Gcaud9349.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9349.t1
Unique NameGcaud9349.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length293
Homology
BLAST of Gcaud9349.t1 vs. uniprot
Match: A0A2V3IYK9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYK9_9FLOR)

HSP 1 Score: 331 bits (848), Expect = 3.250e-109
Identity = 152/242 (62.81%), Postives = 182/242 (75.21%), Query Frame = 0
Query:    1 MPRKERPSDLTLSHEQSFSWDWLFSNASGRAWLRRHCDGRLVTRHPNTRQPQYSLYIHKPLERWEIEHAVVMFRIPKQRMYSNYLHLSLHYNASRSVKEPLYSFLHRSEFWSQHTKLLIGRPYRDKRLITEREARFAVQLVQQQLPFVGLTEQFRLSCRLFHAKFGGVPHLVQFENVRPSLSRYKRADSRNESFRYDETQFRDWVDSADEMVYAAAQTRFWDDVAQFKSEIEKDGLGEVLIK 242
            +PR ERP DL +S E +F WDW F N +GR WL  HC  RLVT HP T++ +YS ++H+PL+RWEI H   +FR+P+QR YSNY+HLS HYN SR   E LY FL R EFWSQH KLL+GR YRD+R+IT  EAR A ++V   + F GLTE+FRLSCRLFHA FGGVPHL+QFENVRP L RYK    R ESFRYDET+F+DW D ADE+VY AA+ RFW+DV ++K EIE DGLG V IK
Sbjct:  154 VPRLERPKDLEVSVEATFMWDWFFRNKTGRQWLDDHCKDRLVTPHPTTKKNEYSFHLHRPLQRWEIPHTASVFRMPRQRSYSNYMHLSKHYNESRQPFETLYDFLKREEFWSQHAKLLLGRKYRDQRVITIPEARTAAKIVSDHIAFAGLTEEFRLSCRLFHAMFGGVPHLLQFENVRPGLDRYKHKGRRTESFRYDETEFKDWRDEADEIVYEAARNRFWNDVRKWKDEIELDGLGPVHIK 395          
BLAST of Gcaud9349.t1 vs. uniprot
Match: R7QCW4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCW4_CHOCR)

HSP 1 Score: 308 bits (790), Expect = 3.260e-100
Identity = 142/242 (58.68%), Postives = 181/242 (74.79%), Query Frame = 0
Query:    1 MPRKERPSDLTLSHEQSFSWDWLFSNASGRAWLRRHCDGRLVTRHPNTRQPQYSLYIHKPLERWEIEHAVVMFRIPKQRMYSNYLHLSLHYNASRSVKEPLYSFLHRSEFWSQHTKLLIGRPYRDKRLITEREARFAVQLVQQQLPFVGLTEQFRLSCRLFHAKFGGVPHLVQFENVRPSLSRYKRADSRNESFRYDETQFRDWVDSADEMVYAAAQTRFWDDVAQFKSEIEKDGLGEVLIK 242
            +PRKERP ++ L+  ++ SWDWLF N SGR WLR HC  RLVT HP T    YSLY+H+ L+ WE  +AV  FR+P QRMYSNY+HLSLHYN SR  +E L SFL + +FWSQ TK+L+GR YRD R ++  +A+ AV +V++ L FVGLTE+F LSCRLFHA FGGVPH  QFEN+RP +SRY  + + + SFRY E+QF  W D+ADE+VY AA+ RFW DV Q K++IE DGLGEV+++
Sbjct:  167 VPRKERPQEMHLALPETLSWDWLFKNQSGRGWLRTHCRERLVTHHPITGSLHYSLYMHRALKNWETVNAVAFFRLPLQRMYSNYMHLSLHYNESREPRESLQSFLTKKQFWSQQTKMLLGRHYRDPRPVSMVDAQKAVLIVKESLMFVGLTEEFVLSCRLFHATFGGVPHRAQFENIRPGISRYNSSVTTSSSFRYSESQFEGWSDAADELVYQAAKVRFWSDVKQLKAKIEVDGLGEVVVQ 408          
BLAST of Gcaud9349.t1 vs. uniprot
Match: A0A7S1EQG6_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQG6_9RHOD)

