Gcaud9377.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud9377.t1
Unique Name	Gcaud9377.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	229

Homology

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BLAST of Gcaud9377.t1 vs. uniprot
Match: A0A2V3J2S2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2S2_9FLOR)

HSP 1 Score: 290 bits (742), Expect = 1.860e-96
Identity = 164/241 (68.05%), Postives = 185/241 (76.76%), Query Frame = 0

Query:    1 MDNSDTNASTNRSALRQPFIDTANALAFLYKQATVAERDARDAGSRAAYQRIIQWAALKSRSADPVSAADVIGFCAAELAQLPTHTPSAERAAPSPQLSQPAGATTAPRT-DADMAHCEAPPVAYVARDDALVSDIKKLHVNPRKRQRVDISDAFIRACRDEENSFMFVPDH-----GHDANSN-LVGQNGLQTAQHNALQSKRDVKDT------HTSANEYVSRKPRHPKSHVYDKHKRK 228
            MDNS+T+ S NR+ALRQPFIDTANALA LYKQ+  AERDARDAGSR AYQRIIQWAA KSRS +P+SAADVI FCA EL QLP ++PS++RA  SP  S P  +T+  R  D +M  C+APPVAYVARDDALVSDIKKLHVNPRKRQRVDISDAFIRAC  EEN+F+F PDH      HD +SN L  QN L   Q N  QSK+DVKD       HTS N+Y SRKPR+PK H+YDKHKRK
Sbjct:    1 MDNSETHGS-NRNALRQPFIDTANALASLYKQSVTAERDARDAGSRVAYQRIIQWAAKKSRSGEPLSAADVISFCATELTQLPNNSPSSDRATNSPPQSTPPISTSQARPQDTEMPTCDAPPVAYVARDDALVSDIKKLHVNPRKRQRVDISDAFIRACSGEENAFVFSPDHLHALQNHDNSSNPLSAQNALHATQQNTFQSKKDVKDGRDMLVHHTSGNDYTSRKPRNPKMHMYDKHKRK 240

The following BLAST results are available for this feature:

BLAST of Gcaud9377.t1 vs. uniprot

BLAST of Gcaud9377.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J2S2_9FLOR	1.860e-96	68.05	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..216

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_592_length_21271_cov_4.344287	contig	NODE_592_length_21271_cov_4.344287:10225..10911 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud9377.t1	Gcaud9377.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_592_length_21271_cov_4.344287 10225..10911 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud9377.t1 ID=Gcaud9377.t1|Name=Gcaud9377.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=229bp
MDNSDTNASTNRSALRQPFIDTANALAFLYKQATVAERDARDAGSRAAYQ
RIIQWAALKSRSADPVSAADVIGFCAAELAQLPTHTPSAERAAPSPQLSQ
PAGATTAPRTDADMAHCEAPPVAYVARDDALVSDIKKLHVNPRKRQRVDI
SDAFIRACRDEENSFMFVPDHGHDANSNLVGQNGLQTAQHNALQSKRDVK
DTHTSANEYVSRKPRHPKSHVYDKHKRK*