Gcaud9305.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9305.t1
Unique NameGcaud9305.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length528
Homology
BLAST of Gcaud9305.t1 vs. uniprot
Match: A0A2V3IP86_9FLOR (Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP86_9FLOR)

HSP 1 Score: 734 bits (1894), Expect = 3.140e-262
Identity = 392/540 (72.59%), Postives = 437/540 (80.93%), Query Frame = 0
Query:    1 MAFVSALPVVPSA---------PCSSFAPARARVARAAGGVGVARRARTSMAVEFQEYSGGLDRLTQAPYSITRYLFKDRPVPLTDEDKEAVINAALRQLFGNAYLMEEERAQFYTAESNFRCGRITAREFARAVAKSETYRQRFFERVTQFRFIELNFKHFLGRAPLNQVEYSKHFKIFAAGGYEAEIDSYFDDPEYDEVFGDDIFPFTRFRGTYAPINQFNRMCTIVGGFAGSDKFKPQALVTSLAANVPTPAYSVVDGLPPIPNSEHPSKKYELPAVSLERFINELDIAQARAYQLQIELDRAYAELDGSRDIIDPFKAMVSDMNITPLYGKNYGNGAVKVFPGQYEGAPVASWGPSGVDRINGPTRRPAAEVSKKEKELERVKQLIVDIERRIAVLSADREKPALTPPPMTFEIEGLEF----PVVEEEPAEAGPVIIEPAFVAATPGATEGEEEIAVDPNLLPTTMDTEKDDSGVTTPQPIVVSTKREFADVGKLPKELMEEMEAEKKASGKDFLAGKGGKPSFPGDGSEMVVGG 527
            MAFVSA PV+PSA         P S+ APA   VA A       R +R +M +EFQ YSGGLD ++Q PY+ITRYLFK  P  L  EDKE+VIN ALR LFGNAYLMEEERAQFYTAESN+RCGRITA++FARAVAKSETYR+RFF  VTQFRFIELNFKHFLGRAPLNQVEYSKHFKIFAAGGY+AEIDSYFDDPEYD VFGDD FPFTRFRGTYAPINQFNRMCT+ GGFA SDKFKPQ LVTSLAAN PTPAY+VVDGLPPIPN+EHPS+KY+LP+VSLERFINEL IA+ARAYQLQIELD AY +L  SRD I PFK+MVSDM+ITPLYGKNYG+GAVKVF GQYEGAP ASWG SGVDR+NGPTRRPA  VSKKEKELERVKQLIVD+ERR+AVL A+RE PALTP P+ FE+EG+E     P V  E  E  PV+I+P  +         EE +  DPNLLP  +D   DDSGV  P+P+VVST R+  +VG++PK L+EEMEAE KASGK FL GK GKPSFPGDGSEM +GG
Sbjct:    1 MAFVSATPVLPSARSPSFLSPFPTSAPAPAPRHVAPA-------RPSRPAMQLEFQTYSGGLDMISQHPYAITRYLFKPAPQVLYAEDKESVINTALRHLFGNAYLMEEERAQFYTAESNYRCGRITAKQFARAVAKSETYRKRFFGNVTQFRFIELNFKHFLGRAPLNQVEYSKHFKIFAAGGYDAEIDSYFDDPEYDLVFGDDYFPFTRFRGTYAPINQFNRMCTLRGGFAASDKFKPQMLVTSLAANTPTPAYTVVDGLPPIPNAEHPSQKYQLPSVSLERFINELAIARARAYQLQIELDAAYEKLSASRDAIQPFKSMVSDMDITPLYGKNYGSGAVKVFTGQYEGAPAASWGASGVDRLNGPTRRPANTVSKKEKELERVKQLIVDLERRVAVLRAERESPALTPTPLRFELEGIELAEQAPQVVPETPE--PVVIQPVEIPV-------EEGLLPDPNLLPDAVDEAADDSGVVVPKPVVVSTSRQLQEVGEVPKVLIEEMEAESKASGKSFLEGKSGKPSFPGDGSEMTIGG 524          
BLAST of Gcaud9305.t1 vs. uniprot
Match: R7QQQ6_CHOCR (PBS-linker domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQQ6_CHOCR)

HSP 1 Score: 572 bits (1473), Expect = 6.700e-199
Identity = 309/491 (62.93%), Postives = 356/491 (72.51%), Query Frame = 0
