Gcaud9323.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9323.t1
Unique NameGcaud9323.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length393
Homology
BLAST of Gcaud9323.t1 vs. uniprot
Match: A0A2V3J0F7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0F7_9FLOR)

HSP 1 Score: 365 bits (936), Expect = 4.040e-110
Identity = 230/402 (57.21%), Postives = 274/402 (68.16%), Query Frame = 0
Query:    2 EETLPGTSEFEQRISMFG-GRRGSQRISSGQETGEENSFHDNRSVARPNIE-SASSGNQGREHGLILQGTGYETVTKEMKEQYNFLQEAYLERDAGDVPNPPAESELEGS----ERMLSMSSTPTAAPSPYETDMQGQLVTDSDSGNVSYQQSPMLAPSESLSGASGDIRHNHVLRRVRNGDIHDDSVLDDYQHNESSVRESARQGQGHGTMELRSDLSNDGPWPWWWSDQKDQKGI---FEESPGRLEPEVF--DKENSSLPSNNQSPVEQSSSGLSTEDAKAAVVVDDTAILKPSEIAKLGHLPTVGSKWQRQYSSTSDGTSRERFENNPYFDELRKRREPYVKTVANRLSTGVKAYSTESGESILEQARKEFEEQHSQQPSVRFNDNDPSSWVTQGVEV 392
            E TL  TS+ +QRIS F    +G+  I  G  T EE S +D+ S ARPN   S SSG QGR    ++  TGYETV KE +++Y  L      R+ G+V      S    +    E  LS+SSTP+AAPSPYET M+ QLV DSDSGN  YQ+SP+LAPSES+SGAS +       +R         SVLDD+++NESS R S+RQG G  T +L+S+LSNDGPWPWWWSDQKDQ  I   F  S      E    DKENSSLPSN+QSPVE+SSS LSTEDAKAAV+V+D  ILKPSEIA+ GHLPT  S WQRQYSSTSDGTS E  ENNPYFDELR+RREPYVKTVANRLSTGV  ++ +SGES+LE+AR+EFE++H  + S  F     SSW TQGV V
Sbjct: 1893 ETTL--TSDVQQRISQFNQDSQGASSIQPGPVT-EEYSLNDHHSTARPNTHVSESSGKQGRNFSGVMYRTGYETVDKETRKEYAAL------RETGNVVENTRRSRRSSAHEYPEGTLSISSTPSAAPSPYETGMKEQLVMDSDSGNA-YQRSPVLAPSESISGASVEFGDRRSQQRT----AATASVLDDFRYNESSHRVSSRQGAG--TPDLQSELSNDGPWPWWWSDQKDQTKISTGFRPSDMDYYGESIQMDKENSSLPSNSQSPVEKSSSALSTEDAKAAVIVNDPMILKPSEIARRGHLPTSRSTWQRQYSSTSDGTSYEH-ENNPYFDELRRRREPYVKTVANRLSTGVNTFTRQSGESMLEEARQEFEKEHEARKSSGFGTG-ASSWTTQGVYV 2276          
BLAST of Gcaud9323.t1 vs. uniprot
Match: R7QMS5_CHOCR (Malectin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMS5_CHOCR)

HSP 1 Score: 59.7 bits (143), Expect = 7.080e-6
Identity = 90/363 (24.79%), Postives = 147/363 (40.50%), Query Frame = 0
Query:   38 SFHDNRSVARPNIESASSGNQGREHGLILQGTGYETVTKEMKEQYNFLQEAYLERDAGDVPNPPAESELEGSERMLSMSSTPTAAPSPYETDMQGQLVTDSDSGNVSYQQSPMLAPSESLSGASGDIRHNHVLRRVRNGDIHDDSVLDDYQHNESSVRESARQGQGHGTMELRSDLSNDGPWPWWWSDQKDQKGIFEESPGRLEPEVFDKENSSLPSNNQSPVEQSSSGLSTEDAKAAVVVDDTAILKPSEI--AKLGHLPTV----------------------------GSKWQRQYSSTSDGTSRERFENNPYFDELRKRREPYVKTVANRLSTGVKAYSTES--GESILEQARKEFEEQ 368
            SF  + S+  P     S+     EH    +G   +   + M   Y   + A  E+D     +       +G    +S++S P A PSPYE++    ++ D    + ++Q              +G  R  ++L     G                        G G      RS +SNDGPWP WWS  K    +  ++P  +   V+++E ++     +   E S  G S E+ K++  V  + + + +E+   + GH P+V                             S W+R      +    E    N  F+ELR+RREPYVK+VA+RLS G ++ ST S   ES  + AR+E+E++
Sbjct: 1603 SFDAHASMVGPTTHPESTRTMTYEHDSATEGA--DDGERSMGG-YGAPERAIAEQDPDIAHSGKGRHSADGG---ISINSNPEAVPSPYESNF---VLQDEAKHSGTFQ--------------AGGERWGNILAPATGG------------------------GAG------RSRVSNDGPWPAWWSRGKH---LARDTPTDV---VYEQEATASAGREEEETEVSDVGESKENEKSSTGVGSSMVQRHAEMFSRREGH-PSVTFETPTRAAPLATSSRPNVMSAASHIAPDSGWRRGSPRKLESID-ENVTVNLEFEELRRRREPYVKSVASRLSVGPQSISTSSMSRESGFD-ARQEYEDE 1903          
The following BLAST results are available for this feature:
BLAST of Gcaud9323.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J0F7_9FLOR4.040e-11057.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QMS5_CHOCR7.080e-624.79Malectin domain-containing protein n=1 Tax=Chondru... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..392

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1448_length_10592_cov_4.938196contigNODE_1448_length_10592_cov_4.938196:9283..10461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9323.t1Gcaud9323.t1Gracilaria caudata M_176_S67 malemRNANODE_1448_length_10592_cov_4.938196 9283..10461 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9323.t1 ID=Gcaud9323.t1|Name=Gcaud9323.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=393bp
MEETLPGTSEFEQRISMFGGRRGSQRISSGQETGEENSFHDNRSVARPNI
ESASSGNQGREHGLILQGTGYETVTKEMKEQYNFLQEAYLERDAGDVPNP
PAESELEGSERMLSMSSTPTAAPSPYETDMQGQLVTDSDSGNVSYQQSPM
LAPSESLSGASGDIRHNHVLRRVRNGDIHDDSVLDDYQHNESSVRESARQ
GQGHGTMELRSDLSNDGPWPWWWSDQKDQKGIFEESPGRLEPEVFDKENS
SLPSNNQSPVEQSSSGLSTEDAKAAVVVDDTAILKPSEIAKLGHLPTVGS
KWQRQYSSTSDGTSRERFENNPYFDELRKRREPYVKTVANRLSTGVKAYS
TESGESILEQARKEFEEQHSQQPSVRFNDNDPSSWVTQGVEV*
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