Gcaud9318.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9318.t1
Unique NameGcaud9318.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length144
Homology
BLAST of Gcaud9318.t1 vs. uniprot
Match: A0A2V3J0E4_9FLOR (40S ribosomal protein S15 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0E4_9FLOR)

HSP 1 Score: 258 bits (660), Expect = 7.530e-87
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
Query:    3 VQPKRRTFKKFTFRGVDLDALLTMKPVELLPLLSSRARRKFNRGITRKPMALIKKLNKAKKEAPEHEKPEVVKTHLRNMIVVPEMIGSVIGVYNGKTFNAVEIKXXXXXXXXXEYSCTYKFVRHGRPGIGATHSSRFIPLK 143
            VQPKRRTFKKFTFRGVDLDALLTMKPVELLPLLSSRARRKFNRGITRKPMALIKKLNKAKKEAPEHEKPEVVKTHLRNMIVVPEMIGSVIGVYNGKTFNAVEIKXXXXXXXXXEYSCTYKFVRHGRPGIGATHSSRFIPLK
Sbjct:    4 VQPKRRTFKKFTFRGVDLDALLTMKPVELLPLLSSRARRKFNRGITRKPMALIKKLNKAKKEAPEHEKPEVVKTHLRNMIVVPEMIGSVIGVYNGKTFNAVEIKXXXXXXXXXEYSCTYKFVRHGRPGIGATHSSRFIPLK 144          
BLAST of Gcaud9318.t1 vs. uniprot
Match: R7QJT8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJT8_CHOCR)

HSP 1 Score: 240 bits (612), Expect = 1.570e-79
Identity = 119/141 (84.40%), Postives = 128/141 (90.78%), Query Frame = 0
Query:    3 VQPKRRTFKKFTFRGVDLDALLTMKPVELLPLLSSRARRKFNRGITRKPMALIKKLNKAKKEAPEHEKPEVVKTHLRNMIVVPEMIGSVIGVYNGKTFNAVEIKXXXXXXXXXEYSCTYKFVRHGRPGIGATHSSRFIPLK 143
            VQ KRRTFKKFTFRGVDLDALLTMKPVE+LPLLSSR RRKFNRG+TRKPMALIKKLNKAK EAPEHEKPEVVKTHLR+MI++PEMIGSV+ VYNGK+FN+VEIK         EYSC+YKFVRHGRPGIGATHSSRFIPLK
Sbjct:    4 VQGKRRTFKKFTFRGVDLDALLTMKPVEILPLLSSRTRRKFNRGLTRKPMALIKKLNKAKMEAPEHEKPEVVKTHLRDMIIIPEMIGSVVAVYNGKSFNSVEIKPEMIGSYLGEYSCSYKFVRHGRPGIGATHSSRFIPLK 144          
BLAST of Gcaud9318.t1 vs. uniprot
Match: I3T4G8_MEDTR (40S ribosomal protein S15-4 n=16 Tax=rosids TaxID=71275 RepID=I3T4G8_MEDTR)

HSP 1 Score: 204 bits (520), Expect = 2.120e-65
Identity = 104/139 (74.82%), Postives = 116/139 (83.45%), Query Frame = 0
Query:    5 PKRRTFKKFTFRGVDLDALLTMKPVELLPLLSSRARRKFNRGITRKPMALIKKLNKAKKEAPEHEKPEVVKTHLRNMIVVPEMIGSVIGVYNGKTFNAVEIKXXXXXXXXXEYSCTYKFVRHGRPGIGATHSSRFIPLK 143
            PK+RTFKKF+FRGVDLDALL M   EL+ L SSRARR+F RG+TRKPMALIKKL KAK+EAP  EKPE V+THLRNMI+VPEMIGS+IGVYNGKTFN VEIK         E+S +YK V+HGRPGIGATHSSRFIPLK
Sbjct:   14 PKKRTFKKFSFRGVDLDALLDMSTDELVKLFSSRARRRFQRGLTRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 152          
BLAST of Gcaud9318.t1 vs. uniprot
Match: I1MQW1_SOYBN (Uncharacterized protein n=5 Tax=Mesangiospermae TaxID=1437183 RepID=I1MQW1_SOYBN)