Query:   42 MAVEFQEYSGGLDRLTQAPYSITRYLFKDRPVPLTDEDKEAVINAALRQLFGNAYLMEEERAQFYTAESNFRCGRITAREFARAVAKSETYRQRFFERVTQFRFIELNFKHFLGRAPLNQVEYSKHFKIFAAGGYEAEIDSYFDDPEYDEVFGDDIFPFTRFRGTYAPINQFNRMCTIVGGFAGSDKFKPQALVTSLAANVPTPAYSVVDGLPPIPNSEHPSKKYELPAVSLERFINELDIAQARAYQLQIELDRAYAELDGSRDIIDPFKAMVSDMNITPLYGKNYGNGAVKVFPGQYEGAPVASWGPSGVDRINGPTRRPAAEVSKKEKELERVKQLIVDIERRIAVLSADREKPALTPPPMTFEIEGLEFPVVEEEPAEAGPVIIEPAFVAATPGATEGEEEIAVDP----NLL-PTTMDTEKDDSGVTTPQPIVVSTKREFADVGKLPKELMEEMEAEKKASGKDFLAGKGGKPSFPGDGSEMVVGG 527
            M VEFQ YSGGLDR++  PY+ITR LF   P  L  E+K+    A LRQLFGNAYLMEEERAQFY AES +RC +ITA+EF RA AKS+TYRQ                    GRAPLNQVEYSKHFKIFAAGG++AEIDSYFDDPEYD+VFG+D+ P+TRFRGTYAPINQFNRMCTI GGFAGSDK KPQ LVTSLAANVPT A+SVVDGLP IPNSEH SKKY+LP  SLERF NEL+IA A+AYQLQIEL+ AY +L G RD  +PFKAM  DMNIT LYG NYG+G V VF G+Y GA   SWGPSGVD INGPTRRPA  + KKEK+LERVKQLIVD+ER+++VL A+REKPALTP      I G     ++ +  E                       I V P    NL+ P  +D E ++SG+  PQ + V TKR+  DVG+LPKELMEE+E EKKASG+DFL GKG + +FPGDGSEMV+GG
Sbjct:    1 MNVEFQTYSGGLDRVSIDPYTITRDLFTPLPQNLNPEEKDVATAAGLRQLFGNAYLMEEERAQFYNAESQYRCDQITAKEFLRAAAKSQTYRQXXXXXXXXXXXXXXXXXXXXGRAPLNQVEYSKHFKIFAAGGFDAEIDSYFDDPEYDDVFGEDVMPYTRFRGTYAPINQFNRMCTIEGGFAGSDKCKPQMLVTSLAANVPTSAFSVVDGLPAIPNSEHQSKKYDLPDASLERFRNELEIAAAKAYQLQIELNEAYEKLSGFRDYANPFKAMAQDMNITQLYGSNYGSGKVSVFAGEYIGAKAGSWGPSGVDNINGPTRRPAVVIGKKEKQLERVKQLIVDLERKVSVLEAEREKPALTP---GVSISGF----MDMQQQEVAXXXXXXXXXXXXXXXXXXXRVIEVQPAEAENLIVPELVDVEDEESGLVKPQSVQVETKRQIKDVGRLPKELMEEIEEEKKASGQDFLEGKGPREAFPGDGSEMVIGG 484          
BLAST of Gcaud9305.t1 vs. uniprot
Match: A0A291FEB8_GRIPA (LRC3 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEB8_GRIPA)

HSP 1 Score: 516 bits (1330), Expect = 8.960e-177
Identity = 296/528 (56.06%), Postives = 357/528 (67.61%), Query Frame = 0
Query:    1 MAFVSALPVVPSAPCSSFAPARARVARAAGGVGVARRARTSMAVEFQEYSGGLDRLTQAPYSITRYLFKDRPVPLTDEDKEAVINAALRQLFGNAYLMEEERAQFYTAESNFRCGRITAREFARAVAKSETYRQRFFERVTQFRFIELNFKHFLGRAPLNQVEYSKHFKIFAAGGYEAEIDSYFDDPEYDEVFGDDIFPFTRFRGTYAPINQFNRMCTIVGGFAGSDKFKPQALVTSLAANVPTPAYSVVDGLPPIPNSEHPSKKYELPAVSLERFINELDIAQARAYQLQIELDRAYAELDGSRDIIDPFKAMVSDMNITPLYGKNYGNGAVKVFPGQYEGAPVASWGPSGVDRINGPTRRPAAEVSKKEKELERVKQLIVDIERRIAVLSADREKPALTPPPMTFEIEGLEFPVVEEEPAEAGPVIIEPAFVAATPGATEGEEEIAVDPNLLPTT-MDTEKDDSGVTTPQPIVVSTKREFADVGKLPKELMEEMEAEKKASGKDFLAGKGGKPSFPGDGSEMVVGG 527
            MAFVSA  V  S   +S    R+  +  A       R    MA+EFQ YSGGLDR++  PYSITRYLFK  P  +TD DK+  INA LRQLFGNAY+MEEERA+FY AES FRCG ITAREFARAVA S  YR                     GRAPLNQVEYSKHFKIFA GGYEAEI+SYFDDPEYDEVFGDD  PFTRFRGTYAPINQFNRMC + GGFA SDK +P  L+TSLAANVP  AY VVDGLP IPN+EHP++K+ELP  SLERF NE+++A+AR  QL++EL  AYA+ D  R     F+AM +DM+I+ L G  +  G V+ +P  ++G   A WG SGVD ++G  +RPA E++KKE +LER+KQL+VD+ERR+AVL A+RE+PALTP P+ FE+EGL   V EEE  E             TPG    E     D   + T  +D E +DSG+  P+ + V T R   DVG LP +LM+E+E + KA GK+F   K G+ SFPGDGSEMV+GG
