Gcaud9334.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9334.t1
Unique NameGcaud9334.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length297
Homology
BLAST of Gcaud9334.t1 vs. uniprot
Match: A0A2V3IJT3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJT3_9FLOR)

HSP 1 Score: 385 bits (989), Expect = 4.930e-132
Identity = 214/278 (76.98%), Postives = 241/278 (86.69%), Query Frame = 0
Query:    1 MSVDVLRDTLADREAKLDVVRKKVKHAKERAARPKPKSTISNIQQRYLSAIAEDKEKELPKAQIRSSTNAVSSLASRWNQGIDERKVQKTRVSVRGDVGAAKKNFAHSDVPSMAKADAGRPKDVDHGPAEIVVEDGSDIPSWAKNQRKLVIKKENARSSVHVDVKELKGSVLMNAARDGSEAERTNKVEHVGNVKAALAMWGKTADEDAKVLAKKKEEEEKQRALEEKLRKEREAEELAKAYKEAVEAFAKLNLADMNDEPSKEVELIAFLERKIALV 278
            MSV+ LRD L++REAKLD +R K+K AKERAARPKPKSTIS+IQQRYLSAIAE ++KE+ K QIR+STNAVSSLASRWNQGI+ERKV+KTRVSVRG+V  AKKNF H+D   + K+ A    DVD GPAEI VED S IPSWAKNQ+KLVIKKENARSSV VDVKEL+GSVLMNAARDGSEAERTNKVEHVGNVKAALAMWGKTADEDAKVLAKKKE  E+QR L+EKLRKEREAEE A+  K AVE FA++ L+DM DEPS+E+E+I FLERKI LV
Sbjct:    1 MSVEALRDKLSEREAKLDGLRAKLKAAKERAARPKPKSTISSIQQRYLSAIAESEDKEVHKPQIRASTNAVSSLASRWNQGIEERKVEKTRVSVRGNVSGAKKNFVHNDAHVVGKSVAKLVADVDRGPAEIEVEDDSHIPSWAKNQQKLVIKKENARSSVRVDVKELQGSVLMNAARDGSEAERTNKVEHVGNVKAALAMWGKTADEDAKVLAKKKEXXERQRRLDEKLRKEREAEERARVIKAAVEKFAQMQLSDMTDEPSQELEIIPFLERKITLV 278          
BLAST of Gcaud9334.t1 vs. uniprot
Match: R7QDT3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDT3_CHOCR)

HSP 1 Score: 216 bits (550), Expect = 1.840e-65
Identity = 150/287 (52.26%), Postives = 189/287 (65.85%), Query Frame = 0
Query:    2 SVDVLRDTLADREAKLDVVRKKVKHAKERAARPKPKSTISNIQQRYLSAIAE--DKEKELPKAQIRSSTNAVSSLASRWNQGIDERKVQKTRVSVRGDVGAAKKNFAHSDVPSMAKADAGRPK--DVDHGPAEIVVED-GSDIPSWAKNQRKLVIKKENARSSVH-VDVKELKGSVLMNAARDGSEAERTNKVEHVGNVKAALAMWGKTADEDAKVLAKKKEEEEKQR---ALEEKLRKEREAEELAKAYKEAVEAFAKLNLADMN-DEPSKEVELIAFLERKIALV 278
            SV  LR+ L  RE +L V+R+K++ A++ A+ P  KS IS IQQRY++A+AE   KEKE+PK  + SST  VS+LAS+WNQGI   +V KTRV VRGDV   +KNF  SDVP        + K  +VD GPAE++VED  + +PSWA NQ K VI+KENARSS+  VDVKE++GSVL NAARDGSEA+  + VE  GNVKAALAMWGKTA+ED                  A++         E  AKA   A+E FA L L+ +   EP+KEVEL+A+LERKI LV
Sbjct:    4 SVHALRERLHTREHELKVLREKIEKARQAASSPATKS-ISAIQQRYMAAVAELDKKEKEIPKPIVNSSTAGVSNLASKWNQGISSAQVTKTRVDVRGDVRGTQKNFNASDVPKATSNQPTKTKKSNVDPGPAELLVEDEDAGLPSWAINQSKKVIRKENARSSIRDVDVKEIQGSVLTNAARDGSEAQGES-VEAKGNVKAALAMWGKTAEEDTXXXXXXXXXXXXXXXXXAIKHXXXXXXXXERAAKA---AIERFASLTLSSLPAQEPTKEVELVAYLERKIVLV 285          
BLAST of Gcaud9334.t1 vs. uniprot
Match: A0A2V3IU39_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU39_9FLOR)

HSP 1 Score: 74.3 bits (181), Expect = 1.260e-13
Identity = 46/63 (73.02%), Postives = 55/63 (87.30%), Query Frame = 0
Query:  203 KTADEDAKVLAKKKEEEEKQRALEEKLRKEREAEELAKAYKEAVEAFAKLNLADMNDEPSKEV 265
            KT DEDAK LAKKKEEE +++A +EKL KEREA+E AKAYK AVEAFAK+ LADM++EPSKE+
Sbjct:    6 KTTDEDAKRLAKKKEEE-REKASQEKLGKEREAKERAKAYKRAVEAFAKMKLADMDEEPSKEM 67          
BLAST of Gcaud9334.t1 vs. uniprot
Match: A0A2V3IRH0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRH0_9FLOR)

HSP 1 Score: 72.4 bits (176), Expect = 2.170e-12
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 0
Query:  194 VKAALAMWGKTADEDAKVLAKKKEEEEKQRALEEKLRKEREAEELAKAYKEAVEAFAKLNLADMNDEPS 262
            +K  +    KTADEDAK+LAKK EEEE+++  +EKLRK+ EAEELAKAYK AVEAFA + LADM++EPS
Sbjct:   45 LKHKMGSKSKTADEDAKLLAKK-EEEEREKGSQEKLRKQCEAEELAKAYKRAVEAFANMKLADMDEEPS 112          
The following BLAST results are available for this feature:
BLAST of Gcaud9334.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IJT3_9FLOR4.930e-13276.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QDT3_CHOCR1.840e-6552.26Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IU39_9FLOR1.260e-1373.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IRH0_9FLOR2.170e-1265.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 268..296
NoneNo IPR availableCOILSCoilCoilcoord: 10..30
NoneNo IPR availableCOILSCoilCoilcoord: 212..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_199_length_38196_cov_4.525364contigNODE_199_length_38196_cov_4.525364:128..1018 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9334.t1Gcaud9334.t1Gracilaria caudata M_176_S67 malemRNANODE_199_length_38196_cov_4.525364 128..1018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9334.t1 ID=Gcaud9334.t1|Name=Gcaud9334.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=297bp
MSVDVLRDTLADREAKLDVVRKKVKHAKERAARPKPKSTISNIQQRYLSA
IAEDKEKELPKAQIRSSTNAVSSLASRWNQGIDERKVQKTRVSVRGDVGA
AKKNFAHSDVPSMAKADAGRPKDVDHGPAEIVVEDGSDIPSWAKNQRKLV
IKKENARSSVHVDVKELKGSVLMNAARDGSEAERTNKVEHVGNVKAALAM
WGKTADEDAKVLAKKKEEEEKQRALEEKLRKEREAEELAKAYKEAVEAFA
KLNLADMNDEPSKEVELIAFLERKIALVEQEIKKLEDELAELEAAE*
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