Gcaud9365.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9365.t1
Unique NameGcaud9365.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length201
Homology
BLAST of Gcaud9365.t1 vs. uniprot
Match: A0A5J6RLB9_GRALE (Phycocyanobilin lyase n=2 Tax=Gracilariopsis TaxID=2781 RepID=A0A5J6RLB9_GRALE)

HSP 1 Score: 310 bits (794), Expect = 9.440e-105
Identity = 137/191 (71.73%), Postives = 158/191 (82.72%), Query Frame = 0
Query:    1 MAADWSNKKQAMENPQFWAHIHVCFRPLPWRFLHAYSFYCESAYDYNLGAPYKTSVVRIEHDGSNQLELASYKIKHADEFWMGAYEPQLLESLTVDMLTRLPDACNTTYEWQPQKGVFMGASRPGKGCRIRRGGKERETYLDSKLMLSEHCYAAWDVGRDPDTDERVWGTPAGPFVFEAVCRLDHLVPQEE 191
            +AADW+N+ QAME+PQFWAH+HVCFRPL W FL  YSFYCESAYDYNLGAPYKTSVVRIE+DG   LELASYKIK  DE+WMGAYEPQLLE LT D L RLP+ACNT + W   K ++  +SRPGKGCRI+R  KE+ETYLDSK+ L++H Y+AWDVGRDP+TDE VWG  AGPF F+ V RLDHLVP E+
Sbjct:   48 LAADWANQPQAMEDPQFWAHVHVCFRPLRWHFLGGYSFYCESAYDYNLGAPYKTSVVRIENDGHGHLELASYKIKQPDEYWMGAYEPQLLEQLTTDQLLRLPEACNTAFVWDESKRMYTASSRPGKGCRIQRRAKEKETYLDSKITLTDHSYSAWDVGRDPETDELVWGAAAGPFDFQVVSRLDHLVPDEQ 238          
BLAST of Gcaud9365.t1 vs. uniprot
Match: R7Q5L5_CHOCR (Phycocyanobilin:Cys-153 beta-phycocyanin lyase, CpcT n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5L5_CHOCR)

HSP 1 Score: 291 bits (744), Expect = 4.080e-97
Identity = 126/190 (66.32%), Postives = 152/190 (80.00%), Query Frame = 0
Query:    1 MAADWSNKKQAMENPQFWAHIHVCFRPLPWRFLHAYSFYCESAYDYNLGAPYKTSVVRIEHDGSNQLELASYKIKHADEFWMGAYEPQLLESLTVDMLTRLPDACNTTYEWQPQKGVFMGASRPGKGCRIRRGGKERETYLDSKLMLSEHCYAAWDVGRDPDTDERVWGTPAGPFVFEAVCRLDHLVPQE 190
            +AADW NK Q+ ENP FWAHI VCFRPLPW  L +Y+ YCESAYD+NLGAPYK+SVV++ H+G+  LEL SYK+K  +EFWM A+EP+LLE LT D L ++P+ACNT YEW P K  +   SRPGKGCRI RGGKE+ETYLDSK+ML+E  Y AWD+G DP+TDERVWGT AGPFVF  +  LD+LVP+E
Sbjct:   50 LAADWDNKPQSYENPVFWAHIRVCFRPLPWSLLDSYTLYCESAYDFNLGAPYKSSVVQVVHNGAGHLELVSYKLKDPEEFWMAAHEPELLEPLTADQLLQMPEACNTVYEWSPAKNAYAAYSRPGKGCRICRGGKEKETYLDSKIMLTEAQYVAWDLGLDPETDERVWGTAAGPFVFSPLANLDYLVPEE 239          
BLAST of Gcaud9365.t1 vs. uniprot
Match: A0A1X6NL70_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL70_PORUM)