Sbjct:    1 MAFVSATSVAVSTRATSLT-GRSVSSSNAPPARTPTRPSPCMAIEFQTYSGGLDRVSLEPYSITRYLFKPAPATVTDGDKDVAINAGLRQLFGNAYIMEEERAEFYNAESKFRCGEITAREFARAVALSNAYRSXXXXXXXXXXXXXXXXXXXXGRAPLNQVEYSKHFKIFAEGGYEAEINSYFDDPEYDEVFGDDCMPFTRFRGTYAPINQFNRMCVLEGGFAMSDKQRPVQLMTSLAANVPPAAYRVVDGLPAIPNAEHPTRKFELPNASLERFRNEVEVAKARELQLRVELKEAYAKRDEYRSGFAGFRAMAADMDISMLPGPRF-QGRVENYP-TWDGKS-APWGKSGVDTLSGVEKRPAKEIAKKEFQLERIKQLVVDLERRVAVLEAEREQPALTPEPLMFELEGLPQIVKEEEVVEE----------VTTPGTGVSELSADFDSTTMVTPDIDPESEDSGIVAPKTVEVETSRLAKDVGDLPGKLMKELEEKTKAEGKEFGGPKDGRLSFPGDGSEMVIGG 514          
BLAST of Gcaud9305.t1 vs. uniprot
Match: A0A1X6NJY8_PORUM (PBS-linker domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJY8_PORUM)

HSP 1 Score: 409 bits (1050), Expect = 9.140e-135
Identity = 241/504 (47.82%), Postives = 313/504 (62.10%), Query Frame = 0
Query:   49 YSGGLDRLTQAPYSITRYLFKDRPVPL----TDEDKEAVINAALRQLFGNAYLMEEERAQFYTAESNFRCGRITAREFARAVAKSETYRQRFFERVTQFRFIELNFKHFLGRAPLNQVEYSKHFKIFAAGGYEAEIDSYFDDPEYDEVFGDDIFPFTRFRGTYAPINQFNRMCTIVGGFAGSDKFKPQAL-VTSLAANVPTPAYSVVDGLPPIPNSEHPSKKYELPAVSLERFINELDIAQARAYQLQIELDRAYAELDGSRDIIDPFKAMVSDMNITPLYGKNYGNGAVKVFPGQYE--GAPVASWGPSGVDRINGPTRRPAAEVSKKEKELERVKQLIVDIERRIAVLSADREKPALTPPPMTFEIEGLEFPV------------VEEEPAEAGPVIIEPAFVAATPGATEGEEEIAVDPNLLPTTMDTEKDDSGVTTPQPIVVSTKREFADVGK-LPKELMEEMEAEKKA---SGKDFLAGKGG----KPSFPGDGSEMVV 525
            YSGGLDR++Q PYSI+R LF   P  +    ++E+K+A +  ALRQ+FGNAYLMEEERA+ YT ESNFRCGRI A++F R +AKS TY++RFFE V+  RFIEL  KH LGRA L++ E++ H   +A+ GY+A+IDSY D  EY +VFG+D+ PF RFRGTYAPIN FNR CT+ GG+A SDK  P A  V  L  N PT A+SV DGLPPIPN+EHPS KY LP  SL+R+ NEL++A+A+A +L I L+ +   L  S+  + PFK MV+DM++TPLYGK +GNG V+ F GQY+  G     WG SGV+   G TRR A +V  KEK LE + QLIVD+ER+IA LS++    +L+P     +++ LE  V            V       G  ++ P   AA     E                           P+P+ V T R F D     P +L++E+E EKKA   +GK   +G GG    K +FPGDGSEM V
Sbjct:   11 YSGGLDRVSQQPYSISRSLFMPPPAVIANGSSNEEKDATVVRALRQVFGNAYLMEEERAELYTLESNFRCGRIAAKDFVRGLAKSATYKKRFFENVSHNRFIELAHKHLLGRAVLDKAEFAAHAATYASAGYDADIDSYVDSAEYAQVFGEDVVPFVRFRGTYAPINAFNRQCTLEGGWASSDKSSPLASSVGQLLGNTPTSAFSVADGLPPIPNAEHPSAKYTLPNASLQRYRNELEVAKAKALELSIALEASKNNLKSSQKFLSPFKNMVADMDLTPLYGKPFGNGTVEAFSGQYKAPGGAAGEWGVSGVEASKGRTRRAAGDVGAKEKRLESLSQLIVDLERKIATLSSELTARSLSP---VVDVDPLEAAVAAXXXXXXXXXXVTTSAIRIGQTVVRPVEQAADKAVQESXXXXXX----------------XXXAPKPVKVITSRAFLDESTPTPGQLIKEIEDEKKALEAAGKS--SGFGGPANAKLTFPGDGSEMNV 493          
BLAST of Gcaud9305.t1 vs. uniprot
