Gcaud9354.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9354.t1
Unique NameGcaud9354.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length139
Homology
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BLAST of Gcaud9354.t1 vs. uniprot
Match: A0A2V3J3A9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3A9_9FLOR)

HSP 1 Score: 196 bits (497), Expect = 2.000e-60
Identity = 105/131 (80.15%), Postives = 117/131 (89.31%), Query Frame = 0 
Query:    8 PAVSTSRSSRSHYSRAPIVKPSAAEEELVRKIHRKVGGPSKLSTYDDPAKVRHVVIEALAMEQVDVNEADRIRRGQLSVFERRVVRTVTNRGAAVRSRMRQRKQVAQLKHELRVRDMRCRQLENVIKSLCS 138
            P V+  RS+RS YSRAPI KP+ AEEELVRKIHRKVGGPSKLSTYDDPAKVRHVVIEALA EQ+  ++  RIRRGQLSVFERRVVRTVTNRGAAVRSRMRQR+QVAQLKHELR+RD+R RQLE V++ LC+
Sbjct:   22 PPVTKPRSTRSSYSRAPIAKPTPAEEELVRKIHRKVGGPSKLSTYDDPAKVRHVVIEALATEQLHADDTARIRRGQLSVFERRVVRTVTNRGAAVRSRMRQRRQVAQLKHELRLRDVRVRQLEGVVRVLCA 152
The following BLAST results are available for this feature:
BLAST of Gcaud9354.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3A9_9FLOR2.000e-6080.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..139
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 89..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_5601_length_1505_cov_2.608911contigNODE_5601_length_1505_cov_2.608911:850..1265 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9354.t1Gcaud9354.t1Gracilaria caudata M_176_S67 malemRNANODE_5601_length_1505_cov_2.608911 850..1265 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9354.t1 ID=Gcaud9354.t1|Name=Gcaud9354.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=139bp
MKAALTTPAVSTSRSSRSHYSRAPIVKPSAAEEELVRKIHRKVGGPSKLS
TYDDPAKVRHVVIEALAMEQVDVNEADRIRRGQLSVFERRVVRTVTNRGA
AVRSRMRQRKQVAQLKHELRVRDMRCRQLENVIKSLCSX
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