Gcaud9303.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9303.t1
Unique NameGcaud9303.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length701
Homology
BLAST of Gcaud9303.t1 vs. uniprot
Match: A0A2V3ILL2_9FLOR (Signal recognition particle subunit SRP72 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILL2_9FLOR)

HSP 1 Score: 884 bits (2285), Expect = 3.550e-316
Identity = 475/701 (67.76%), Postives = 567/701 (80.88%), Query Frame = 0
Query:    1 MPASELQDGAVDELQQLFNRGQYETVLNRVNQFRKRNKKRSPSVSHILDAARAFSLIHLGRADEALPSIEALLQTKSPPFKEQLLYAKAYAAWAINERLVQAMDTTAPMHGQDVQKLKAQLLYRAGRYDDAANLYERLLTQARNTLREKKEPAATSRWRLPGITARATQVASPVTAAELEQLTSAVNELATNAMASMILARTHEKLPSIQDGLRPSYEIEYNAACSHIALEDFENAQACLEKAEALINSELDEEDDDIEEATAPLFVQQAYLNHMAGDIEAAKQSYYEVVNGRRCDAASLAVAANNLTVAIGQLALGKATLSVAQDGTRSLSKQQHEALVEGLKKMKTTASRNVIRKLTSHQRQAMGRNRAVLFVQMGRLDACRSEIEMLKVHYPDDALVRLLEASLQAKKGQLQNADQLLSEAADTPVIRAARVQLAASHGEKERAAELLQKLFPDSPAAVRTAASFLEQSNQVQDGIALLKEFVSNASADLKASANRELAALLLRNGFYRESAEILRDCIKASRSDPLATAQLAVATSHFDPDEADRIASALPGTSLRTTGEDAERLEQLPPPKRKHLSNRTLDASNDAEDKLLTATPRRDKKKKPXXX-KLPKNYDPDGPPPDPERWLPKTLRSGYRKKKVKRDQAPFRGSQGADAASAEAAXXXXXXXXXXXXXXXXXXTLPPRSRPRMQRRKKGRK 700
            M A+EL   AVDEL+QLFNRGQYE +L RVNQFRKRNKK SPS+ H L+AARAF+LI+LG++++ALPSIEALL+ K+PPFKEQ+ YA+AYAAWA NER+ +A+D  +   G D  KL++QLLYRAGRY +AA LY RLL +AR+ L+EKK P ATSRWR  G+ +R+ QV  PVTA E+EQLTSAVNELATNAMAS ILA  +++LP+IQ+GLR SYE++YNAAC HIA+ DFE+A+  LE A+ALINSELDEE DD+EEAT+PLFVQQAYL HMAGDIE+AKQSYY+++ GRRCDAA+LAVAANN TVAIGQLALGK+ LS+ QDGTR+LSKQQHEALVEGLKKMK TASRNV+RKLTS QRQAM RNRAVL+VQ+GRLD+CRSEIEMLKVHYPDD LV L+EASL AK+G+L+ AD +LS+AADT V+RAARVQLAA++  K+ AA+LLQ LFPD PAAV TAASFLEQ  +V++G +LL+  VS +S  LK  ANRELAA+LLRNG Y+ESA ILR C   ++ D L+TAQL VATSHFDPD+ADRIAS L  T      +DAE+LE LPPPKRKH++NR  D   + + + L A+    KKK  XXX +LPKNY+P+GPPPDPERWLPKTLRSGY+KKK KRDQ  FRGSQGADAASAE A                   LPPR+RPR+QRRKK +K
Sbjct:    1 MTATELSLSAVDELRQLFNRGQYEALLTRVNQFRKRNKKISPSLDHALEAARAFALIYLGKSEQALPSIEALLKLKNPPFKEQISYARAYAAWASNERVTEAIDVVSDFTGADADKLRSQLLYRAGRYGEAAELYGRLLQEARDALKEKKHPTATSRWRFAGLGSRSAQVTPPVTAVEVEQLTSAVNELATNAMASFILAGDYQELPAIQEGLRQSYEVQYNAACKHIAVHDFESAETSLETADALINSELDEEVDDVEEATSPLFVQQAYLRHMAGDIESAKQSYYQIITGRRCDAATLAVAANNFTVAIGQLALGKSGLSITQDGTRALSKQQHEALVEGLKKMKATASRNVMRKLTSKQRQAMARNRAVLYVQIGRLDSCRSEIEMLKVHYPDDVLVFLVEASLLAKQGKLEAADNILSQAADTQVVRAARVQLAAAYDNKDGAAQLLQTLFPDEPAAVCTAASFLEQCGKVEEGFSLLRRLVSRSSGQLKEKANRELAAMLLRNGRYKESAAILRHCTSTAKKDMLSTAQLVVATSHFDPDDADRIASVLHDTGSSAVEQDAEKLEGLPPPKRKHMANRIPDIGENNQYRALDASSSHGKKKXXXXXXRLPKNYNPNGPPPDPERWLPKTLRSGYKKKKQKRDQVSFRGSQGADAASAEEAAQKMAEKPDSKAAQQHP--LPPRARPRLQRRKKAKK 699          