Match: A0A7S0ZG35_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZG35_9RHOD)

HSP 1 Score: 377 bits (969), Expect = 1.320e-122
Identity = 223/491 (45.42%), Postives = 288/491 (58.66%), Query Frame = 0
Query:   42 MAVEFQEYSGGLDRLTQAPYSITRYLFKDRPVPLTDEDKEAVINAAL----RQLFGNAYLMEEERAQFYTAESNFRCGRITAREFARAVAKSETYRQRFFERVTQFRFIELNFKHFLGRAPLNQVEYSKHFKIFAAGGYEAEIDSYFDDPEYDEVFGDDIFPFTRFRGTYAPINQFNRMCTIVGGFAGSDKFKPQALVTSLAANVPTPAYSVVDGLPPIPNSEHPSKKYELPAVSLERFINELDIAQARAYQLQIELDRAYAELDGSRDIIDPFKAMVSDMNITPLYGKNYGNGAVKVFPGQYEGAPVASWGPSGVDRINGPTRRPAAEVSKKEKELERVKQLIVDIERRIAVLSADREKPALTPPPMTFEIEGLEFPVVEEEPAEAGPVIIEPAFVAATPGATEGEEEIAVDPNLLPTTMDTEKDDSGVTTPQPIVVSTKREFADVGKL-PKELMEEMEAEKKASGKDFLAGKGGKPSFPGDGSEMVVGG 527
            M V F    GGLDRL+ APY  TRYLF+DRP      D E  + +A     R +FGNAYLMEEER +   AES F+ G I  R+F RA+AKS  Y+ RFF+RV+Q+RF ELNF H LGRAPL+Q E S H+ IFA GGYEAEIDSY D  EY +VFG+D  P+ RFRGTY+P + FN  C + GG+A SDK  P   ++ LAA  P PAY +VDGLPPIPNSEHPSKKYE            L  A+++  + Q+EL  AY  L+ SR  + PF  M +DM +  LYG+ +GNGAV VF G+Y G     WG +G +++ G +RR A ++  KE  LE+ KQL+VD+ER + ++ A+ EKP ++P  +   +   E+  VE E     PV++                  AV+P LL           G      I VS  R  AD+  L P+  +E+ E  K    K + A    KP FPGDGSEM +GG
Sbjct:   44 MGVRFDYGGGGLDRLSAAPYGYTRYLFQDRPKSTKVCDSEGEVQSAFTSIYRHVFGNAYLMEEEREELAVAESKFKMGEIGMRDFIRAIAKSNAYKSRFFDRVSQYRFFELNFIHLLGRAPLDQTEISAHYGIFAEGGYEAEIDSYIDSQEYSDVFGEDTAPYMRFRGTYSPNSTFNSQCKLQGGWARSDKNLPVMSMSVLAAKAPVPAYQIVDGLPPIPNSEHPSKKYEXXXXXXXXXXXXLATAKSKVLEFQLELTAAYNMLEDSRKFLSPFMNMAADMQLPQLYGRKFGNGAVNVFSGKYLGTGSGEWGVTGAEKVRGRSRRVAMDIGAKEARLEKTKQLVVDLERAVGLIEAEIEKPPMSPAAL---MRIKEYVKVEGEK----PVVV------------------AVEPELL----------GG-----KIQVSVVRSLADIAALKPEPEVEKSEGPKVY--KPYDANALPKPKFPGDGSEMNIGG 492          
BLAST of Gcaud9305.t1 vs. uniprot
Match: A0A5J4YIJ0_PORPP (Phycobilisome 31.8 kDa linker polypeptide, phycoerythrin-associated, rod n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YIJ0_PORPP)

HSP 1 Score: 366 bits (939), Expect = 9.080e-117
Identity = 224/499 (44.89%), Postives = 290/499 (58.12%), Query Frame = 0
Query:   41 SMAVEFQEYSGGLDRLTQA------PYSITRYLFKDRPV-----PLTDEDKEAVINAALRQLFGNAYLMEEERAQFYTAESNFRCGRITAREFARAVAKSETYRQRFFERVTQFRFIELNFKHFLGRAPLNQVEYSKHFKIFAAGGYEAEIDSYFDDPEYDEVFGDDIFPFTRFRGTYAPINQFNRMCTIVGGFAGSDKFKPQALVTSLAANVPTPAYSVVDGLPPIPNSEHPSKKYELPAVSLERFINELDIAQARAYQLQIELDRAYAELDGSRDIIDPFKAMVSDMNITPLYGKNYGNGAVKVFPGQYEGAPVASWGPSGVDRINGPTRRPAAEVSKKEKELERVKQLIVDIERRIAVLSADREKPALTPPPMTFEIEGLEFPVVEEEPAEAGPVIIEPAFVAATPGATE-GEEEIAVDPNLLPTTMDTEKDDSGVTTPQPIVVSTKREFADVGKLPKELMEEMEAEKKASGKDFLAGKGGKPSFPGDGSEMVVGG 527