HSP 1 Score: 204 bits (520), Expect = 2.340e-65
Identity = 103/140 (73.57%), Postives = 117/140 (83.57%), Query Frame = 0
Query:    4 QPKRRTFKKFTFRGVDLDALLTMKPVELLPLLSSRARRKFNRGITRKPMALIKKLNKAKKEAPEHEKPEVVKTHLRNMIVVPEMIGSVIGVYNGKTFNAVEIKXXXXXXXXXEYSCTYKFVRHGRPGIGATHSSRFIPLK 143
            QPK+RTFKKF+FRGVDLDALL M   EL+ + S+RARR+F RG+TRKPMALIKKL KAK+EAP  EKPE V+THLRNMI+VPEMIGS+IGVYNGKTFN VEIK         E+S +YK V+HGRPGIGATHSSRFIPLK
Sbjct:   16 QPKKRTFKKFSFRGVDLDALLDMSTDELVKMFSARARRRFQRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 155          
BLAST of Gcaud9318.t1 vs. uniprot
Match: I1KNN1_SOYBN (Uncharacterized protein n=6 Tax=Phaseoleae TaxID=163735 RepID=I1KNN1_SOYBN)

HSP 1 Score: 204 bits (520), Expect = 2.580e-65
Identity = 103/140 (73.57%), Postives = 117/140 (83.57%), Query Frame = 0
Query:    4 QPKRRTFKKFTFRGVDLDALLTMKPVELLPLLSSRARRKFNRGITRKPMALIKKLNKAKKEAPEHEKPEVVKTHLRNMIVVPEMIGSVIGVYNGKTFNAVEIKXXXXXXXXXEYSCTYKFVRHGRPGIGATHSSRFIPLK 143
            QPK+RTFKKF+FRGVDLDALL M   EL+ + S+RARR+F RG+TRKPMALIKKL KAK+EAP  EKPE V+THLRNMI+VPEMIGS+IGVYNGKTFN VEIK         E+S +YK V+HGRPGIGATHSSRFIPLK
Sbjct:   19 QPKKRTFKKFSFRGVDLDALLDMSTDELVKMFSARARRRFQRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 158          
BLAST of Gcaud9318.t1 vs. uniprot
Match: A0A0A0LLK6_CUCSA (Uncharacterized protein n=3 Tax=Cucumis TaxID=3655 RepID=A0A0A0LLK6_CUCSA)

HSP 1 Score: 204 bits (519), Expect = 3.110e-65
Identity = 103/140 (73.57%), Postives = 117/140 (83.57%), Query Frame = 0
Query:    4 QPKRRTFKKFTFRGVDLDALLTMKPVELLPLLSSRARRKFNRGITRKPMALIKKLNKAKKEAPEHEKPEVVKTHLRNMIVVPEMIGSVIGVYNGKTFNAVEIKXXXXXXXXXEYSCTYKFVRHGRPGIGATHSSRFIPLK 143
            QPK+RTFKKF+FRGVDLDALL M   EL+ L ++RARR+F RG+TRKPMALIKKL KAK+EAP  EKPE V+THLRNMI+VPEMIGS+IGVYNGKTFN VEIK         E+S +YK V+HGRPGIGATHSSRFIPLK
Sbjct:   14 QPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFRRGLTRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153          
BLAST of Gcaud9318.t1 vs. uniprot
Match: A0A7J7HES8_CAMSI (Uncharacterized protein n=6 Tax=Ericales TaxID=41945 RepID=A0A7J7HES8_CAMSI)

HSP 1 Score: 204 bits (519), Expect = 4.610e-65
Identity = 103/140 (73.57%), Postives = 117/140 (83.57%), Query Frame = 0
Query:    4 QPKRRTFKKFTFRGVDLDALLTMKPVELLPLLSSRARRKFNRGITRKPMALIKKLNKAKKEAPEHEKPEVVKTHLRNMIVVPEMIGSVIGVYNGKTFNAVEIKXXXXXXXXXEYSCTYKFVRHGRPGIGATHSSRFIPLK 143
            QPK+RTFKKF+FRGVDLDALL M   EL+ L ++RARR+F RG+ RKPMALIKKL KAK+EAP  EKPE+VKTHLRNMI+VPEMIGSVIGVYNGKTFN +EIK         E+S +YK V+HGRPGIGATHSSRFIPLK
Sbjct:   26 QPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPELVKTHLRNMIIVPEMIGSVIGVYNGKTFNQIEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 165          
BLAST of Gcaud9318.t1 vs. uniprot
Match: V7BJF1_PHAVU (Uncharacterized protein n=6 Tax=Pentapetalae TaxID=1437201 RepID=V7BJF1_PHAVU)

HSP 1 Score: 203 bits (517), Expect = 5.880e-65
Identity = 103/142 (72.54%), Postives = 117/142 (82.39%), Query Frame = 0
Query:    2 QVQPKRRTFKKFTFRGVDLDALLTMKPVELLPLLSSRARRKFNRGITRKPMALIKKLNKAKKEAPEHEKPEVVKTHLRNMIVVPEMIGSVIGVYNGKTFNAVEIKXXXXXXXXXEYSCTYKFVRHGRPGIGATHSSRFIPLK 143
            Q  PK+RTFKKF+FRGVDLDALL M   EL+ L ++RARR+F RG+TRKPMALIKKL KAK+EAP  EKPE V+THLRNMI+VPEMIGS+IGVYNGKTFN VEIK         E+S +YK V+HGRPGIGATHSSRFIPLK
Sbjct:   10 QAVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151          
BLAST of Gcaud9318.t1 vs. uniprot
Match: G7LAJ5_MEDTR (40S ribosomal protein S15-4 n=9 Tax=fabids TaxID=91835 RepID=G7LAJ5_MEDTR)

HSP 1 Score: 203 bits (517), Expect = 6.490e-65
Identity = 103/139 (74.10%), Postives = 116/139 (83.45%), Query Frame = 0
Query:    5 PKRRTFKKFTFRGVDLDALLTMKPVELLPLLSSRARRKFNRGITRKPMALIKKLNKAKKEAPEHEKPEVVKTHLRNMIVVPEMIGSVIGVYNGKTFNAVEIKXXXXXXXXXEYSCTYKFVRHGRPGIGATHSSRFIPLK 143
            PK+RTFKKF+FRGVDLDALL M   EL+ L S+RARR+F RG+TRKPMALIKKL KAK+EAP  EKPE V+THLRNMI+VPEMIGS+IGVYNGKTFN VEIK         E+S +YK V+HGRPGIGATHSSRFIPLK
Sbjct:   16 PKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154          
BLAST of Gcaud9318.t1 vs. uniprot
Match: A0A4D6LA08_VIGUN (Small subunit ribosomal protein S15e n=2 Tax=NPAAA clade TaxID=2231382 RepID=A0A4D6LA08_VIGUN)