BLAST of Gcaud9303.t1 vs. uniprot
Match: R7QSM7_CHOCR (Signal recognition particle subunit SRP72 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSM7_CHOCR)

HSP 1 Score: 390 bits (1001), Expect = 2.930e-122
Identity = 277/683 (40.56%), Postives = 372/683 (54.47%), Query Frame = 0
Query:   12 DELQQLFNRGQYETVLNRVNQFRKRNKKRSPSVSHILDAARAFSLIHLGRADEALPSIEALLQTKSPPFKEQLLYAKAYAAWAINERLVQAMDTTAPMH---GQDVQKLKAQLLYRAGRYDDAANLYERLLTQARNTLREKKEPAATSRWRLPGITARATQVASPVTAAELEQLTSAVNELATNAMASMILARTHEKLPSI--QDGL-----RPSYEIEYNAACSHIALEDFENAQACLEKAEALINSELDEEDD----------DIEEATAPLFVQQAYLNHMAGDIEAAKQSYYEVVNGRRCDAASLAVAANNLTVAIGQLALGKATLSVAQDGTR----SLSKQQHEALVEGLKKMKTTASRNVIRKLTSHQRQAMGRNRAVLFVQMGRLDACRSEIEMLKVHYPDDALVRLLEASLQAKKGQLQNADQLLS-EAADTPVIRAARVQLAASHGEKERAAELLQKLFPDSPAAVRTAASFLEQSNQVQDGIALLKEFVSNASADLKASANRELAALLLRNGFYRESAEILRDCIKASRSDPLATAQLAVATSHFDPDEADRIASALPGTSLRTTGEDAERLEQLPPPKRKHLSNRTLDASNDAEDKLLTATPRRDKKKKPXXX-----KLPKNYDPDGPPPDPERWLPKTLRSGYRKKKVKRDQAPFRGSQGADAASAEAA 664
            D+L+ LF RG+++ V+ R +    R K    +   +L + R  SL+H GR  EA  +  A+      P+   L++A+ Y AWA  + L  A  +   +H   G D +KL+AQLLYR+G Y ++A+++  LL   RN L + + PA+TSRWRLPG+     ++  P+T AEL+ L  AVNELATNA A+ +LA   +   +I  Q G      R + E E    C H   +          KA+A++ ++ +EE +          + EE  AP+ VQ AYL H+ G ++ A++ Y + +  R  D ASLAVAANNLTVA+GQLA GK   S    GT     SL K+QHEALVEGLKKM+ T+ R V RKL  +QR+AM  NRAVL VQMGR DACR+E+  LK  +P +ALV L+EASL AK+G L+ AD +L+    D+ V+RAARVQL                                                   +S     SA   L+++LLRN  Y E+A +LR+   A+ SD +A AQL VATS+FD  EA+R A  LP +       DA++LE LP                                   XXX     +LPKNYDP+GPPPDPERWLPKTLRSGY++KK K DQ  FRGSQGADAA+A+AA
Sbjct:   13 DQLRDLFLRGEHDAVVTRCDLLLNRKKLDQKASRTLLQSIRFASLLHSGRIPEASTAATAI------PYSPSLVFARHYLAWASAD-LEAASSSVQIVHNLPGSDARKLEAQLLYRSGSYAESASIFSALLAVTRNDLEDARRPASTSRWRLPGLATAPEKI--PLTRAELDLLRDAVNELATNATAAFVLAGKPDDALAIVRQVGTWSKETRKATENEGGLLCGHYDGD---------RKAKAIVLAQTEEEVEXXXXXXXXAGETEEIMAPIRVQMAYLTHLKGGVQEAEKLYADAMRDRNADPASLAVAANNLTVALGQLAFGKRNDSAEISGTTANGPSLPKEQHEALVEGLKKMRATSGRTVERKLALNQRRAMAANRAVLLVQMGRYDACRAELAKLKTEFPKEALVPLIEASLVAKQGNLRTADSILTGNVDDSEVVRAARVQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSGADALSAKTALSSVLLRNAKYEEAAGVLREVCNANPSDSVAQAQLVVATSYFDATEAERAALLLPSSMSTQNDIDAKKLEALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPKNYDPEGPPPDPERWLPKTLRSGYKRKKAK-DQNNFRGSQGADAAAADAA 676          
BLAST of Gcaud9303.t1 vs. uniprot
Match: A0A7S0BI04_9RHOD (Signal recognition particle subunit SRP72 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BI04_9RHOD)

HSP 1 Score: 184 bits (466), Expect = 7.450e-47
Identity = 169/497 (34.00%), Postives = 255/497 (51.31%), Query Frame = 0
Query:  187 NELATNAMASMI-LARTHEKLPSIQ--DGLRPSYEIEYNAACSHIALEDFENAQACL----EKAEALINSELDEEDDDIEEATAPLFVQQAYLNHMAGDIEAAKQSYYEVVNGRRCDAASLAVAANNLTV----AIGQLALGKATLSVAQDGTRSLSKQQHEALVEGLKKMKTTASRNVIRKLTSHQRQAMGRNRAVLFVQMGRLDACRSEIEMLKVHYPDDALVRLLEASLQAKKGQLQNADQLLSEAADTPVIRAARVQLAASHGEKERAAELLQKLFPDSPAAVRT------AASFLEQSNQVQDGIALLKEFVSNASADLKASANRELAALLLRNGFYRESAEILRDCIKASRSDPLATAQLAVATSHFDPDEADRIASALPGTSLRTTGE-DAERLEQLPPPKR-KHLSNRTLDASNDAEDKLLTATPRRDKKKKPXXXKLPKNYDPDGPPPDPERWLPKTLRSGYRKKKVKRDQAPFRGSQGADAASAEAA 664
            +E+ TN   ++  L     ++P +Q  D    + E+ +N AC+ I+  D + A+  L    EK   ++ +E   E+D  +E  A + VQ AY+  + G  EAA  SY ++++ +  D A  AVA+NNL V    A G+ A G A                        K++K+T +  +  KLT  Q Q MG NRA++ ++M RLD   SEIE LK    D   + L+++S  +K  +   A++LL    +  + +AA  QL    G+ E AA  L +L   SP+A+ T      AA   E+++ +  G+A  KE+  +   +L  S+ RELA +  RN    E+   LRD +  S  D  A A + +A+S+ D + A+  AS LP  +L+   E DA  LE LP P+R   +  R +     +E+      P+  KKK+    K P+  +P+GP  DPERW+PK +RSG RKKK KR  A  RGSQGA  A+ EAA
Sbjct:   27 SEVLTNLTFNLASLGGDSSEIPRLQADDPESQTSEVLFNLACAMISAGDLDQAERTLNDAYEKGSKILEAEGASEEDANDEL-AGVLVQLAYVQQLKGQNEAASNSYEKLLDQKISDLAVAAVASNNLAVLKWDAPGRNARGLA------------------------KRLKSTTAPGLEYKLTKPQLQIMGCNRAIVNLEMSRLDVATSEIEALKTLAADSDNLTLIQSSQLSKSKKFDEAEELLKTIENPLIRKAANAQLKLVRGDFEGAANSLAEL-RSSPSAIATSMTLYEAAGMPEKASLLVKGVA--KEWADSGRKELVLSSLRELAEMFHRNKMDSEAVGALRDVLALSPDDEAAVANIVIASSNMDYETAENYASRLP--ALQGMREMDAIELEALPVPRRGADMDKRRVRIDAGSEEN----APKTKKKKR--KNKKPQTLNPNGP--DPERWIPKHMRSGARKKK-KRADAVSRGSQGAGLAATEAA 484          
BLAST of Gcaud9303.t1 vs. uniprot
Match: A9THX6_PHYPA (Signal recognition particle subunit SRP72 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9THX6_PHYPA)

HSP 1 Score: 185 bits (470), Expect = 2.680e-46
Identity = 179/612 (29.25%), Postives = 282/612 (46.08%), Query Frame = 0