HSP 1 Score: 81.3 bits (199), Expect = 1.140e-13
Identity = 55/181 (30.39%), Postives = 90/181 (49.72%), Query Frame = 0
Query:   58 HKPLERWEIEHAVVMFRIPKQRMYSNYLHL------SLHYNASRSVKEPLYSFLHRSEFWSQHTKLLIGRPYRDKRLITEREARFAVQLVQQQLPFVGLTEQFRLSCRLFHAKFGGVPHLVQFENVRPSLSRYKRADSRNESFRYDETQFRDWVDSADEMVYAAAQTRFWDDVAQFKSEIE 232
            H+P+ +      V +FR P QR+ S Y H          ++  + +K  +  F+      S + K+L G+   +K  + +RE   A+ LV+ Q  F+G+T  +  S  L+HA FGG  +  +F NVR    + K   SR     YDE+    +VDS DE VY  A  +F +++ ++K  I+
Sbjct:  220 HEPIRKLHYGRMVGLFRKPSQRLISAYYHGRHLFGGDFKHDIHKLMKMNVSQFVRFDGASSCYVKMLNGKYCGEKYNVNQREVENALNLVESQFLFIGITHYYDASVLLWHAMFGGPVYSFEFVNVRVGR-KMKTLKSRE----YDESVLDGFVDSFDEFVYEIALRKFKENLKKYKIPID 395          
BLAST of Gcaud9349.t1 vs. uniprot
Match: A0A812JK74_9DINO (Hypothetical protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812JK74_9DINO)

HSP 1 Score: 70.1 bits (170), Expect = 4.600e-10
Identity = 72/245 (29.39%), Postives = 99/245 (40.41%), Query Frame = 0
Query:    9 DLTLSHEQSFSWDWLFSNASGRAWLRRHCDGRLVTRHPNTRQPQYSLYIHKPLERWEIE--HAVVMFRIPKQRMYSNYLH-----LSLHY----------------NASRSVKE-PLYSFLHRSEFW---------SQHTKLLIGRPYRDKRLITEREARFAVQLVQQQLPFVGLTEQFRLSCRLFHAKFGGVPHLVQFENVRPSLSRYKRADSRNESFRYDETQFRDWVDSADEMVYAAAQTRF 220
            DLTL  E+     WL     G  +  + C     +   NT  P      H P+  +  +  H V MFR P QR+ S Y        ++ Y                N + SV+  P    L  +E W         ++H       P R K  +T  +A  A + V++   FVG+TE++ LS  L H  FGG      FEN  PS         +N    YD ++ R W D  DE+VYAAAQ  F
Sbjct:   74 DLTLD-EELLGPCWL--EVFGLDYCVKLCQEEKFSCPRNTSLP------HHPMVNFSAQKGHLVGMFRDPDQRILSGYHDDFNNFAAVDYIDHLEDMISDPDLDMENCTASVRGLPKVPILEFAEGWKGGMTYQLVTEHPTTQTLDPMRPK--MTRADAEEAARRVREGFAFVGITEEWDLSMCLLHKMFGGACKTSDFENANPSYP------GKNAELDYDTSELRGWHDDVDEVVYAAAQDVF 301          
The following BLAST results are available for this feature:
BLAST of Gcaud9349.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IYK9_9FLOR3.250e-10962.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QCW4_CHOCR3.260e-10058.68Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1EQG6_9RHOD1.140e-1330.39Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A812JK74_9DINO4.600e-1029.39Hypothetical protein n=3 Tax=Symbiodinium TaxID=29... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 6..239
e-value: 1.8E-7
score: 32.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1027_length_14887_cov_3.970330contigNODE_1027_length_14887_cov_3.970330:7237..8115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9349.t1Gcaud9349.t1Gracilaria caudata M_176_S67 malemRNANODE_1027_length_14887_cov_3.970330 7237..8115 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9349.t1 ID=Gcaud9349.t1|Name=Gcaud9349.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=293bp
MPRKERPSDLTLSHEQSFSWDWLFSNASGRAWLRRHCDGRLVTRHPNTRQ
PQYSLYIHKPLERWEIEHAVVMFRIPKQRMYSNYLHLSLHYNASRSVKEP
LYSFLHRSEFWSQHTKLLIGRPYRDKRLITEREARFAVQLVQQQLPFVGL
TEQFRLSCRLFHAKFGGVPHLVQFENVRPSLSRYKRADSRNESFRYDETQ
FRDWVDSADEMVYAAAQTRFWDDVAQFKSEIEKDGLGEVLIKPAAERYRT
HVLRQHRRAGVNAIVPYHHRLSAPPPPQQQQQQQQQQQQQQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase