Gcaud9337.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9337.t1
Unique NameGcaud9337.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length248
Homology
BLAST of Gcaud9337.t1 vs. uniprot
Match: A0A2V3IMM0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMM0_9FLOR)

HSP 1 Score: 391 bits (1004), Expect = 2.150e-136
Identity = 170/214 (79.44%), Postives = 191/214 (89.25%), Query Frame = 0
Query:   34 LQGVNVTCGVVAIPPGLCSACKLKPIQPGGHFQDCTSIYDVRSDSCRAKLEEYVRLNKHCDPVRAQQVPNIMTSETARQGIDYFMYSICEQCCDCIPRGTHISQYGFRESIDKLFNVARGNCPAHAVYDVCKVWPKVRAVIRPGQSRKIKAPMVCPHLKTWLRNPDNSNWLYRNQVKYHAAVGRFLNSFVDVSECGVRPTWEACVRLETMQRRL 247
            LQG NVTCGVVA+PP LCSACKLKPI PGGHF+DCTSI+D+ S SCRA+L+EYVRLNKHCDPVRA+QVP +M+S  ARQG+DYF+YSICEQCCDCIPRGTHISQYGFRESI KLFN  RGNCPAHAVYDVCKVWPK+R V+  G+SRK+ APMVCPHLKTWLRNPDN+NWL+RNQVKYH AVG FLNSF+D + C  RP WE+CVRLET Q+RL
Sbjct:    2 LQGFNVTCGVVALPPRLCSACKLKPILPGGHFEDCTSIFDLESQSCRAELKEYVRLNKHCDPVRAEQVPKMMSSGGARQGLDYFIYSICEQCCDCIPRGTHISQYGFRESIGKLFNAGRGNCPAHAVYDVCKVWPKIRGVVSAGESRKVSAPMVCPHLKTWLRNPDNANWLHRNQVKYHPAVGNFLNSFIDAAGCSARPFWESCVRLETKQKRL 215          
BLAST of Gcaud9337.t1 vs. uniprot
Match: A0A2V3IJW6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJW6_9FLOR)

HSP 1 Score: 218 bits (556), Expect = 7.320e-68
Identity = 104/239 (43.51%), Postives = 139/239 (58.16%), Query Frame = 0
Query:   10 SALAALSLLIGAVANQNPCHADKTLQGVNVTCGVVAIPPGLCSACKLKPIQPG-GHFQDCTSIYDVRSDSCRAKLEEYVRLNKHCDPVRAQQVPNIMTSETARQGIDYFMYSICEQCCDCIPRGTHISQYGFRESIDKLFNVARGNCPAHAVYDVCKVWPKVRAVIRPGQSRKIKAPMVCPHLKTWLRNPDNSNWLYRNQVKYHAAVGRFLNSFVDVSECGVRPTWEACVRLETMQRRL 247
            +AL A+  L  A +  NPCH +K  QG  VTC  V  P GLC ACKLKP  P  G F DCTSIY++    C+ +L  Y R   HCDPVR +Q  +       R  +DYF+YS+CE+CCDC+P G+  ++YG+R   + L    RGNCPAHA +D+CKV PK+R             PM+CP L  WL + ++ NWL ++ V     + RFL  F   + CG   TW+ CV LE+ Q+R+
Sbjct:    8 AALLAVWQLAHARSGINPCHDNKAKQGAGVTCQKVVFPEGLCRACKLKPFNPNNGQFYDCTSIYNLTDPQCQQELRLYARWQAHCDPVRLRQTADFSNPSNVR-ALDYFVYSVCEECCDCVPIGSKTAEYGWRAPTNNLLASKRGNCPAHAYFDICKVLPKIRFSKNINGQDHWDWPMICPLLTKWLFSKNSQNWLKKSYVYMDWRINRFLVWFFWDNRCGNEVTWKNCVNLESAQKRV 245          
BLAST of Gcaud9337.t1 vs. uniprot
Match: A0A2V3IQT2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQT2_9FLOR)

HSP 1 Score: 216 bits (551), Expect = 4.310e-67
Identity = 107/246 (43.50%), Postives = 142/246 (57.72%), Query Frame = 0
Query:    6 QIMLSALAALSLLIGAVANQ--NPCHADKTLQGVNVTCGVVAIPPGLCSACKLKPIQPGGHFQDCTSIYDVRSDSCRAKLEEYVRLNKHCDPVRAQQVPNIMTSETARQGIDYFMYSICEQCCDCIPRGTHISQYGFRESIDKLFNVARGNCPAHAVYDVCKVWPKVRAVIRPGQSRKIKA--PMVCPHLKTWLRNPDNSNWLYRNQVKYHAAVGRFLNSFVDVSECGVRPTWEACVRLETMQRRL 247
            +++ +AL  LS++  A A    NPCH DK   GV VTC  V IP  +C+ CKLKP  P G F DC SIYD+   +CR +L  Y + NKHCDP R  QV + M   + R  +DYF+YS+CE+CCDCIPRG   +QY  R     L N  RGNCPAHA YD+C+V+P ++  ++ G         P +C H+  W+ + D  NWLY++ V     + RFL +F D   C  +  W  C  LE  Q RL
Sbjct:    2 KVLTTALVLLSVVYLATAKSGVNPCHGDKDKYGVGVTCTGVRIPGEMCNQCKLKPHLPDGQFADCASIYDLDDPACRDQLRIYAQENKHCDPQRVAQVQD-MGKYSNRLALDYFVYSVCEECCDCIPRGASANQYQQRLEQGTLGNAYRGNCPAHAHYDICRVFPNIKYTMKAGVEDDTHEDWPKICWHIGKWIFSRDGRNWLYKSNVNMDWRIARFLENFWDDVGCWRQTIWTECTGLEGDQGRL 246          
BLAST of Gcaud9337.t1 vs. uniprot
Match: R7QF16_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF16_CHOCR)

HSP 1 Score: 212 bits (540), Expect = 1.990e-65
Identity = 95/246 (38.62%), Postives = 146/246 (59.35%), Query Frame = 0
Query:    4 STQIMLSALAALSLLIGAVANQNPCHADKTLQGVNVTCGVVAIPPGLCSACKLKPIQPGGHFQDCTSIYDVRSDSCRAKLEEYVRLNKHCDPVRAQQVPNIMTSETARQGIDYFMYSICEQCCDCIPRGTHISQYGFRESIDK--LFNVARGNCPAHAVYDVCKVWPKVRAVIRPGQSRKIKAPMVCPHLKTWLRNPDNSNWLYRNQVKYHAAVGRFLNSFVDVSECGVRPTWEACVRLETMQRRL 247
            S  + L  LAA+  L  + + +NPCH ++ ++ + V C  + +PPG+C  C+L      G+F DC +IY +   +CR+++E Y  LN  CD VR +Q+ +    +  R+ +DYF+YS+CE+CCDCIPRG   SQY  R+      L ++ RGNCPAHA YD+C+VWP++R V RPG + ++  P  CP ++ W  +P +  W  ++       V  FL +F  V+ C  + TW+ C  LE  QRR+
Sbjct:    3 SVPLALLTLAAVLSLASSKSGKNPCHPNRRVESLGVPCEGIYLPPGMCDNCELSAYDSRGNFNDCQAIYKIGEPACRSQIERYSELNP-CDTVRKKQLEDFDDPDN-RKALDYFVYSVCEECCDCIPRGARSSQYEERKRARPRTLTSLVRGNCPAHAHYDICRVWPEIRHVTRPGGTLRLGRPKACPKIREWFFSPASKGWAGQDNTDISRDVRNFLGNFNSVARCRRKSTWQRCTDLEVAQRRI 246          
BLAST of Gcaud9337.t1 vs. uniprot
Match: A0A2V3ID26_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID26_9FLOR)

