Gcaud9338.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9338.t1
Unique NameGcaud9338.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length199
Homology
BLAST of Gcaud9338.t1 vs. uniprot
Match: A0A2V3IJW6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJW6_9FLOR)

HSP 1 Score: 322 bits (824), Expect = 2.290e-109
Identity = 135/198 (68.18%), Postives = 157/198 (79.29%), Query Frame = 0
Query:    1 MCSACKLKPFNPFTGHFYDCAAIYDLDDPACQAKLKHYAAMNKHCDPIRLKQVQNFNDPWNKKGLDYFVYSVCEECCDCVPIGARVEQHNWRANNNQLLNSKRGNCPAHAFYDVCAVLPNIRFSKNPGGEDHWDWPKICPLITKWQFSPASKNWLTKSYVNMDWKINRFLVWFFWDNSCGYVNTWKNCVALEHAQKRV 198
            +C ACKLKPFNP  G FYDC +IY+L DP CQ +L+ YA    HCDP+RL+Q  +F++P N + LDYFVYSVCEECCDCVPIG++  ++ WRA  N LL SKRGNCPAHA++D+C VLP IRFSKN  G+DHWDWP ICPL+TKW FS  S+NWL KSYV MDW+INRFLVWFFWDN CG   TWKNCV LE AQKRV
Sbjct:   48 LCRACKLKPFNPNNGQFYDCTSIYNLTDPQCQQELRLYARWQAHCDPVRLRQTADFSNPSNVRALDYFVYSVCEECCDCVPIGSKTAEYGWRAPTNNLLASKRGNCPAHAYFDICKVLPKIRFSKNINGQDHWDWPMICPLLTKWLFSKNSQNWLKKSYVYMDWRINRFLVWFFWDNRCGNEVTWKNCVNLESAQKRV 245          
BLAST of Gcaud9338.t1 vs. uniprot
Match: A0A2V3IQT2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQT2_9FLOR)

HSP 1 Score: 232 bits (591), Expect = 6.190e-74
Identity = 111/200 (55.50%), Postives = 130/200 (65.00%), Query Frame = 0
Query:    1 MCSACKLKPFNPFTGHFYDCAAIYDLDDPACQAKLKHYAAMNKHCDPIRLKQVQNFNDPWNKKGLDYFVYSVCEECCDCVPIGARVEQHNWRANNNQLLNSKRGNCPAHAFYDVCAVLPNIRFSKNPGGED--HWDWPKICPLITKWQFSPASKNWLTKSYVNMDWKINRFLVWFFWDNSCGYVNTWKNCVALEHAQKRV 198
            MC+ CKLKP  P  G F DCA+IYDLDDPAC+ +L+ YA  NKHCDP R+ QVQ+     N+  LDYFVYSVCEECCDC+P GA   Q+  R     L N+ RGNCPAHA YD+C V PNI+++   G ED  H DWPKIC  I KW FS   +NWL KS VNMDW+I RFL  F+ D  C     W  C  LE  Q R+
Sbjct:   48 MCNQCKLKPHLP-DGQFADCASIYDLDDPACRDQLRIYAQENKHCDPQRVAQVQDMGKYSNRLALDYFVYSVCEECCDCIPRGASANQYQQRLEQGTLGNAYRGNCPAHAHYDICRVFPNIKYTMKAGVEDDTHEDWPKICWHIGKWIFSRDGRNWLYKSNVNMDWRIARFLENFWDDVGCWRQTIWTECTGLEGDQGRL 246          
BLAST of Gcaud9338.t1 vs. uniprot
Match: A0A2V3IMM0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMM0_9FLOR)