Query:   84 LLYAKAYAAWAINERLVQAMDTTAPMHGQDVQKLKAQLLYRAGRYDDAANLYERLLTQARNTLREKKEPAATSRWRLPGITARATQVASPVTAAELEQLTSAVNELATNAMASMILARTHEKLPSIQDGL----RPSYEIEYNAACSHIALEDFENAQACLEKA-----EALINSELDEEDDDIEEATAPLFVQQAYLNHMAGDIEAAKQSYYEVVNGRRCDAASLAVAANNLTVAIGQLALGKATLSVAQDGTRSL--SKQQHEALVEGLKK---MKTTASRNVIRKLTSHQRQAMGRNRAVLFVQMGRLDACRSEIEMLKVHYPDDALVRLLEASLQAKKGQLQNADQLLSEAADTPV-----IRAARVQLAASHGEKERAAELLQKLFP--DSPAAVRTAASFLEQSNQVQDGIALLKEFVS--------NASADLKASANRELAALLLRNGFYRESAEILRDCIKASRSDPLATAQ----LAVATSHFDPDEADRIASALPGTSLR-TTGEDAERLEQLPPPKRKHLSNRTLD-ASNDAEDKLLTATPRRDKKKKPXXXKLPKNYDP--DGPPPDPERWLPKTLRSGYRKKKVKRDQAPFRGSQGADA 658
            L + KAY  + I       +         +V +L+AQ+LYR G +++  + YE L  Q +                                           N+L TN +A+ ++     ++PS+ + L    R  +EI +NAAC+ +   +F  A+  L  A     EALI  ++ EE  DIE+  AP+ VQ AY+  M G  E A  SY  ++  +  DA SLAVA NNL               +A  G+R L  S ++ E L+E  KK    K   + N+  +LT  Q++A+  NR +L +   +LD  R     L   +PD+ +  +L ASL  K+ + Q AD+LL++ A+        +   R Q AA+ G    AA+ L+++    + P  + T  +   +   V++   +L E +              +  S  +E AA  L++     +A++    +K+S   P+  ++    L  + ++ +PD+A      LP   LR  +G D E LE++PP        R  + A    E +     P++ +K+KP     PK +DP   GPPPDPERWLP+  RS YR KK KR+QAP RGSQG+ A
Sbjct:   99 LTFQKAYCLYRIGRLPAALIALKGLERNVNVLQLEAQILYRNGDWEECISSYETLFKQHKVV----------------------------------------ANDLKTNIVAAYVVGGRAAEVPSLMETLKVHPRSGFEIAHNAACALVEKGEFAKAEELLMMAHRIGQEALIEEDVPEE--DIEDDLAPISVQLAYVQQMLGRFEEAIGSYNAILKRKPADAPSLAVATNNL---------------IALKGSRDLFDSLKKTEKLLE--KKDASQKLQLAENLENRLTMRQKEALCFNRCLLLLHSNKLDQAREFTSSLSKTFPDNPIPAILSASLLWKENKAQKADELLADFAEKHEDVGKDVHFVRAQAAAAAGNYLLAAKCLEQITSARNKPGMIATLVALKSKGGIVKEAETVLDEAIQYWDSYMGDEDQTSVLESILQEAAAFKLKHNKMEAAAKVYERLMKSS--SPVVKSEALHGLVASYAYTNPDKAAEYEKQLP--PLRGVSGLDVEALEKVPPWLLNVKRGRAAEEAGEKKEHRAENDKPKKKRKRKPL---YPKGFDPANPGPPPDPERWLPRKERSSYRPKKGKRNQAPIRGSQGSVA 644          
BLAST of Gcaud9303.t1 vs. uniprot
Match: A0A6P6TL77_COFAR (Signal recognition particle subunit SRP72 n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6TL77_COFAR)

HSP 1 Score: 172 bits (435), Expect = 9.060e-42
Identity = 180/630 (28.57%), Postives = 284/630 (45.08%), Query Frame = 0
Query:   52 RAFSLIHLGRADEALPSIEALLQTKSPPFKEQLLYAKAYAAWAINERLVQAMDTTAPMHGQ-DVQKLKAQLLYRAGRYDDAANLYERLLTQARNTLREKKEPAATSRWRLPGITARATQVASPVTAAELEQLTSAVNELATNAMASMILARTHEKLPSIQDGLR----PSYEIEYNAACSHIALEDFENAQACLEKAEALINSELDEE---DDDIEEATAPLFVQQAYLNHMAGDIEAAKQSYYEVVNGRRCDAASLAVAANNLTVAIGQLALGKATLSVAQDGTRSLSKQQHEALVEGLKKMKTTASRNVIRKLTSHQRQAMGRNRAVLFVQMGRLDACRSEIEMLKVHYPDDALVRLLEASLQAKKGQLQNADQLLSEAAD-----TPVIRAARVQLAASHGEKERAAELLQKL--FPDSPAAVRTAASFLEQSNQVQDGIALLKEFV---SNA-SADLKASA-NRELAALLLRNGFYRESAEILRDCIKASRSDPLATAQLAVATSHFDPDEADRIASAL-PGTSLRTTGEDAERLEQLPPPKRKHLSNRTLDASNDAEDKLLTATPRRDKKKKPXXXKLPKNYDP--DGPPPDPERWLPKTLRSGYRKKKVKRDQAPFRGSQGADA 658