HSP 1 Score: 228 bits (581), Expect = 5.150e-72
Identity = 112/190 (58.95%), Postives = 130/190 (68.42%), Query Frame = 0
Query:    1 MAADWSNKKQAMENPQFWAHIHVCFRPLPWRFLHAYSFYCESAYDYNLGAPYKTSVVRI--EHDGSNQLELASYKIKHADEFWMGAYEPQLLESLTVDMLTRLPDACNTTYEWQPQKGVFMGASRPGKGCRIRRGGKERETYLDSKLMLSEHCYAAWDVGRDPDTDERVWGTPAGPFVFEAVCRLDHLVP 188
            +AADWSNK QA+ENP FWAHIHV FRPLPW  L   SFY ESAYDY LG PYKTSVV++    DG   LE  +YKIK ADEFW+G +EP+LL+ LT D L ++P  CNT Y W P + V+  A+RPGK C I R G    TYLDS  +LS   Y+ WD+GRDP+TDERVWG  AGPF F    R    VP
Sbjct:   82 IAADWSNKAQALENPPFWAHIHVVFRPLPWSLLDGISFYAESAYDYMLGNPYKTSVVKVVPTPDG-RALEFENYKIKEADEFWLGGHEPELLDGLTADRLIKMPACCNTVYTWDPAERVYRAATRPGKECIIVRQGAT--TYLDSTAVLSAEGYSPWDLGRDPETDERVWGGAAGPFDFVPEKRFADDVP 268          
BLAST of Gcaud9365.t1 vs. uniprot
Match: M2YA83_GALSU (CpcT/CpeT protein family member n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2YA83_GALSU)

HSP 1 Score: 177 bits (448), Expect = 3.400e-52
Identity = 86/187 (45.99%), Postives = 113/187 (60.43%), Query Frame = 0
Query:    1 MAADWSNKKQAMENPQFWAHIHVCFRPLPWRFLHAYSFYCESAYDYNLGAPYKTSVVRIEHDGSNQLELASYKIKHADEFWMGAYEPQLLESLTVDMLTRLPDACNTTYEWQPQKGVFMGASRPGKGCRIRRGGKERETYLDSKLMLSEHCYAAWDVGRDPDTDERVWGTPAGPFVFEAVCRLDHLV 187
            +AADWSN+ QA+ENP FW+H+ V +RPLP+  L  +S Y ES Y   L  PY+T V RI      +LEL  YKI+  +EF+ G+   + L SLT D L +LP+ CNT   W   K +F G + PGK C + R GKE  TYL + + +S+    +WD GR P TD+ +WG  AGPF F  V R  H V
Sbjct:   65 LAADWSNENQAIENPPFWSHMRVSYRPLPFELLEGFSLYSESCYQAFLKQPYRTGVYRILARNDGKLELELYKIEGEEEFYQGSRNIEKLRSLTRDRLVKLPNCCNTILSWDESKQMFSGETVPGKQCIVSRKGKE--TYLHNSVTVSKEKLTSWDTGRCPKTDKLLWGAIAGPFEFYPVARFSHEV 249          
BLAST of Gcaud9365.t1 vs. uniprot
Match: A0A5J4Z5S5_PORPP (Chromophore lyase CpcT/CpeT n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5S5_PORPP)

HSP 1 Score: 174 bits (440), Expect = 9.980e-51
Identity = 93/198 (46.97%), Postives = 115/198 (58.08%), Query Frame = 0
Query:    1 MAADWSNKKQAMENPQFWAHIHVCFRPLPWRFL------HAYSFYCESAYDYNLGAPYKTSVVRIEHD--GSNQLELASYKIKHADEF-WMGAYEPQLLESLTVDMLTRLPDACNTTYEWQPQKGVFMGASRPGKGCRIRRGGKERETYLDSKLMLSEHCYAAWDVGRDPDTDERVWGTPAGPFVFEAVCRLDHLVPQ 189
            +A DWSNK+QA ENP  WAHIHVCFRPLP  F          SFY ESAYDY +  PYK SVVRI      +  LEL SYKI    E  + G+ +  LL+  T D L +LP+ CN  YEW   + ++ G +RPGK C++ +GG     YL S+  L+E  Y +WD GRD DTDE +WG   G F F       H VP+
Sbjct:   78 LAKDWSNKQQAAENPPLWAHIHVCFRPLPKTFFASQGIPECISFYTESAYDYMISRPYKNSVVRIAPGTKANGTLELFSYKITENPELLFYGSRDRSLLDDFTCDHLAQLPEGCNLVYEWDAVERMYRGYTRPGKQCKMPKGG-----YLCSEATLTEDHYTSWDTGRDFDTDEILWGAAGGAFDFYPEESFAHEVPK 270          
BLAST of Gcaud9365.t1 vs. uniprot
Match: A0A1C0UVF6_9CYAN (Chromophore lyase CpcT/CpeT n=4 Tax=Limnothrix TaxID=132605 RepID=A0A1C0UVF6_9CYAN)

HSP 1 Score: 161 bits (408), Expect = 9.250e-47
Identity = 85/181 (46.96%), Postives = 110/181 (60.77%), Query Frame = 0
Query:    1 MAADWSNKKQAMENPQFWAHIHVCFRPLPWRFLHAYSFYCESAYDYNLGAPYKTSVVR-IEHDGSNQLELASYKIKHADEFWMGAYEPQLLESLTVDMLTRLPDACNTTYEWQPQKGVFMGASRPGKGCRIRRGGKERETYLDSKLMLSEHCYAAWDVGRDPDTDERVWGTPAGPFVFEAV 180
            MAAD+SN+ QA ENP F+AHI VC RPLP   L   SFY E AYDY L  PY+  V++ IE DG  Q+++ +Y + H  EF+  + +P  L++LT D L RL   C+  +        F G   PGK C + R GKE  TYLDS+  ++   + +WD GRDP+TDE VWG  AGPF F  V
Sbjct:   21 MAADFSNQAQAFENPPFFAHIRVCMRPLPIALLGGISFYVEQAYDYALNQPYRVRVLKLIEVDG--QIQIENYAVAHEQEFFGASRQPDRLQALTADRLERL---CHCNFLVSRTGQTFTGQVEPGKACMVTRKGKE--TYLDSQFEITADRFVSWDRGRDPETDEHVWGAVAGPFDFVKV 194          
BLAST of Gcaud9365.t1 vs. uniprot
Match: K9XEQ3_9CHRO (Chromophore lyase CpcT/CpeT n=7 Tax=Cyanobacteria TaxID=1117 RepID=K9XEQ3_9CHRO)

HSP 1 Score: 160 bits (404), Expect = 5.460e-46
Identity = 81/177 (45.76%), Postives = 114/177 (64.41%), Query Frame = 0
Query:    1 MAADWSNKKQAMENPQFWAHIHVCFRPLPWRFLHAYSFYCESAYDYNLGAPYKTSVVRIEHDGSNQLELASYKIKHADEFWMGAYEPQLLESLTVDMLTRLPDACNTTYEWQPQKGVFMGASRPGKGCRIRRGGKERETYLDSKLMLSEHCYAAWDVGRDPDTDERVWGTPAGPFVF 177
            MAAD+SN+ QA ENP F+AHI VC RPLP   L   SFY E AYDY L  PY+  V+++ + G +++ + +Y IK   +F+  + EPQ L ++T++ L +LP  CN   EW      F G+  PGKGC + R  K+++TYLDS+  + +  + + D GRDP+TDE VWG+ AGPF F
Sbjct:   35 MAADFSNQAQAFENPPFFAHIRVCMRPLPLETLSGVSFYVEQAYDYMLNNPYRVRVLKLVNAG-DRITIENYLIKDEQQFYGASREPQRLNAITLERLEKLP-GCNMLVEWTGTS--FKGSVEPGKGCIVVR--KDKKTYLDSEFEIDQERFISLDRGRDPETDEHVWGSVAGPFHF 205          
BLAST of Gcaud9365.t1 vs. uniprot
Match: A0A6H1U367_9CYAN (Chromophore lyase CpcT/CpeT n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1U367_9CYAN)