HSP 1 Score: 187 bits (476), Expect = 5.270e-56
Identity = 92/229 (40.17%), Postives = 132/229 (57.64%), Query Frame = 0
Query:   19 IGAVANQNPCHADKTLQGVNVTCGVVAIPPGLCSACKLKPIQPGGHFQDCTSIYDVRSDSCRAKLEEYVRLNKHCDPVRAQQVPNIMTSETARQGIDYFMYSICEQCCDCIPRGTHISQYGFRESIDKLFNVARGNCPAHAVYDVCKVWPKVRAVIRPGQSRKIKAPMVCPHLKTWLRNPDNSNWLYRNQVKYHAAVGRFLNSFVDVSECGVRPTWEACVRLETMQRRL 247
            I A+    PCH DK  Q +N  C  V +P  LCS C L+ ++  G F+DC SIY++ +  C+AKL+ YV +N  CD  RA QV     + T++  +DYF+YS+CEQCCDCI +G    Q+  R++ ++LF+  RGNCPAHAVYD+CKV P +R +   G   K      C  L+ WLR+  + N+   +  K    + +FL S    ++CG    W  CVR+E  Q  +
Sbjct:    5 IEAMREDLPCHMDK--QSLNSMCRQVRLPRELCSKCTLRLVKENGGFKDCKSIYNLDAPGCKAKLQRYVDINP-CDGKRASQVK--AWNPTSKMQLDYFVYSVCEQCCDCIYKGATPGQFQRRKNENRLFHPERGNCPAHAVYDICKVLPNIRYMALGGAPFKEGWENTCKDLRMWLRSEASKNFSTNHNAKMSGNIKKFLRSVNVANQCGSETVWTRCVRMERKQMHI 228          
BLAST of Gcaud9337.t1 vs. uniprot
Match: A0A2V3IEV2_9FLOR (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV2_9FLOR)

HSP 1 Score: 195 bits (495), Expect = 3.320e-54
Identity = 90/227 (39.65%), Postives = 121/227 (53.30%), Query Frame = 0
Query:   27 PCHADKTLQGVNVTCGVVAIPPGLCSACKLKPIQPGGHFQDCTSIYDVRSDSCRAKLEEYVRLNKHCDPVRAQQVPNIMTSE-TARQGIDYFMYSICEQCCDCIPRGTHISQY-----GFRESIDKLFNVARGNCPAHAVYDVCKVWPKVRAVIRPGQSRKIKAPMVCPHLKTWLRNPDNSNWLYRNQVKYHAAVGRFLNSFVDVSECGVRPTWEACVRLETMQRRL 247
            PCH  K+ +   VTC  V IPP  CS C LKP+   G F  C  I+ + + SC+  LEEYV LN++CDPVR Q +      + +A   +DYFMYS+CE CCDC+P G   + Y        E    L+   RGNCPAHA YD+C V P V+A ++PG+  K+  P  CP L  WL +  ++NW          +V  FLN  +   EC     W  C  +E +Q  +
Sbjct:  162 PCHPTKSRKQTEVTCSTVRIPPAFCSRCALKPVTSNGQFARCDDIFQLETPSCQLALEEYVDLNRNCDPVREQALNAWKAGDASAATQLDYFMYSVCELCCDCVPMGITAADYPALKAAHSEQNPTLWAADRGNCPAHAQYDLCNVLPSVQAFVKPGEPDKVMPP-ACPPLNAWLNSARSTNWQTNPDASIDGSVRIFLNDALQALECEREDVWRTCFHMEDLQNHI 387          
BLAST of Gcaud9337.t1 vs. uniprot
Match: A0A2V3IVT7_9FLOR (Protein qua-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVT7_9FLOR)

