Gcaud9329.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9329.t1
Unique NameGcaud9329.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length241
Homology
BLAST of Gcaud9329.t1 vs. uniprot
Match: A0A2V3IRZ3_9FLOR (Putative plastid-lipid-associated protein 7, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ3_9FLOR)

HSP 1 Score: 255 bits (651), Expect = 2.220e-82
Identity = 135/236 (57.20%), Postives = 165/236 (69.92%), Query Frame = 0
Query:    2 FILPFSGSQNNATLKQDSIIESSRCKLYQRSFRSKGVVRCSAAATGVANLRQEIESIAGRERGIFGLQEEERNRLESLITDLERNNPNPCPTSNDAEAAHGSWRLLYTTLQILGKKRVRLAISSPRKPGLVKLGSFFQLIDSSKRESKNVIEFKVLTGTSGTFTITAKYDVVSPKRVNVSTVATALEPSSFEALLGSNMQLLTQIFNPDGYLDITYLDDSFRIGRDNKGHVFVLER 237
            FI PF     N +L +  + +         + R + V+ CSA    VA+L+ +I SIAG +RGIFGL  ++R  L+SLI  LER  P   PT++DA  A G WRLLYTTL+ILGK R+RLAI S RK GLVKLG FFQLID   R+S+N+IEFKVLTGT GTFTI+A Y VV PKRV V    +AL+P + EALLG N+ LLT IFNPDG+LDITY+DD  RIGRD+KG VFVLE+
Sbjct:    6 FITPFHQIACNPSLPRADLFKHPERFQRLSTPRCRRVILCSATTANVAHLKSQIASIAGEDRGIFGLDGDDRVELDSLIQALERQTPCSNPTADDARVAAGRWRLLYTTLEILGKNRIRLAIGSSRKSGLVKLGDFFQLIDPDNRQSRNLIEFKVLTGTRGTFTISATYSVVGPKRVRVYMTDSALQPQALEALLGENISLLTNIFNPDGFLDITYVDDELRIGRDDKGKVFVLEK 241          
BLAST of Gcaud9329.t1 vs. uniprot
Match: R7Q7V7_CHOCR (PAP_fibrillin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7V7_CHOCR)

HSP 1 Score: 241 bits (614), Expect = 7.710e-77
Identity = 123/232 (53.02%), Postives = 164/232 (70.69%), Query Frame = 0
Query:   15 LKQDSIIESSRCKLYQRSF-RSKGVVR------CSAAATGVANLRQEIESIAGRERGIFGLQEEERNRLESLITDLERNNPNPCPTSNDAEAAHGSWRLLYTTLQILGKKRVRLAISSPRKPGLVKLGSFFQLIDSSKRESKNVIEFKVLTGTSGTFTITAKYDVVSPKRVNVSTVATALEPSSFEALLGSNMQLLTQIFNPDGYLDITYLDDSFRIGRDNKGHVFVLERAE 239
            L +      +R +L  R+  R  GV+R      CSA     A L+ EIE++AG +RGIFG+++++R   E LI  +E  NP   PT+N+A AA G WRLLYT L+ILG++RV+LAI++ RKPG VKLG FFQ++D + R SKNV+EF++LTG +GTFT+ A+Y+ +S  RV V T    LEP + E LLG N  LLTQIFNP+G+LDIT++D+S RIGRDNKGHVFVLE+ E
Sbjct:    7 LSRPVFASDTRSQLKSRALCRQVGVMRRARTPRCSAMTAEKARLKLEIENVAGEQRGIFGMEDDQREAFERLIQAVEAINPVTEPTANNAAAAGGKWRLLYTNLEILGRRRVKLAIATERKPGFVKLGDFFQVVDPATRVSKNVVEFRILTGGTGTFTVCAEYEAISKTRVEVRTTGAGLEPKALEELLGENKTLLTQIFNPEGFLDITFVDESMRIGRDNKGHVFVLEKCE 238          
BLAST of Gcaud9329.t1 vs. uniprot
Match: A0A7S0G4C6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G4C6_9RHOD)

HSP 1 Score: 181 bits (460), Expect = 1.210e-53
Identity = 96/210 (45.71%), Postives = 143/210 (68.10%), Query Frame = 0
Query:   34 RSKGVVRCSAAATGVAN-----LRQEIESIAGRERGIFGLQEEERNRLESLITDLERNNPNPCPTSNDAEAAHGSWRLLYTTLQILGKKRVRLAISSPRKPGLVKLGSFFQLIDSSKRESKNVIEFKVLTGTSGTFTITAKYDVVSPKRVNVSTVATALEPSSFEALLGSNMQLLTQIFNPDGYLDITYLDDSFRIGRDNKGHVFVLERA 238
            R + ++R SA   G+       L + + ++AG +RGIFG++ E+R+R+  L+ ++ER  P+  PTS       G WR+LYT+L ILG +R +LA+S+ +KPGLV+LG  +Q I    + + N +EF V+  T GTFT+TA Y+V S  RV V+   + L P+  E LLG+N+ LLT+IFNP+G+LDIT++DD+ RIGRD+K ++FVLERA
Sbjct:   24 RRRCIMRGSADDHGLREQVKKQLIERVHTLAGPDRGIFGMEGEDRDRVHELLAEVERMTPHLEPTSVIDSVVAGDWRVLYTSLTILGARRTKLALSTSKKPGLVELGDIYQSIQPESKVATNKVEFSVMKVT-GTFTVTATYEVESDTRVGVTFQNSELMPAMLEKLLGNNLGLLTEIFNPEGHLDITFVDDTLRIGRDHKDNIFVLERA 232          
BLAST of Gcaud9329.t1 vs. uniprot
Match: A0A1X6NVB6_PORUM (PAP_fibrillin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVB6_PORUM)

HSP 1 Score: 166 bits (419), Expect = 4.780e-47
Identity = 89/203 (43.84%), Postives = 129/203 (63.55%), Query Frame = 0
Query:   40 RCSAAATGVANLRQEIESIA--GRERGIFGLQEEERNRLESLITDLERNNPNPCPTSNDAEAAHGSWRLLYTTLQILGKKRVRLAISSPRKPGLVKLGSFFQLIDSSKRESKNVIEFKVLTGTSGTFTITAKYDVVSPKRVNVSTVATALEPSSFEALLGSNMQLLTQIFNPDGYLDITYLDDSFRIGRDNKGHVFVLERAEA 240
            RCS A   VA     +++IA  G +RGIFG++   R+R+++L   LE   P   P  + +    G WRLLYTTL ILG++R +L++S+  K G V LG  +Q +  +   +++V++F+VL    G F+ITA Y  +S  RV V+   + LEP     +LG N+ LLTQIF+P G+LDITYLDD++R+GRD KG +FVLE+  A
Sbjct:   53 RCSLAIP-VAERAALLDAIAAVGPDRGIFGVESATRSRIDALAAALEAATPTAAPVEHLSGLVDGRWRLLYTTLTILGRRRSQLSLSTAAKSGFVTLGELYQNVAVADAVAESVVQFRVLGRVEGAFSITATYTPLSGTRVGVAATGSTLEPPGLAKMLGDNVGLLTQIFDPTGWLDITYLDDAYRLGRDGKGRLFVLEKVAA 254          
BLAST of Gcaud9329.t1 vs. uniprot
Match: A0A2K3DY88_CHLRE (PAP_fibrillin domain-containing protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DY88_CHLRE)

HSP 1 Score: 158 bits (399), Expect = 2.730e-44
Identity = 88/213 (41.31%), Postives = 137/213 (64.32%), Query Frame = 0
Query:   34 RSKGVVRCSAAATGVANLRQEIES-IAGRERGIFGLQEEERNRLESLITDLERNNPNPCPTSNDAEAAHGSWRLLYTTLQILGKKRVRLAISSPRKPGLVKLGSFFQLIDSSKRESKNVIEFKV--LTGTSGTFTITAKYDVVSPKRVNVSTVATALEPSSFEALLGSNMQLLTQIFNPDGYLDITYLDD------SFRIGRDNKGHVFVLER 237
            +S  V   S  ++G  +++Q++ + + G +RGIFG+   ++ R+ +LI++LE++N  P PTS D +   G WRL+Y+T+ I G KR +L +        VKLG F Q ID++ R + N IEF V  L+   G+ TI A Y V SP+RV++S + +AL P+  + +  +N+ LL  IFNP+G+LDITYLD       ++R+GRDNKG+VF+L+R
Sbjct:   39 KSGQVALASPVSSGAQDIKQQLTTELEGLDRGIFGVPAAKKARILALISELEQHNAQPAPTS-DLDLVQGDWRLMYSTITITGAKRTKLGLRE-----FVKLGEFTQHIDTANRLAVNRIEFSVSGLSSLRGSLTIRANYSVASPQRVDISYLDSALTPAQLQKIFEANLDLLLSIFNPEGHLDITYLDPQPAAPGAWRVGRDNKGNVFLLQR 245          
BLAST of Gcaud9329.t1 vs. uniprot
Match: A9SG21_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SG21_PHYPA)

HSP 1 Score: 149 bits (376), Expect = 1.080e-41
Identity = 82/181 (45.30%), Postives = 112/181 (61.88%), Query Frame = 0
Query:   59 AGRERGIFGLQEEERNRLESLITDLERNNPNPCPTSNDAEAAHGSWRLLYTTLQILGKKRVRLAISSPRKPGLVKLGSFFQLIDSSKRESKNVIEFKV--LTGTSGTFTITAKYDVVSPKRVNVSTVATALEPSSFEALLGSNMQLLTQIFNPDGYLDITYLDDSFRIGRDNKGHVFVLER 237
            AG  RGIFG+Q   +  + SL+  LE  NP+P PT N  +   G W+LLY+T+ ILG KR +L +        + LG F Q+ID  + ++ N + F V  L   SG+FTI A Y +VSP RV++    + L P    +L   N  LL  IFNP+G+L+ITY+DDS RIGRD+KG+VF+LER
Sbjct:    3 AGLNRGIFGVQNARKVEIASLLQLLEAANPDPRPTDN-LDKVKGDWKLLYSTISILGSKRTKLGLRD-----FINLGDFVQIIDVDQEKAVNRVTFSVAGLGMLSGSFTIEASYKIVSPTRVDIKFQNSTLVPDQLLSLFQKNYDLLLSIFNPEGWLEITYIDDSLRIGRDDKGNVFLLER 177          
BLAST of Gcaud9329.t1 vs. uniprot
Match: A0A1Y1IVH1_KLENI (PAP_fibrillin domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVH1_KLENI)

HSP 1 Score: 150 bits (380), Expect = 2.580e-41
Identity = 90/220 (40.91%), Postives = 133/220 (60.45%), Query Frame = 0
Query:   25 RCKLYQRSFRSKGVVRCSAAATGVANL---RQEI-ESIAGRERGIFGLQEEERNRLESLITDLERNNPNPCPTSNDAEAAHGSWRLLYTTLQILGKKRVRLAISSPRKPGLVKLGSFFQLIDSSKRESKNVIEFKVLTGT---SGTFTITAKYDVVSPKRVNVSTVATALEPSSFEALLGSNMQLLTQIFNPDGYLDITYLDDSFRIGRDNKGHVFVLER 237
            RC +  R+  S  V    +A T V +L   ++E+ E++ G + GIFG+   +++ +E LI +LE +NP   PT N  E   G W LLY+T++ILG KR +L +        VKLG+F Q+ID  + ++ NVI+F+V TG    +G+FTI A +  VSP RV +  + + L P     L   N  LL  +FNP+G+LDIT+ D+  R+GRD+KG+VFVL R
Sbjct:   49 RCLVAPRAAPSSEV----SAGTSVRSLEVIKEELMEAVKGTDMGIFGVPSGKKDHIERLIAELEEHNPTDSPTEN-LEKVAGEWTLLYSTIKILGSKRTKLGLRE-----FVKLGNFRQIIDVDQSQASNVIDFRV-TGLGLLTGSFTIDASFKPVSPTRVEIKFLKSVLVPEQLLLLFQKNYDLLLSVFNPEGWLDITFSDEQLRVGRDDKGNVFVLRR 257          
BLAST of Gcaud9329.t1 vs. uniprot
Match: A0A833RNT7_9POAL (Structural molecule n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833RNT7_9POAL)

HSP 1 Score: 150 bits (378), Expect = 3.610e-41
Identity = 74/186 (39.78%), Postives = 120/186 (64.52%), Query Frame = 0
Query:   56 ESIAGRERGIFGLQEEERNRLESLITDLERNNPNPCPTSNDAEAAHGSWRLLYTTLQILGKKRVRLAISSPRKPGLVKLGSFFQLIDSSKRESKNVIEFKV--LTGTSGTFTITAKYDVVSPKRVNVSTVATALEPSSFEALLGSNMQLLTQIFNPDGYLDITYLDDSFRIGRDNKGHVFVLERAE 239
            +++ G +RGIFG++  +++ +E L+  LE  NP P PT+   +   G W+L+Y+T+ ILG KR +L +      G + LG FFQ+I+ S+ ++ NVI+F     +  SG   I A Y + S  RV+++  ++++ P     L   N  LL +IFNP+G+L+ITY+D+S RIGRD+KG++FVLER++
Sbjct:   62 QALEGVDRGIFGIKSAKKSEIEGLVEMLESQNPTPEPTTQLQDKVDGGWKLVYSTITILGSKRTKLGLR-----GFIDLGDFFQIINVSEEKAVNVIKFNARGFSMLSGQLKIVASYKISSKSRVDITLESSSITPDQLMGLFEKNYDLLLKIFNPEGWLEITYVDESLRIGRDDKGNIFVLERSD 242          
BLAST of Gcaud9329.t1 vs. uniprot
Match: A0A2K1KUA0_PHYPA (PAP_fibrillin domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KUA0_PHYPA)

HSP 1 Score: 151 bits (381), Expect = 4.680e-41
Identity = 83/185 (44.86%), Postives = 114/185 (61.62%), Query Frame = 0
Query:   55 IESIAGRERGIFGLQEEERNRLESLITDLERNNPNPCPTSNDAEAAHGSWRLLYTTLQILGKKRVRLAISSPRKPGLVKLGSFFQLIDSSKRESKNVIEFKV--LTGTSGTFTITAKYDVVSPKRVNVSTVATALEPSSFEALLGSNMQLLTQIFNPDGYLDITYLDDSFRIGRDNKGHVFVLER 237
            I S+ G  RGIFG+Q   +  + SL+  LE  NP+P PT N  +   G W+LLY+T+ ILG KR +L +        + LG F Q+ID  + ++ N + F V  L   SG+FTI A Y +VSP RV++    + L P    +L   N  LL  IFNP+G+L+ITY+DDS RIGRD+KG+VF+LER
Sbjct:  114 INSLEGLNRGIFGVQNARKVEIASLLQLLEAANPDPRPTDN-LDKVKGDWKLLYSTISILGSKRTKLGLRD-----FINLGDFVQIIDVDQEKAVNRVTFSVAGLGMLSGSFTIEASYKIVSPTRVDIKFQNSTLVPDQLLSLFQKNYDLLLSIFNPEGWLEITYIDDSLRIGRDDKGNVFLLER 292          
BLAST of Gcaud9329.t1 vs. uniprot
Match: A0A835UN73_VANPL (PAP_fibrillin domain-containing protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835UN73_VANPL)

HSP 1 Score: 150 bits (380), Expect = 4.730e-41
Identity = 76/185 (41.08%), Postives = 114/185 (61.62%), Query Frame = 0
Query:   57 SIAGRERGIFGLQEEERNRLESLITDLERNNPNPCPTSNDAEAAHGSWRLLYTTLQILGKKRVRLAISSPRKPGLVKLGSFFQLIDSSKRESKNVIEF--KVLTGTSGTFTITAKYDVVSPKRVNVSTVATALEPSSFEALLGSNMQLLTQIFNPDGYLDITYLDDSFRIGRDNKGHVFVLERAE 239
            ++ G  RG+FG++  E+  +E L+  LE  NP P PT +  +  HG W+L+Y+T+ ILG KR +L +        + LG  +Q+ID  K ++KNVI F  K +   +G   I A Y + S  RVN+    +++ P+ F  L   N  LL  IFNP+G+L+ITY+D+  RIGRD+KG++FV+ERAE
Sbjct:   95 ALQGSFRGVFGVKSAEKLEIEELVMKLESRNPTPNPTDHLMDKVHGCWKLIYSTVVILGSKRTKLGLRD-----FINLGDIYQIIDVEKAKAKNVINFNAKGIKSLTGQLIIEALYRIASKTRVNIELENSSITPAQFMCLFQKNYDLLIAIFNPEGWLEITYVDEFMRIGRDDKGNIFVMERAE 274          
The following BLAST results are available for this feature:
BLAST of Gcaud9329.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRZ3_9FLOR2.220e-8257.20Putative plastid-lipid-associated protein 7, chlor... [more]
R7Q7V7_CHOCR7.710e-7753.02PAP_fibrillin domain-containing protein n=1 Tax=Ch... [more]
A0A7S0G4C6_9RHOD1.210e-5345.71Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NVB6_PORUM4.780e-4743.84PAP_fibrillin domain-containing protein n=1 Tax=Po... [more]
A0A2K3DY88_CHLRE2.730e-4441.31PAP_fibrillin domain-containing protein n=4 Tax=Ch... [more]
A9SG21_PHYPA1.080e-4145.30Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A1Y1IVH1_KLENI2.580e-4140.91PAP_fibrillin domain-containing protein n=1 Tax=Kl... [more]
A0A833RNT7_9POAL3.610e-4139.78Structural molecule n=1 Tax=Carex littledalei TaxI... [more]
A0A2K1KUA0_PHYPA4.680e-4144.86PAP_fibrillin domain-containing protein n=1 Tax=Ph... [more]
A0A835UN73_VANPL4.730e-4141.08PAP_fibrillin domain-containing protein n=2 Tax=Va... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..86
NoneNo IPR availablePANTHERPTHR31906:SF4FIBRILLIN-5, CHLOROPLASTICcoord: 48..239
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 55..235
e-value: 1.8E-30
score: 106.4
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 48..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_989_length_15443_cov_4.322564contigNODE_989_length_15443_cov_4.322564:6907..7629 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9329.t1Gcaud9329.t1Gracilaria caudata M_176_S67 malemRNANODE_989_length_15443_cov_4.322564 6907..7629 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9329.t1 ID=Gcaud9329.t1|Name=Gcaud9329.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=241bp
MFILPFSGSQNNATLKQDSIIESSRCKLYQRSFRSKGVVRCSAAATGVAN
LRQEIESIAGRERGIFGLQEEERNRLESLITDLERNNPNPCPTSNDAEAA
HGSWRLLYTTLQILGKKRVRLAISSPRKPGLVKLGSFFQLIDSSKRESKN
VIEFKVLTGTSGTFTITAKYDVVSPKRVNVSTVATALEPSSFEALLGSNM
QLLTQIFNPDGYLDITYLDDSFRIGRDNKGHVFVLERAEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom
IPR039633PAP