ I AL E SLA R V++ LL D R+A+ LQ+ +TG
Sbjct: 658 NVWIHKYKPRSTEEIVGNEQSAAKLKNWLEKW-KLPSRRNDNSDDDFYSSDCSSTCSISENNQVAILMGPFGSGKTASVYAVAEELGYSVLEINASSRRAGKKILKELEEATKSHRIRKSDMKQSFLKS--KVEEKKIPQNSLILMEDVNIIFEEDEGFISAAYHLAS--NTKRPIVMTCSDKCSHLNKL-----APLQIQIKFEAITGHRASAL---------------LELISLAETGRKLSPSCVET---------LLSSGDLRKALLQLQYLLATG 903
BLAST of Gcaud9387.t1 vs. uniprot
Match: UPI001C4F916A (uncharacterized protein LOC122091570 n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4F916A) HSP 1 Score: 93.6 bits (231), Expect = 5.660e-16 Identity = 83/339 (24.48%), Postives = 135/339 (39.82%), Query Frame = 0
Query: 117 LWAEAYKNDSRIDVI-NGSAIKTLVDWLQKWYE---------------APQETADDSDADSSDSYLVDESNNKERVAVVTGRTGCGKSTVIATAARHVGLSVLEINASTCRTGKKIREIIGDALNTHR------------------------VTHTRFKFSS------AKTDGKKERGRPKS-----------------RTLIVFEDVDQLQDDEKGFWTTFQKLATAGDCRRPIVCTATTFSSQMRHVFAEVKQPLEADMQRLLINARVDQALNPPPLSYKHICFSRRTERQSLAVLARVTGSEAVKSIVDMKESLALLCPNDTRRAINLLQFWGSTG 392
LW Y+ V N +++ L +WL+ W+E + Q++ D S SD+ +DE + + V +VTG G GKS+ I AR G V+E++AS R G +RE G+A+ +HR ++ T +F++ + D ++ G K +TLI+FEDVD + D++GF T Q+ A C PI+ T+ + L P L +CF+ + ++ ++ + V +E V + E + C D R+ I LLQFW G
Sbjct: 380 LWTNKYEPGKAFQVCGNDESVRFLNEWLRSWHERYLKKRKKSTDDDECSSQDSEDSSYQIGSDTENMDEGRSLKNVLLVTGPVGSGKSSAIYACAREQGFEVIEVSASDWRNGTVLREKFGEAVESHRFKWTKRNPTRLCKKPTLELVTNQQISKTVHEFNNELIELTSSADEEELAGTKKGSWNDFKNNGTACGEGAKKTLILFEDVDIIFYDDRGFITAIQQFAKTARC--PIILTSNC-----------------------------EDPLLPDNLDRLEVCFAVPSLKELVSHIYMVCAAEKVDIQPKLIERIVECCQGDIRKTIMLLQFWSQGG 687
BLAST of Gcaud9387.t1 vs. uniprot
Match: A0A653CEA3_CALMS (AAA domain-containing protein n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653CEA3_CALMS) HSP 1 Score: 92.8 bits (229), Expect = 1.010e-15 Identity = 91/322 (28.26%), Postives = 149/322 (46.27%), Query Frame = 0
Query: 117 LWAEAYKNDSRIDVI-NGSAIKTLVDWLQKWYEAPQETADDS-----DADSSDSYLVDESNNKERVA------VVTGRTGCGKSTVIATAARHVGLSVLEINASTCRTGKKIREIIGDALNTHRVTHTRFKFSSAKTD----GKKERGRPKSRTLIVFEDVDQLQDDEKGFWTTFQKLATAGDCRRPIVCTATTFSSQMRHVFAEVKQPLEADMQRLLINARVDQALNPPPLSYKHICFSRRTERQSLAVLARVTGSEAVKSIVDMKESLALLCPN--DTRRAINLLQFWGSTGLVIPEEASTEQDIARRLAEAQDRISFDV 420
+W E YK + D+I N AIK+L WL+ W +E +S +++SSD ++V + ++++ V V+ G G GKST + +G +V+EINAS+ RTGK + + + +A +H+V R K SS+ T+ + K +++ ED+D + + + F T +L T +RP++ T T F S VF Q D +R+ S+K + S + L ++ V G VD E +LL N D RR + LQFW +G I + + RR + + + DV
Sbjct: 845 MWTEKYKPRNSEDIIGNTEAIKSLKKWLEAWLNFSEEIIMNSKSKRRNSNSSDDFIVSDCSSRDTVRLPGNTLVLEGPCGTGKSTAVYAICNELGYNVIEINASSKRTGKHLLQKLQEATQSHQV---RKKESSSFTNFLQQTDSQEAADKQMCVLLVEDIDIVFEQDDNFMTALMQLVTTS--KRPMILTTTDFDS----VFV---QRFLGDFERI---------------SFKPL--SAHSLATWLQLVCLVEGM-----FVDQNEIGSLLEFNKGDVRRTMLELQFWVQSGGEIIQSDMPIKIACRRSSAEEKLVEDDV 1132
