Gcaud9371.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9371.t1
Unique NameGcaud9371.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length266
Homology
BLAST of Gcaud9371.t1 vs. uniprot
Match: A0A2V3IC45_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC45_9FLOR)

HSP 1 Score: 196 bits (499), Expect = 2.500e-56
Identity = 110/232 (47.41%), Postives = 148/232 (63.79%), Query Frame = 0
Query:    5 LTDVYGVYPVSETSDTSEVGDIPEAKLQ-PRTFEPKLLPLSPARLAPEIAPFSVPELSFFNSFSINDLGNEFLGGILSVIIVSQLHKIFQSLIYYVPGISEEAYSSYIVFSRFCSFRHIWRTFSTREPYSRNIGIRSNRRRA---GINLKRVLLPIVALALLFVAEFSTILAGTSNRREYYAERNFDPIVAAGNGTPVPRVQDIFNEYCDDFFVPTRGIFKSGKVLKCVKPV 232
            L +   V PVS       + ++P A +Q P  F+P  L      ++    PFS   LS FNSF+ NDL N+F GGILS+I+V+QLH+IF+ LIY+ PG+    YSSY+VFSR  SFR+++R F+ REP+    G RS  R     G +LK +L P+ ALALL++AE  TI+AGT+ R +++AE+NFDP ++   G   PR  D     CDDFFV TRG+F+SGKVLKCV  V
Sbjct:   19 LREYEQVVPVSTLLLMGNLSELPIASIQHPVPFDPTSLQTF-LNVSSNTPPFSASSLSLFNSFTTNDLANDFTGGILSLIVVAQLHRIFKGLIYFFPGVHNRGYSSYVVFSRLASFRYLFRLFTRREPF----GERSQHREEEEFGYSLKTILFPLTALALLYIAELVTIIAGTTMRSQHFAEQNFDPKISVVRGAQRPRRVDNLWSDCDDFFVSTRGLFESGKVLKCVSEV 245          
BLAST of Gcaud9371.t1 vs. uniprot
Match: A0A2V3ISJ2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISJ2_9FLOR)

HSP 1 Score: 130 bits (328), Expect = 8.250e-31
Identity = 73/185 (39.46%), Postives = 113/185 (61.08%), Query Frame = 0
Query:   55 FSVPELSFFNSFSINDLGNEFLGGILSVIIVSQLHKIFQSLIYYVPGISEEAYSSYIVFSRFCSFRHIWRTFSTREPYSRNIGIRS---NRRRAGI--NLKRVLLPIVALALLFVAEFSTILAGTSNRREYYAERNFDPIVAA----GNGTPVPRVQDIFNEYCDDFFVPTRGIFKSGKVLKCVK 230
            F+VP +S FNSF+ +DL N F+ GI S++I+  +  + + L+Y  PGI +  Y++YI+FSR    R+++R  S RE      G+ S   NR R  +  N + + +PI+A+ +L+  E   I+AG+  R ++ +E NFDP ++        T  PR++D  N  CDDFFVP RG+ + GKVLKCV+
Sbjct:  300 FTVPSVSRFNSFTTDDLTNNFISGIASLLILVHITHLIRGLMYAFPGIRKSRYNTYIIFSRLSRMRYLFRLLSAREE-----GVLSQIRNRPRKPVERNYRALFIPILAVIVLYTGEIGAIIAGSEVRSKFTSENNFDPRISLETTRSTSTLRPRLEDDVNPNCDDFFVPQRGLQRRGKVLKCVE 479          
BLAST of Gcaud9371.t1 vs. uniprot
Match: A0A2V3IC97_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC97_9FLOR)

HSP 1 Score: 65.9 bits (159), Expect = 6.490e-9
Identity = 30/56 (53.57%), Postives = 38/56 (67.86%), Query Frame = 0
Query:  177 RREYYAERNFDPIVAAGNGTPVPRVQDIFNEYCDDFFVPTRGIFKSGKVLKCVKPV 232
            R +++AE+NFDP ++   G   PR  D     CDDFFV TRG+F+SGKVLKCV  V
Sbjct:    2 RSQHFAEQNFDPKISVVRGAQRPRRVDNLWSDCDDFFVSTRGLFESGKVLKCVSEV 57          
The following BLAST results are available for this feature:
BLAST of Gcaud9371.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IC45_9FLOR2.500e-5647.41Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3ISJ2_9FLOR8.250e-3139.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IC97_9FLOR6.490e-953.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 173..265
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..172
NoneNo IPR availableTMHMMTMhelixcoord: 152..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_326_length_30007_cov_4.620136contigNODE_326_length_30007_cov_4.620136:24108..25583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9371.t1Gcaud9371.t1Gracilaria caudata M_176_S67 malemRNANODE_326_length_30007_cov_4.620136 24108..25583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9371.t1 ID=Gcaud9371.t1|Name=Gcaud9371.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=266bp
MSSSLTDVYGVYPVSETSDTSEVGDIPEAKLQPRTFEPKLLPLSPARLAP
EIAPFSVPELSFFNSFSINDLGNEFLGGILSVIIVSQLHKIFQSLIYYVP
GISEEAYSSYIVFSRFCSFRHIWRTFSTREPYSRNIGIRSNRRRAGINLK
RVLLPIVALALLFVAEFSTILAGTSNRREYYAERNFDPIVAAGNGTPVPR
VQDIFNEYCDDFFVPTRGIFKSGKVLKCVKPVLIDPPFQATDFIRVDVVN
PDEPLKLLKTTHAMD*
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