HSP 1 Score: 205 bits (522), Expect = 9.790e-65
Identity = 104/140 (74.29%), Postives = 117/140 (83.57%), Query Frame = 0
Query:    4 QPKRRTFKKFTFRGVDLDALLTMKPVELLPLLSSRARRKFNRGITRKPMALIKKLNKAKKEAPEHEKPEVVKTHLRNMIVVPEMIGSVIGVYNGKTFNAVEIKXXXXXXXXXEYSCTYKFVRHGRPGIGATHSSRFIPLK 143
            QPK+RTFKKF+FRGVDLDALL M   EL+ L S+RARR+F RG+TRKPMALIKKL KAK+EAP  EKPE V+THLRNMI+VPEMIGS+IGVYNGKTFN VEIK         E+S +YK V+HGRPGIGATHSSRFIPLK
Sbjct:   82 QPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 221          
The following BLAST results are available for this feature:
BLAST of Gcaud9318.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0E4_9FLOR7.530e-87100.0040S ribosomal protein S15 n=1 Tax=Gracilariopsis c... [more]
R7QJT8_CHOCR1.570e-7984.40Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
I3T4G8_MEDTR2.120e-6574.8240S ribosomal protein S15-4 n=16 Tax=rosids TaxID=... [more]
I1MQW1_SOYBN2.340e-6573.57Uncharacterized protein n=5 Tax=Mesangiospermae Ta... [more]
I1KNN1_SOYBN2.580e-6573.57Uncharacterized protein n=6 Tax=Phaseoleae TaxID=1... [more]
A0A0A0LLK6_CUCSA3.110e-6573.57Uncharacterized protein n=3 Tax=Cucumis TaxID=3655... [more]
A0A7J7HES8_CAMSI4.610e-6573.57Uncharacterized protein n=6 Tax=Ericales TaxID=419... [more]
V7BJF1_PHAVU5.880e-6572.54Uncharacterized protein n=6 Tax=Pentapetalae TaxID... [more]
G7LAJ5_MEDTR6.490e-6574.1040S ribosomal protein S15-4 n=9 Tax=fabids TaxID=9... [more]
A0A4D6LA08_VIGUN9.790e-6574.29Small subunit ribosomal protein S15e n=2 Tax=NPAAA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002222Ribosomal protein S19/S15PRINTSPR00975RIBOSOMALS19coord: 96..108
score: 41.94
coord: 108..123
score: 48.39
coord: 76..95
score: 42.26
IPR002222Ribosomal protein S19/S15PFAMPF00203Ribosomal_S19coord: 41..126
e-value: 1.2E-32
score: 111.6
IPR002222Ribosomal protein S19/S15PIRSFPIRSF002144RPS19p_RPS19a_RPS15e_RPS19ocoord: 1..143
e-value: 7.0E-38
score: 126.8
IPR002222Ribosomal protein S19/S15PANTHERPTHR11880RIBOSOMAL PROTEIN S19P FAMILY MEMBERcoord: 6..143
IPR002222Ribosomal protein S19/S15HAMAPMF_00531Ribosomal_S19coord: 39..132
score: 20.537992
IPR005713Ribosomal protein S19A/S15eTIGRFAMTIGR01025TIGR01025coord: 10..143
e-value: 8.6E-64
score: 211.3
IPR023575Ribosomal protein S19/S15, superfamilyGENE3D3.30.860.1030s Ribosomal Protein S19; Chain Acoord: 1..143
e-value: 8.9E-67
score: 225.1
IPR023575Ribosomal protein S19/S15, superfamilySUPERFAMILY54570Ribosomal protein S19coord: 46..127
NoneNo IPR availablePANTHERPTHR11880:SF41BNAA03G55820D PROTEINcoord: 6..143
IPR020934Ribosomal protein S19 conserved sitePROSITEPS00323RIBOSOMAL_S19coord: 96..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1448_length_10592_cov_4.938196contigNODE_1448_length_10592_cov_4.938196:297..845 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9318.t1Gcaud9318.t1Gracilaria caudata M_176_S67 malemRNANODE_1448_length_10592_cov_4.938196 297..845 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9318.t1 ID=Gcaud9318.t1|Name=Gcaud9318.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=144bp
MQVQPKRRTFKKFTFRGVDLDALLTMKPVELLPLLSSRARRKFNRGITRK
PMALIKKLNKAKKEAPEHEKPEVVKTHLRNMIVVPEMIGSVIGVYNGKTF
NAVEIKPEMIGTYLGEYSCTYKFVRHGRPGIGATHSSRFIPLK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002222Ribosomal_S19
IPR005713Ribosomal_S19A/S15e
IPR023575Ribosomal_S19_S15_SF
IPR020934Ribosomal_S19_CS