HSP 1 Score: 159 bits (401), Expect = 9.080e-46
Identity = 82/177 (46.33%), Postives = 114/177 (64.41%), Query Frame = 0
Query:    1 MAADWSNKKQAMENPQFWAHIHVCFRPLPWRFLHAYSFYCESAYDYNLGAPYKTSVVRIEHDGSNQLELASYKIKHADEFWMGAYEPQLLESLTVDMLTRLPDACNTTYEWQPQKGVFMGASRPGKGCRIRRGGKERETYLDSKLMLSEHCYAAWDVGRDPDTDERVWGTPAGPFVF 177
            MAAD+SN++QA+ENP F+AHI VC RPLPW  L   S Y E AYDY LG PY+  V+++   G +++++ +YKI   ++F+  A E Q L+ LT + L ++P +     EW  +   F GA  PGK C + R GK   TYLDS+  ++   + + D GRDP+TDE VWG+ AGPFVF
Sbjct:   14 MAADFSNQEQAIENPPFFAHIRVCMRPLPWELLDGLSLYLEQAYDYMLGQPYRVRVLKLIPTG-DRIQIENYKIDEQEQFFGAAREVQRLQELTRERLEKIPGSTFIA-EWTGEG--FKGAIEPGKKCIVVRKGKT--TYLDSQFEITPEVFISHDRGRDPETDEHVWGSVAGPFVF 184          
BLAST of Gcaud9365.t1 vs. uniprot
Match: UPI001ABA8043 (chromophore lyase CpcT/CpeT n=1 Tax=Aetokthonos hydrillicola TaxID=1550245 RepID=UPI001ABA8043)

HSP 1 Score: 157 bits (398), Expect = 2.660e-45
Identity = 80/177 (45.20%), Postives = 109/177 (61.58%), Query Frame = 0
Query:    1 MAADWSNKKQAMENPQFWAHIHVCFRPLPWRFLHAYSFYCESAYDYNLGAPYKTSVVRIEHDGSNQLELASYKIKHADEFWMGAYEPQLLESLTVDMLTRLPDACNTTYEWQPQKGVFMGASRPGKGCRIRRGGKERETYLDSKLMLSEHCYAAWDVGRDPDTDERVWGTPAGPFVF 177
            MA+D+SN++QA ENP F+AHI VC RPLP   L   S Y E AYDY L  PY+  V+++  D  + +E+ +Y +K   EF+  + +PQ L++LT D L +LP  C    EW  Q   F G   PGK C + R G++  TYLDS+  + E  + + D GRDP+TDE +WG  AGPF F
Sbjct:   14 MASDFSNQEQAFENPPFFAHIRVCMRPLPLEVLSGVSLYLEQAYDYELNHPYRVRVLKLV-DAGDHIEIENYSVKEEQEFYGASRDPQRLKALTGDRLEKLP-GCTFIVEWTGQS--FKGKVEPGKSCFVVRKGQK--TYLDSEFEIDEEKFVSHDRGRDPETDEHLWGAIAGPFQF 184          
BLAST of Gcaud9365.t1 vs. uniprot
Match: UPI0016830940 (chromophore lyase CpcT/CpeT n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI0016830940)