            S AV F+  SGGLDR ++       P  ITR+LFKDRPV      L++ D+EA +    R + GNAY+MEEER +  T ES F  G I+ R+F R VAKS TY++RFFE V+QFRFIELNFKHF+GRAPL+  E SKH++IFAAGGY+AE+DSYFD  EY +VFG D  P+ RFRGTYAP + FN  C + GG+A SDK  P   +  L        + +VDGLP IPNSEHPS+KY +P VS E+   EL IAQ +A  LQIELD AY  L  SR  + PF AM +DM+I PLYGKN      +VF GQ+ G     WG +G D + G +RR AA++  KE +LERVKQL+VD++R +A+  A+ + PA      T  ++  +             V ++P  +A   G     E+EI +                     + I V+  R   D  +  +E  E+ E E   + KD          FPGDGSEM VGG
Sbjct:  135 STAVRFESPSGGLDRYSRVDPAAPGPNVITRFLFKDRPVRRSDPSLSEVDREATMRTVYRNVMGNAYVMEEERDELATLESQFLVGAISTRDFVRGVAKSATYKKRFFESVSQFRFIELNFKHFMGRAPLDMAEMSKHYEIFAAGGYDAEVDSYFDSEEYLDVFGLDTVPYMRFRGTYAPNSTFNLQCRLQGGWARSDKKLPMMSMLPLNNKAAIMPHQIVDGLPVIPNSEHPSQKYNVPKVSREKLQRELLIAQGKANALQIELDAAYTSLASSRAFLAPFAAMAADMDIRPLYGKN-----PQVFAGQFLGVGAGQWGKTGADTVRGRSRRVAADIGVKEFQLERVKQLVVDLQRALALEDAEADAPA------TSLLQAYQ-----------AKVYVKPPVIAKKKGPEPVNEDEITIGQG-----------------DKKIKVTVLRNLGDRTEKLREKPEKEEEEGPRTFKDLYETAKPMKGFPGDGSEMNVGG 594          
BLAST of Gcaud9305.t1 vs. uniprot
Match: A0A1X6NKA8_PORUM (PBS-linker domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKA8_PORUM)

HSP 1 Score: 209 bits (532), Expect = 3.320e-58
Identity = 143/379 (37.73%), Postives = 205/379 (54.09%), Query Frame = 0
Query:   52 GLDRLTQAPYSITRYLFKD-RPVPLTD----EDKEAVINAALRQLFGNAYLMEEERAQFYTAESNFRCGRITAREFARAVAKSETYRQRFFERVTQFRFIELNFKHFLGRAPLNQVEYSKHFKIFAAGGYEAEIDSYFDDPEYDEVFGDDIFPFTRFRGTYAPINQFNRMCTIVGGFAGSDK---------------FKPQALVTSLAANVPTPAYSVVDGLPPIPNSEHPSKKYELPAVSLE---RFINELDIAQARAYQ--LQIELDRAYAELDGSRDIIDPFKAMVSDMNITPLYGKNYGNGAVKV---FPGQY-EGAPVASWGPSGVDRINGPTRRPAAEVSKKEKELERVKQLIVDIERRIAVLSADREKPALT 401
            GLD  TQ PY+ +RY+    + V +TD    E++E  + A  RQ+FGNAY+MEEERA+   AES F+ G +T +E  RA+AKS TYR RFFE  +Q+RFIELNFKH +GR+P +Q E S+H + ++A GYEAEIDSY D  EY  VFGD+  PF RFRG Y P + FN+ C + GG+A SDK                +   L+ S AA  P    +V +  P    S  P+  Y +P  +L     F+++  +A  R+    LQ   ++A      ++D +  F+ MVSDM +    G  Y  G + +   F  Q  + +P+A  G              A  VS+ EK LE  K+ ++ +E+ +A  S    +  +T
Sbjct:    6 GLDTATQQPYTFSRYILGPFQGVEVTDLSGEEERENALRATYRQVFGNAYIMEEERAELAIAESQFKLGALTVKELIRAMAKSSTYRARFFEGASQYRFIELNFKHLMGRSPDSQAEISEHVQRYSAAGYEAEIDSYLDSAEYTTVFGDNTVPFLRFRGAYTPCDSFNKQCALQGGWANSDKAMGGAALSGWNGSDGHQESTLIASYAAGKPVNYEAVAENTPL--KSTAPNW-YAVPDPALAPTPAFVSQKQVAALRSQVAVLQATYEQALLAKLKAKDPLVGFRNMVSDMPVNDR-GATYSGGDLLLANPFARQLGDDSPLAMGGADAGTYKRYSAAMEADSVSRLEKSLEEAKRELLVLEKALAASSPTGSEDKVT 380          