HSP 1 Score: 166 bits (420), Expect = 1.320e-44
Identity = 83/228 (36.40%), Postives = 114/228 (50.00%), Query Frame = 0
Query:   27 PCHADKTLQGVNVTCGVVAIPPGLCSACKLKPIQPGGHFQDCTSIYDVRSDSCRAKLEEYVRLNKHCDPVRAQQVPNIMTS--ETARQGIDYFMYSICEQCCDCIPRGTHISQYG-----FRESIDKLFNVARGNCPAHAVYDVCKVWPKVRAVIRPGQSRKIKAPMVCPHLKTWLRNPDNSNWLYRNQVKYHAAVGRFLNSFVDVSECGVRPTWEACVRLETMQRRL 247
            PCH+ K     +V C  V +PP LC  C L+P    G F  C  IYD  S +C + +  YV  N+ CD  R + +  +  +  E AR  IDYF+YS+CEQCCDC+P G     +         S   L++  RGNCPAHA YDVCKV P +        + K K   +CP L  W+  P   +W    +V   A + +FLN  +  + CG    W +C ++E  Q  L
Sbjct:   26 PCHSTKASVHNDVKCTSVKLPPRLCGLCPLRPTLQDGSFDVCDRIYDTTSPACMSAMRTYVNDNE-CDARRREALDRLEKNGDEDARSEIDYFLYSVCEQCCDCVPMGVKQGDFAQLSKAHSASSPTLWSATRGNCPAHARYDVCKVLPSIATFT----ADKSKTKPICPSLNKWINTPAAEDWQTNPEVTLAADIEQFLNGMLVATHCGDAQIWNSCQQMEFKQHHL 248          
BLAST of Gcaud9337.t1 vs. uniprot
Match: R7QE68_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE68_CHOCR)

HSP 1 Score: 147 bits (371), Expect = 8.300e-41
Identity = 72/181 (39.78%), Postives = 100/181 (55.25%), Query Frame = 0
Query:   71 IYDVRSDSCRAKLEEYVRLNKHCDPVRAQQVPNIMTSETARQGIDYFMYSICEQCCDCIPRGTHISQYGFRESIDKLFNVARGNCPAHAVYDVCKVWPKVRAVIRPGQS--RKIKA--PMVCPHLKTWLRNPDNSNWLYRNQVKYHAAVGRFLNSFVDVSECGVRPTWEACVRLETMQRRL 247
            IYD  +  CR  L  Y  LN  CD  R + V +   S+     +DYF+YS+CEQCCDCIPRGT   ++  R++   L  V R NCPAHA YDVCKVWP +R +  P +   R +    P +CP +  W  +PD  N   ++Q+   A++ +FL  +V V+ C  +  W  C  LE  Q R+
Sbjct:    3 IYDTSNPQCRQALRRYASLNP-CDVQRNRHVRDFSNSQNLI-ALDYFIYSVCEQCCDCIPRGTKPGEFAKRKAAGTLIKVDRANCPAHARYDVCKVWPNIRHLRSPWERLPRDLNTLWPKICPIIFKWADSPDGQNLYNKDQINQPASMTQFLTRYVKVAFCSKKAFWNECTALEKSQLRI 181          
BLAST of Gcaud9337.t1 vs. uniprot
Match: R7QFW8_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFW8_CHOCR)