HSP 1 Score: 156 bits (395), Expect = 6.690e-45
Identity = 79/177 (44.63%), Postives = 110/177 (62.15%), Query Frame = 0
Query:    1 MAADWSNKKQAMENPQFWAHIHVCFRPLPWRFLHAYSFYCESAYDYNLGAPYKTSVVRIEHDGSNQLELASYKIKHADEFWMGAYEPQLLESLTVDMLTRLPDACNTTYEWQPQKGVFMGASRPGKGCRIRRGGKERETYLDSKLMLSEHCYAAWDVGRDPDTDERVWGTPAGPFVF 177
            MAAD+SN++QA ENP  +AHI VC RPLP   L   SF  E AYDY L  PY+  V+++  + S+ +E+ +Y IK  ++F+  + +P+ L++L  D L +LP  CN   EW+     F G  +PGK C + R GK   TYLDS   + E  + + D GRDP+TDE +WG+ AGPF F
Sbjct:   14 MAADFSNQEQAFENPPLYAHIRVCMRPLPMEVLSGVSFIVEQAYDYMLNNPYRVRVLKLI-ETSSHIEIENYTIKQEEQFYGASRDPKRLQALKADQLEKLP-GCNMIVEWEGNS--FKGHVQPGKACMVFRKGKN--TYLDSSFEIDEEKFISIDRGRDPETDEHIWGSLAGPFYF 184          
The following BLAST results are available for this feature:
BLAST of Gcaud9365.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J6RLB9_GRALE9.440e-10571.73Phycocyanobilin lyase n=2 Tax=Gracilariopsis TaxID... [more]
R7Q5L5_CHOCR4.080e-9766.32Phycocyanobilin:Cys-153 beta-phycocyanin lyase, Cp... [more]
A0A1X6NL70_PORUM5.150e-7258.95Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2YA83_GALSU3.400e-5245.99CpcT/CpeT protein family member n=1 Tax=Galdieria ... [more]
A0A5J4Z5S5_PORPP9.980e-5146.97Chromophore lyase CpcT/CpeT n=1 Tax=Porphyridium p... [more]
A0A1C0UVF6_9CYAN9.250e-4746.96Chromophore lyase CpcT/CpeT n=4 Tax=Limnothrix Tax... [more]
K9XEQ3_9CHRO5.460e-4645.76Chromophore lyase CpcT/CpeT n=7 Tax=Cyanobacteria ... [more]
A0A6H1U367_9CYAN9.080e-4646.33Chromophore lyase CpcT/CpeT n=3 Tax=Cyanobacteria ... [more]
UPI001ABA80432.660e-4545.20chromophore lyase CpcT/CpeT n=1 Tax=Aetokthonos hy... [more]
UPI00168309406.690e-4544.63chromophore lyase CpcT/CpeT n=1 Tax=Microcoleus sp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010404Chromophore lyase CpcT/CpeTPFAMPF06206CpeTcoord: 1..178
e-value: 4.2E-43
score: 147.4
IPR010404Chromophore lyase CpcT/CpeTPANTHERPTHR35137CHROMOPHORE LYASE CRL, CHLOROPLASTICcoord: 1..180
IPR010404Chromophore lyase CpcT/CpeTHAMAPMF_01460Chrphore_lyase_CpxTcoord: 1..183
score: 25.450031
IPR010404Chromophore lyase CpcT/CpeTCDDcd16338CpcTcoord: 1..178
e-value: 8.04962E-55
score: 170.572
IPR038672Chromophore lyase CpcT/CpeT superfamilyGENE3D2.40.128.590CpcT/CpeT domaincoord: 1..195
e-value: 1.8E-47
score: 163.7
NoneNo IPR availablePANTHERPTHR35137:SF1CHROMOPHORE LYASE CRL, CHLOROPLASTICcoord: 1..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2469_length_5576_cov_3.055424contigNODE_2469_length_5576_cov_3.055424:4492..5094 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9365.t1Gcaud9365.t1Gracilaria caudata M_176_S67 malemRNANODE_2469_length_5576_cov_3.055424 4492..5094 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9365.t1 ID=Gcaud9365.t1|Name=Gcaud9365.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=201bp
MAADWSNKKQAMENPQFWAHIHVCFRPLPWRFLHAYSFYCESAYDYNLGA
PYKTSVVRIEHDGSNQLELASYKIKHADEFWMGAYEPQLLESLTVDMLTR
LPDACNTTYEWQPQKGVFMGASRPGKGCRIRRGGKERETYLDSKLMLSEH
CYAAWDVGRDPDTDERVWGTPAGPFVFEAVCRLDHLVPQEEREETAAFTA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010404CpcT/CpeT
IPR038672CpcT/CpeT_sf