BLAST of Gcaud9305.t1 vs. uniprot
Match: A0A291FEB7_GRIPA (LRC2 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEB7_GRIPA)

HSP 1 Score: 195 bits (496), Expect = 9.410e-53
Identity = 160/468 (34.19%), Postives = 228/468 (48.72%), Query Frame = 0
Query:    1 MAFVSALPVVPSAPCSSFAPARARVARAAGGVGVARRARTSMAVEFQEYSGGLDRLTQAPYSITRYLFKD-RPVPL----TDEDKEAVINAALRQLFGNAYLMEEERAQFYTAESNFRCGRITAREFARAVAKSETYRQRFFERVTQFRFIELNFKHFLGRAPLNQVEYSKHFKIFAAGGYEAEIDSYFDDPEYDEVFGDDIFPFTRFRGTYAPINQFNRMCTIVGGFAGSDKFKPQALVT--------------SLAANVPTPAYSVVDGLPPIPNSEHPSKKYELPAVS-LERFINELDIAQARAY--QLQIELDRAYAELDGSRDIIDPFKAMVSDMNITPLYGKNYGNGAVKVFPG----QYEGAPVASWGPSGVDRINGPTRRPAAEVSKKEKELERVKQLIVDIERRIAVLSADREKPALTPPPMTFEIEGLEFPVVEEEPAEAGPVIIEPAFVAATPGATE 442
            +AFV+  P V S+  + FA    R+   A    VA   R++ A        GLD +TQ  YS +RY+    +P  L    ++ ++E  I AA R +FGNAY+MEEE A+     S ++ G +TA+EF RA+AKS  Y+ RFFE  +Q+RF+ELNF H LGRAP  Q E + H  I+ A G++AEIDSY D  EYD VFGD   PF RFRG Y P + FN+ C + GG+A SDK    A ++              S      T  Y  V G  P+  +      Y  PA++    FI+  ++ +ARA   +L+   +   A+    ++ + PF+AMV DM      G  +G+  + V P     + E A +A  G    D     +      VS+ E++LE  K      E R+     D   P  T   +    + +   + +EE A A P I     V     ATE
Sbjct:    2 VAFVAPTPSVASS-ATRFATGTTRLTNDANVPSVAATRRSAHAPPSMRVLDGLDTVTQDSYSFSRYVLGPFQPSVLNANSSEYEREIAIRAAYRHVFGNAYIMEEELAEVEVTASQYKLGNLTAKEFIRALAKSSAYKTRFFEGASQYRFVELNFMHLLGRAPDTQEEVATHMNIYHAKGFDAEIDSYIDSEEYDSVFGDYNVPFLRFRGAYTPCDSFNKQCALKGGWANSDKAMGGAALSGYNGSDGRQMCDRISAYVTSDTTDYESVAGNSPLLTTSPNWLAYPDPAIAPTPAFISPQEVREARARVEKLREAYNEEIAKTQARKNAMAPFRAMVEDMAPMLDRGVTFGD-PMLVHPEAKLPENESA-LADLGGKSSDYKRFWSTMETNTVSRLERDLEEAKA-----ELRVLEKGVDALTPMSTSVELRSASQDVNVGLDKEEEAIARPRIATKPRVKKVVDATE 461          
BLAST of Gcaud9305.t1 vs. uniprot
Match: A0A7S0ZGR9_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGR9_9RHOD)

HSP 1 Score: 192 bits (487), Expect = 2.430e-51
Identity = 136/381 (35.70%), Postives = 194/381 (50.92%), Query Frame = 0
Query:   51 GGLDRLTQAP----------YSITRYLFKDRPV-----PLTDEDKEAVINAALRQLFGNAYLMEEERAQFYTAESNFRCGRITAREFARAVAKSETYRQRFFERVTQFRFIELNFKHFLGRAPLNQVEYSKHFKIFAAGGYEAEIDSYFDDPEYDEVFGDDIFPFTRFRGTYAPINQFNRMCTIVGGFAGSDKFKPQA---------------LVTSLAANVPTPAYSVVDGLPPIPNSEHPSKKYELPAVSLE---RFINELDI--AQARAYQLQIELDRAYAELDGSRDIIDPFKAMVSDMNITPLY---GKNYGNGAVKVFPGQYEGAPVASWGPSGVDRINGPTRRPAAEVSKKEKELERVKQLIVDIERRIAVLSA 393
            G +DRL  AP          Y+ +RY+            ++ +DKE +I  A+RQ+FGNAYLMEEER +   AES F+ G I  ++F RA+AKS  Y+ RF E   Q+RFIELNFKH LGRAP N  E +KH + +   G+EA+IDSY DD EYD VFG D  PF RFRG Y P + FNR C + GG+A SDK    A               L+++ AA  P   YS+V    P+  +      Y LP  +L     F++  D+   + R  QLQ    +A      S+D ++ +++   +M     Y   G+++  G  +      +  P+AS G    D         + EVS+ E E+E  K  +  +E  ++  +A