BLAST of Gcaud9387.t1 vs. uniprot
Match: A0A2T8I5G3_9POAL (ATPase_AAA_core domain-containing protein n=15 Tax=Panicum TaxID=4539 RepID=A0A2T8I5G3_9POAL) HSP 1 Score: 92.4 bits (228), Expect = 1.300e-15 Identity = 85/326 (26.07%), Postives = 133/326 (40.80%), Query Frame = 0
Query: 117 LWAEAYKNDSRIDVI-NGSAIKTLVDWLQKWYE-------APQETADDSDADSSDSYLVDESNNKERVAVVTGRTGCGKSTVIATAARHVGLSVLEINASTCRTGKKIREIIGDALNTHR---------VTHTRFKFSSAKTDGKKERGR----------------------------------PK---SRTLIVFEDVDQLQDDEKGFWTTFQKLATAGDCRRPIVCTATTFSSQMRHVFAEVKQPLEADMQRLLINARVDQALNPPPLSYKHICFSRRTERQSLAVLARVTGSEAVKSIVDMKESLALLCPNDTRRAINLLQFW 388
LW + Y+ ++ V N +K L +WL+ W E A +T D S D SD+ D +++ E V ++TG GCGKS + AR G +V+E+N S R G +R+ +A +H + R + SS G +R PK ++TLI+FEDVD + D+++GF +T K+A + PI+ T+ R D +L P L + F + + L+ +A + SE V V + + +C D RR + LLQFW
Sbjct: 412 LWTDKYRPETAAQVCGNSEHVKFLAEWLRGWDERGHKIGAANGDTNDSSYQDESDADSSDNASDCENVLLITGPVGCGKSAAVFACAREQGFNVIEVNTSDMRNGAYVRQKFEEATKSHGLEKWSQEEVIDPLRDEDSSDPDSGTPDRTEYQNSASRATRVVIDCDQQKSPVGYCSGSKVNDEAPKQVVNKTLILFEDVDTVFDEDRGFISTILKMAET--TKWPIILTSN----------------------------RKDPSL-PNLLDQLALDFKYPSNSELLSHVAMICKSEGVDVTVPQLKHVIDICLGDIRRTVMLLQFW 706
BLAST of Gcaud9387.t1 vs. uniprot
Match: A0A5P1FF89_ASPOF (AAA domain-containing protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FF89_ASPOF) HSP 1 Score: 92.4 bits (228), Expect = 1.310e-15 Identity = 76/305 (24.92%), Postives = 143/305 (46.89%), Query Frame = 0
Query: 101 LSSPFQVVEHTSKNTNLWAEAYKNDSRIDVI-NGSAIKTLVDWLQKWYEAPQETA---------DDSDADSS----DSYLVDESNNKERVAVVTGRTGCGKSTVIATAARHVGLSVLEINASTCRTGKKIREIIGDALNTHRVTHTRFKFSSAKTDGKKERGRPKSRTL-IVFEDVDQLQDDEKGFWTTFQKLATAGDCRRPIVC--TATTFSSQMRHVFAEVKQPLEADMQRLLINARVDQALNPPPLSYKHICFSRRTERQSLAVLARVTGSEAVKSIVDMKESLALLCPNDTRRAINLLQFW 388
L+S +Q + + + +LW Y+ ++ ++V N +++ L +WL+ W E +T+ D D++ S +S + DE+ +K V ++TG G GKS + A+ G V+E+N S R G ++++ G A+++H + K+S+ +G P++ ++ IV Q K W +K+A + + ++ T + R A V Q +E + +++ + + + P L + F+ T + L+ L + SE DM E L C D R+ + LLQFW
Sbjct: 452 LTSYYQRISYWPE-CSLWTNKYQPENALEVCGNRESVRLLNEWLKSWNERVLQTSTKKNLLEHCDPEDSEDSMYEIESDMDDEAIHKN-VLLITGPIGSGKSAAVYACAKEQGFEVIEVNTSDVRNGTHMKQVFGQAVDSHALN----KWSAEDPNG------PRNGSIEIVSGSSKQEATHAKISWNASEKIAISQTANKSLILFEDVDTVFDEDRGFIASVLQLVETAKRPIILTSNYRKPVLPQLLDRFVLDFNFPTSDELLSHLYMICASEKAHVSSDMLEYLVRCCLGDIRKTLMLLQFW 744 The following BLAST results are available for this feature:
BLAST of Gcaud9387.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud9387.t1 ID=Gcaud9387.t1|Name=Gcaud9387.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=649bpback to top |