HSP 1 Score: 193 bits (491), Expect = 3.350e-59
Identity = 88/199 (44.22%), Postives = 121/199 (60.80%), Query Frame = 0
Query:    1 MCSACKLKPFNPFTGHFYDCAAIYDLDDPACQAKLKHYAAMNKHCDPIRLKQVQNFNDPWN-KKGLDYFVYSVCEECCDCVPIGARVEQHNWRANNNQLLNSKRGNCPAHAFYDVCAVLPNIRFSKNPGGEDHWDWPKICPLITKWQFSPASKNWLTKSYVNMDWKINRFLVWFFWDNSCGYVNTWKNCVALEHAQKRV 198
            +CSACKLKP  P  GHF DC +I+DL+  +C+A+LK Y  +NKHCDP+R +QV         ++GLDYF+YS+CE+CCDC+P G  + Q+ +R +  +L N+ RGNCPAHA YDVC V P IR   + G       P +CP +  W  +P + NWL ++ V     +  FL  F     C     W++CV LE  QKR+
Sbjct:   18 LCSACKLKPILP-GGHFEDCTSIFDLESQSCRAELKEYVRLNKHCDPVRAEQVPKMMSSGGARQGLDYFIYSICEQCCDCIPRGTHISQYGFRESIGKLFNAGRGNCPAHAVYDVCKVWPKIRGVVSAGESRKVSAPMVCPHLKTWLRNPDNANWLHRNQVKYHPAVGNFLNSFIDAAGCSARPFWESCVRLETKQKRL 215          
BLAST of Gcaud9338.t1 vs. uniprot
Match: R7QF16_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF16_CHOCR)

HSP 1 Score: 192 bits (488), Expect = 2.480e-58
Identity = 92/200 (46.00%), Postives = 124/200 (62.00%), Query Frame = 0
Query:    1 MCSACKLKPFNPFTGHFYDCAAIYDLDDPACQAKLKHYAAMNKHCDPIRLKQVQNFNDPWNKKGLDYFVYSVCEECCDCVPIGARVEQHNWR--ANNNQLLNSKRGNCPAHAFYDVCAVLPNIRFSKNPGGEDHWDWPKICPLITKWQFSPASKNWLTKSYVNMDWKINRFLVWFFWDNSCGYVNTWKNCVALEHAQKRV 198
            MC  C+L  ++   G+F DC AIY + +PAC+++++ Y+ +N  CD +R KQ+++F+DP N+K LDYFVYSVCEECCDC+P GAR  Q+  R  A    L +  RGNCPAHA YD+C V P IR    PGG      PK CP I +W FSPASK W  +   ++   +  FL  F     C   +TW+ C  LE AQ+R+
Sbjct:   49 MCDNCELSAYDS-RGNFNDCQAIYKIGEPACRSQIERYSELNP-CDTVRKKQLEDFDDPDNRKALDYFVYSVCEECCDCIPRGARSSQYEERKRARPRTLTSLVRGNCPAHAHYDICRVWPEIRHVTRPGGTLRLGRPKACPKIREWFFSPASKGWAGQDNTDISRDVRNFLGNFNSVARCRRKSTWQRCTDLEVAQRRI 246          
BLAST of Gcaud9338.t1 vs. uniprot
Match: A0A2V3ID26_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID26_9FLOR)

HSP 1 Score: 169 bits (428), Expect = 1.680e-49
Identity = 87/198 (43.94%), Postives = 109/198 (55.05%), Query Frame = 0
Query:    1 MCSACKLKPFNPFTGHFYDCAAIYDLDDPACQAKLKHYAAMNKHCDPIRLKQVQNFNDPWNKKGLDYFVYSVCEECCDCVPIGARVEQHNWRANNNQLLNSKRGNCPAHAFYDVCAVLPNIRFSKNPGGEDHWDWPKICPLITKWQFSPASKNWLTKSYVNMDWKINRFLVWFFWDNSCGYVNTWKNCVALEHAQKRV 198
            +CS C L+      G F DC +IY+LD P C+AKL+ Y  +N  CD  R  QV+ +N P +K  LDYFVYSVCE+CCDC+  GA   Q   R N N+L + +RGNCPAHA YD+C VLPNIR+    G      W   C  +  W  S ASKN+ T     M   I +FL      N CG    W  CV +E  Q  +
Sbjct:   34 LCSKCTLRLVKE-NGGFKDCKSIYNLDAPGCKAKLQRYVDINP-CDGKRASQVKAWN-PTSKMQLDYFVYSVCEQCCDCIYKGATPGQFQRRKNENRLFHPERGNCPAHAVYDICKVLPNIRYMALGGAPFKEGWENTCKDLRMWLRSEASKNFSTNHNAKMSGNIKKFLRSVNVANQCGSETVWTRCVRMERKQMHI 228          
BLAST of Gcaud9338.t1 vs. uniprot
Match: R7QE68_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE68_CHOCR)