Sbjct:   40 GVIDRLDSAPADKFEQTKQVYTFSRYILGPHTAIIAKDGMSADDKEVLIRQAIRQVFGNAYLMEEEREELQIAESQFKNGAIPMKDFIRALAKSSAYQTRFLEGAVQYRFIELNFKHLLGRAPDNHEEIAKHMRTYQQFGFEADIDSYLDDGEYDNVFGYDTIPFMRFRGVYTPCDSFNRQCALQGGWANSDKAMGGAALSGYNGADGRQMSTLISTYAAGKPVD-YSLVAANTPLKTTA--PNWYALPNPALPPMPSFVSPSDVNALKVRLNQLQAAYAKATERSQISKDTLEMWRSAAKEMQGMRGYAPTGESFFGGISQ----SVDNTPLASKGQKSSDYKRFSYNLYSDEVSRLETEIEETKSTLRVLEAALSKSTA 413          
BLAST of Gcaud9305.t1 vs. uniprot
Match: A0A5J4YX63_PORPP (Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YX63_PORPP)

HSP 1 Score: 181 bits (460), Expect = 1.730e-47
Identity = 146/420 (34.76%), Postives = 206/420 (49.05%), Query Frame = 0
Query:   57 TQAPYSITRYLFKDR-----PVPLTDEDKEAVINAALRQLFGNAYLMEEERAQFYTAESNFRCGRITAREFARAVAKSETYRQRFFERVTQFRFIELNFKHFLGRAPLNQVEYSKHFKIFAAGGYEAEIDSYFDDPEYDEVFGDDIFPFTRFRGTYAPINQFNRMCTIVGGFAGSDKFKPQALVT----SLAANVPTPAYSVVDGLPPIPN----SEHPSKK-----YELPAVSLE---RFINELDIAQ--ARAYQLQIELDRAYAELDGSRDIIDPFKAMVSDM----NITPLYGKNYGNGAVKVFPGQYEGAPVASWGPSGVDRINGPTRRPAAEVSKKEKELERVKQLIVDIERRIAVLSADREKPALTPPPMTFEIEGLEFPVVEEEPAE-AGPVIIEPAFVAATPGATEGEEEIA 448
            T+  Y+ +RY+         PV +   +KE V+ A  RQ+FGNAY+MEEERA+    ES F  G ++ +E  RA+AKS TY+ RFFE   Q+RFIEL FKH LGRAP N  E + H + +   GY+AEIDSY D  EYD VFGDD  PF RFRG Y P + FNR C + GG+A SDK    A ++    S    + T   + + G P IP     ++ P K      Y  P  +L     +++  +IA+  +R  +L+     A  +   ++D ++ ++A   +M     I+P+    +G  A KV  G      +A  G                EVS+ E +LE  K        ++ VL A   K   TP   T E + L   V     AE A P+   P   A+ P  T    ++A
Sbjct:   46 TKQVYTFSRYILGPHRAVVAPVAMDPSEKEVVLRAVYRQVFGNAYIMEEERAELRVMESQFLLGELSVKELVRALAKSSTYKVRFFEGAVQYRFIELCFKHLLGRAPDNHEEIAVHMRKYQQEGYDAEIDSYLDAGEYDNVFGDDTVPFLRFRGVYTPCDSFNRQCALQGGWANSDKAMGGAALSGYNGSDGRQMSTMIGNYISGKP-IPYEKVAADTPLKSTAPNWYARPNPALAPQPAYVSAKEIAELRSRVSKLEAAWSVAVKQSAAAKDTVETWRAAAKEMAAMRGISPMGEAYFGGIAQKVDNGA-----LAQLGNKASSYKKYLYAIETDEVSRLEVDLEEAKG-------QLRVLEAAMAKS--TPMTRTAEFKTLTKNVAAVTAAEKADPLSKRPRISASRPKPTPAAAKMA 450          
The following BLAST results are available for this feature:
BLAST of Gcaud9305.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IP86_9FLOR3.140e-26272.59Phycobilisome 32.1 kDa linker polypeptide, phycocy... [more]
R7QQQ6_CHOCR6.700e-19962.93PBS-linker domain-containing protein n=1 Tax=Chond... [more]
A0A291FEB8_GRIPA8.960e-17756.06LRC3 n=1 Tax=Griffithsia pacifica TaxID=35689 RepI... [more]