HSP 1 Score: 122 bits (307), Expect = 7.680e-29
Identity = 56/139 (40.29%), Postives = 77/139 (55.40%), Query Frame = 0
Query:  114 IDYFMYSICEQCCDCIPRGTHISQYGFRESIDK-----LFNVARGNCPAHAVYDVCKVWPKVRAVIRPGQSRKIKAPMVCPHLKTWLRNPDNSNWLYRNQVKYHAAVGRFLNSFVDVSECGVRPTWEACVRLETMQRRL 247
            +DYF+YS+CEQCCDCIP GT    Y    S        L+   RGNCPAHA +DVCKV P VR   +PG    + AP +CP L+ W ++P+ ++W    +    + V RFLN  +  ++C  +  W  C  +E  Q  L
Sbjct:    3 LDYFLYSVCEQCCDCIPMGTRRRDYDALASAHSPADPTLWKEDRGNCPAHAQFDVCKVLPNVRYFAKPGDPELV-APKICPKLREWQKSPEAADWPVNPETNIESDVRRFLNGILVATDCDNKLIWGRCYEMEDKQSNL 140          
BLAST of Gcaud9337.t1 vs. uniprot
Match: A0A7S3ZCA3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZCA3_9EUKA)

HSP 1 Score: 109 bits (273), Expect = 1.150e-23
Identity = 63/195 (32.31%), Postives = 100/195 (51.28%), Query Frame = 0
Query:   63 GHFQDCTSIYDVRSDSCRAKLEEYVRLNKHCDPVR------AQQVPNIMTSETARQGIDYFMYSICEQCCDCIPRGTHISQYGFRESIDKLFNVARGNCPAHAVYDVCKVWPKVRAVIRPGQSRKIKAPMVCPHLKTWLRNPDNSNWLYRNQVKY----HAAVGRFLNSFVDVSECGVRPTWEACVRLETMQRRL 247
            G F+DC +++DV +D C A+L++YV  N  CD  R       +  PN     TA +G+D+F+Y++CE CCDCIP G H      R+   + +N+ RGNC AH  +D C ++P +  +   G ++   A  VCP L+ +   P  +  L   Q ++    +  +  FL S  +   C     ++ C  LE  Q R+
Sbjct:   48 GEFKDCAAMFDVATDGCLAELQKYVDDNV-CDDKRRDFLSIVKNGPNHPNYATAVEGLDFFVYAMCEACCDCIPFGGH------RDDSSQ-YNIHRGNCYAHPRFDTCSLFPNLTWI---GPNKPPNAAPVCPALEDFEAGPGRNFLLQEYQHEFEEPRYRIIPPFLESMWNGLHCSAVGAYQQCFDLECAQNRI 231          
The following BLAST results are available for this feature:
BLAST of Gcaud9337.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3IMM0_9FLOR2.150e-13679.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IJW6_9FLOR7.320e-6843.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQT2_9FLOR4.310e-6743.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QF16_CHOCR1.990e-6538.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ID26_9FLOR5.270e-5640.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEV2_9FLOR3.320e-5439.65Desert hedgehog protein A n=1 Tax=Gracilariopsis c... [more]
A0A2V3IVT7_9FLOR1.320e-4436.40Protein qua-1 n=1 Tax=Gracilariopsis chorda TaxID=... [more]
R7QE68_CHOCR8.300e-4139.78Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QFW8_CHOCR7.680e-2940.29HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A7S3ZCA3_9EUKA1.150e-2332.31Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..247
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_199_length_38196_cov_4.525364contigNODE_199_length_38196_cov_4.525364:7611..8354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9337.t1Gcaud9337.t1Gracilaria caudata M_176_S67 malemRNANODE_199_length_38196_cov_4.525364 7611..8354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9337.t1 ID=Gcaud9337.t1|Name=Gcaud9337.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=248bp
MRYSTQIMLSALAALSLLIGAVANQNPCHADKTLQGVNVTCGVVAIPPGL
CSACKLKPIQPGGHFQDCTSIYDVRSDSCRAKLEEYVRLNKHCDPVRAQQ
VPNIMTSETARQGIDYFMYSICEQCCDCIPRGTHISQYGFRESIDKLFNV
ARGNCPAHAVYDVCKVWPKVRAVIRPGQSRKIKAPMVCPHLKTWLRNPDN
SNWLYRNQVKYHAAVGRFLNSFVDVSECGVRPTWEACVRLETMQRRL*
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