HSP 1 Score: 150 bits (379), Expect = 1.040e-42
Identity = 74/180 (41.11%), Postives = 100/180 (55.56%), Query Frame = 0
Query:   23 IYDLDDPACQAKLKHYAAMNKHCDPIRLKQVQNFNDPWNKKGLDYFVYSVCEECCDCVPIGARVEQHNWRANNNQLLNSKRGNCPAHAFYDVCAVLPNIRFSKNPGGEDHWD----WPKICPLITKWQFSPASKNWLTKSYVNMDWKINRFLVWFFWDNSCGYVNTWKNCVALEHAQKRV 198
            IYD  +P C+  L+ YA++N  CD  R + V++F++  N   LDYF+YSVCE+CCDC+P G +  +   R     L+   R NCPAHA YDVC V PNIR  ++P      D    WPKICP+I KW  SP  +N   K  +N    + +FL  +     C     W  C ALE +Q R+
Sbjct:    3 IYDTSNPQCRQALRRYASLNP-CDVQRNRHVRDFSNSQNLIALDYFIYSVCEQCCDCIPRGTKPGEFAKRKAAGTLIKVDRANCPAHARYDVCKVWPNIRHLRSPWERLPRDLNTLWPKICPIIFKWADSPDGQNLYNKDQINQPASMTQFLTRYVKVAFCSKKAFWNECTALEKSQLRI 181          
BLAST of Gcaud9338.t1 vs. uniprot
Match: A0A2V3IEV2_9FLOR (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV2_9FLOR)

HSP 1 Score: 139 bits (351), Expect = 7.550e-35
Identity = 74/204 (36.27%), Postives = 101/204 (49.51%), Query Frame = 0
Query:    2 CSACKLKPFNPFTGHFYDCAAIYDLDDPACQAKLKHYAAMNKHCDPIRLKQVQNFN--DPWNKKGLDYFVYSVCEECCDCVPIGARVEQHN-----WRANNNQLLNSKRGNCPAHAFYDVCAVLPNIRFSKNPGGEDHWDWPKICPLITKWQFSPASKNWLTKSYVNMDWKINRFLVWFFWDNSCGYVNTWKNCVALEHAQKRV 198
            CS C LKP     G F  C  I+ L+ P+CQ  L+ Y  +N++CDP+R + +  +   D      LDYF+YSVCE CCDCVP+G     +          N  L  + RGNCPAHA YD+C VLP+++    PG  D    P  CP +  W  S  S NW T    ++D  +  FL        C   + W+ C  +E  Q  +
Sbjct:  186 CSRCALKPVTS-NGQFARCDDIFQLETPSCQLALEEYVDLNRNCDPVREQALNAWKAGDASAATQLDYFMYSVCELCCDCVPMGITAADYPALKAAHSEQNPTLWAADRGNCPAHAQYDLCNVLPSVQAFVKPGEPDKV-MPPACPPLNAWLNSARSTNWQTNPDASIDGSVRIFLNDALQALECEREDVWRTCFHMEDLQNHI 387          
BLAST of Gcaud9338.t1 vs. uniprot
Match: A0A2V3IVT7_9FLOR (Protein qua-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVT7_9FLOR)

HSP 1 Score: 129 bits (324), Expect = 1.380e-31
Identity = 74/205 (36.10%), Postives = 105/205 (51.22%), Query Frame = 0
Query:    1 MCSACKLKPFNPFTGHFYDCAAIYDLDDPACQAKLKHYAAMNKHCDPIR---LKQVQNFNDPWNKKGLDYFVYSVCEECCDCVPIGARV-------EQHNWRANNNQLLNSKRGNCPAHAFYDVCAVLPNIRFSKNPGGEDHWDWPKICPLITKWQFSPASKNWLTKSYVNMDWKINRFLVWFFWDNSCGYVNTWKNCVALEHAQ 195
            +C  C L+P     G F  C  IYD   PAC + ++ Y   N+ CD  R   L +++   D   +  +DYF+YSVCE+CCDCVP+G +        + H+  A++  L ++ RGNCPAHA YDVC VLP+I         D      ICP + KW  +PA+++W T   V +   I +FL        CG    W +C  +E  Q
Sbjct:   49 LCGLCPLRPTLQ-DGSFDVCDRIYDTTSPACMSAMRTYVNDNE-CDARRREALDRLEKNGDEDARSEIDYFLYSVCEQCCDCVPMGVKQGDFAQLSKAHS--ASSPTLWSATRGNCPAHARYDVCKVLPSIATFT----ADKSKTKPICPSLNKWINTPAAEDWQTNPEVTLAADIEQFLNGMLVATHCGDAQIWNSCQQMEFKQ 245          
BLAST of Gcaud9338.t1 vs. uniprot
Match: R7QFW8_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFW8_CHOCR)