A0A1X6NJY8_PORUM9.140e-13547.82PBS-linker domain-containing protein n=1 Tax=Porph... [more]
A0A7S0ZG35_9RHOD1.320e-12245.42Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YIJ0_PORPP9.080e-11744.89Phycobilisome 31.8 kDa linker polypeptide, phycoer... [more]
A0A1X6NKA8_PORUM3.320e-5837.73PBS-linker domain-containing protein n=1 Tax=Porph... [more]
A0A291FEB7_GRIPA9.410e-5334.19LRC2 n=1 Tax=Griffithsia pacifica TaxID=35689 RepI... [more]
A0A7S0ZGR9_9RHOD2.430e-5135.70Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YX63_PORPP1.730e-4734.76Phycobilisome 32.1 kDa linker polypeptide, phycocy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 367..394
NoneNo IPR availableCOILSCoilCoilcoord: 273..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 502..527
NoneNo IPR availablePANTHERPTHR34011PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2-RELATEDcoord: 76..244
NoneNo IPR availablePANTHERPTHR34011:SF5PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2coord: 76..244
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..527
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
IPR001297Phycobilisome linker domainPFAMPF00427PBS_linker_polycoord: 77..202
e-value: 9.9E-40
score: 135.5
IPR001297Phycobilisome linker domainPROSITEPS51445PBS_LINKERcoord: 47..228
score: 28.403496
IPR038255Phycobilisome linker domain superfamilyGENE3D1.10.3130.20Phycobilisome linker domaincoord: 73..209
e-value: 1.0E-39
score: 137.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1188_length_12866_cov_4.640157contigNODE_1188_length_12866_cov_4.640157:10867..12450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9305.t1Gcaud9305.t1Gracilaria caudata M_176_S67 malemRNANODE_1188_length_12866_cov_4.640157 10867..12450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9305.t1 ID=Gcaud9305.t1|Name=Gcaud9305.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=528bp
MAFVSALPVVPSAPCSSFAPARARVARAAGGVGVARRARTSMAVEFQEYS
GGLDRLTQAPYSITRYLFKDRPVPLTDEDKEAVINAALRQLFGNAYLMEE
ERAQFYTAESNFRCGRITAREFARAVAKSETYRQRFFERVTQFRFIELNF
KHFLGRAPLNQVEYSKHFKIFAAGGYEAEIDSYFDDPEYDEVFGDDIFPF
TRFRGTYAPINQFNRMCTIVGGFAGSDKFKPQALVTSLAANVPTPAYSVV
DGLPPIPNSEHPSKKYELPAVSLERFINELDIAQARAYQLQIELDRAYAE
LDGSRDIIDPFKAMVSDMNITPLYGKNYGNGAVKVFPGQYEGAPVASWGP
SGVDRINGPTRRPAAEVSKKEKELERVKQLIVDIERRIAVLSADREKPAL
TPPPMTFEIEGLEFPVVEEEPAEAGPVIIEPAFVAATPGATEGEEEIAVD
PNLLPTTMDTEKDDSGVTTPQPIVVSTKREFADVGKLPKELMEEMEAEKK
ASGKDFLAGKGGKPSFPGDGSEMVVGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001297PBS_linker_dom
IPR038255PBS_linker_sf