HSP 1 Score: 117 bits (292), Expect = 2.330e-27
Identity = 55/139 (39.57%), Postives = 76/139 (54.68%), Query Frame = 0
Query:   65 LDYFVYSVCEECCDCVPIGARVEQHNWRANNNQ-----LLNSKRGNCPAHAFYDVCAVLPNIRFSKNPGGEDHWDWPKICPLITKWQFSPASKNWLTKSYVNMDWKINRFLVWFFWDNSCGYVNTWKNCVALEHAQKRV 198
            LDYF+YSVCE+CCDC+P+G R   ++  A+ +      L    RGNCPAHA +DVC VLPN+R+   PG  +    PKICP + +WQ SP + +W      N++  + RFL        C     W  C  +E  Q  +
Sbjct:    3 LDYFLYSVCEQCCDCIPMGTRRRDYDALASAHSPADPTLWKEDRGNCPAHAQFDVCKVLPNVRYFAKPGDPELVA-PKICPKLREWQKSPEAADWPVNPETNIESDVRRFLNGILVATDCDNKLIWGRCYEMEDKQSNL 140          
BLAST of Gcaud9338.t1 vs. uniprot
Match: A0A7S3ZCA3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZCA3_9EUKA)

HSP 1 Score: 94.4 bits (233), Expect = 5.970e-19
Identity = 64/199 (32.16%), Postives = 100/199 (50.25%), Query Frame = 0
Query:   15 GHFYDCAAIYDLDDPACQAKLKHYAAMNKHCDPIR---LKQVQNFNDPWNK----KGLDYFVYSVCEECCDCVPIGARVEQHNWRANNNQLLNSKRGNCPAHAFYDVCAVLPNIRF---SKNPGGEDHWDWPKICPLITKWQFSPASKNWLTKSYVNM----DWKINRFLVWFFWDN-SCGYVNTWKNCVALEHAQKRV 198
            G F DCAA++D+    C A+L+ Y   N  CD  R   L  V+N  +  N     +GLD+FVY++CE CCDC+P G        R +++Q  N  RGNC AH  +D C++ PN+ +   +K P          +CP +  ++  P  +N+L + Y +      ++I    +   W+   C  V  ++ C  LE AQ R+
Sbjct:   48 GEFKDCAAMFDVATDGCLAELQKYVDDNV-CDDKRRDFLSIVKNGPNHPNYATAVEGLDFFVYAMCEACCDCIPFGGH------RDDSSQY-NIHRGNCYAHPRFDTCSLFPNLTWIGPNKPPNAAP------VCPALEDFEAGPG-RNFLLQEYQHEFEEPRYRIIPPFLESMWNGLHCSAVGAYQQCFDLECAQNRI 231          
The following BLAST results are available for this feature:
BLAST of Gcaud9338.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3IJW6_9FLOR2.290e-10968.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQT2_9FLOR6.190e-7455.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMM0_9FLOR3.350e-5944.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QF16_CHOCR2.480e-5846.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ID26_9FLOR1.680e-4943.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QE68_CHOCR1.040e-4241.11Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IEV2_9FLOR7.550e-3536.27Desert hedgehog protein A n=1 Tax=Gracilariopsis c... [more]
A0A2V3IVT7_9FLOR1.380e-3136.10Protein qua-1 n=1 Tax=Gracilariopsis chorda TaxID=... [more]
R7QFW8_CHOCR2.330e-2739.57HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A7S3ZCA3_9EUKA5.970e-1932.16Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_199_length_38196_cov_4.525364contigNODE_199_length_38196_cov_4.525364:9322..9918 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9338.t1Gcaud9338.t1Gracilaria caudata M_176_S67 malemRNANODE_199_length_38196_cov_4.525364 9322..9918 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9338.t1 ID=Gcaud9338.t1|Name=Gcaud9338.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=199bp
MCSACKLKPFNPFTGHFYDCAAIYDLDDPACQAKLKHYAAMNKHCDPIRL
KQVQNFNDPWNKKGLDYFVYSVCEECCDCVPIGARVEQHNWRANNNQLLN
SKRGNCPAHAFYDVCAVLPNIRFSKNPGGEDHWDWPKICPLITKWQFSPA
SKNWLTKSYVNMDWKINRFLVWFFWDNSCGYVNTWKNCVALEHAQKRV*
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