            +  +LI   + D+AL +I    Q  +  F     + KAY  +  N +L +A+++   + G  +   L++Q+LYR G+ D   ++Y++LL                                            S +  L  N +A ++ A    ++  + D LR     S+E+ YN ACS I    +++A+  L  A  +    L +E   DD+IE   AP+ VQ AY+  M G+ + A  SY +++     D +SLAVA NNL    G             DG R L +   +   +G +  K T   ++  KL++ QR+A+  NR +L +   +LD  R  +  L   +P   +  LL+A++  ++ +   A+++L + A+     + VI  AR Q+AA+ G  + AAE L K+      PA V T  S  E++  +    A+    +   SNA + D K     +E AA  LR+G   E+A +  + +K S     A   L    +H D ++A+     L P   L+    D + LE+    K    S  T   +   + K    T  +      XX K PK +DP   GPPPDPERWLPK  RS YR K+  +  A  RGSQGA A
Sbjct:   61 KVVALIKNDKIDQALTTI----QESAKKFPVDFSFLKAYCLYRQN-KLEEALESLKGLEGSTETMLLESQILYRLGKVDACVDVYQKLLK-------------------------------------------SKIQSLEINVIAGLVSAGKANEVQGVMDSLRVKATSSFELAYNTACSLIERGKYKDAEQLLLSARRIGQETLMDENFADDEIENELAPIAVQLAYVQQMLGNTQDALVSYTDIIKRNLADESSLAVAINNLIALKGP--------KDVSDGLRKLDRLIEKG--DGTQSYKLTHGLDL--KLSTMQREALYTNRMLLLLHSNKLDQARELVTALPGMFPLSVMPVLLQAAMHVRENKAGKAEEILGQFAEKFPEKSKVILLARAQIAAAAGHPQVAAESLAKIADIQHMPATVATIVSLKERAGDIDGAEAVFDSSIRWWSNAMTEDNKLDIIMQEAAAFKLRHGRKEEAARLYEELVK-SHGSVGALVGLIQTVAHADIEKAETYEKQLKPLPGLKAV--DVDGLEKTSGAKPVE-SGPTAGIAEAYDAK----TKEKXXXXXXXXPKYPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVA 622          
BLAST of Gcaud9303.t1 vs. uniprot
Match: A0A1U7XDW2_NICSY (Signal recognition particle subunit SRP72 n=2 Tax=Nicotiana TaxID=4085 RepID=A0A1U7XDW2_NICSY)

HSP 1 Score: 167 bits (422), Expect = 4.470e-40
Identity = 181/637 (28.41%), Postives = 289/637 (45.37%), Query Frame = 0
Query:   49 DAARAFSLIHLGRADEALPSIEALLQTKSPPFKEQLLYAKAYAAWAINERLVQAMDTTAPMHGQDVQKL-KAQLLYRAGRYDDAANLYERLLTQARNTLREKKEPAATSRWRLPGITARATQVASPVTAAELEQLTSAVNELATNAMASMILARTHEKLPSIQDGLR----PSYEIEYNAACSHIALEDFENAQACLEKAEALINSELDEE---DDDIEEATAPLFVQQAYLNHMAGDIEAAKQSYYEVVNGRRCDAASLAVAANNLTVAIGQLALGKATLSVAQDGTRSLSKQQHEALVEGLKKMKTTASRNVIRKLTSHQRQAMGRNRAVLFVQMGRLDACRSEIEMLKVHYPDDALVRLLEASLQAKKGQLQNADQLLSEAADT-----PVIRAARVQLAASHGEKERAAELLQKLFPD---SPAAVRTAASFLEQSNQVQDGIALLKEFV---SNASADLK--ASANRELAALLLRNGFYRESAEILRDCIKASRSDPLATAQLAVATSHFDPDEADRIASAL-PGTSLRTTGEDAERLEQLPPPKRKHLSNRTLDASNDAEDKLLTATPRRDKKKKPXXXKLPKNYDP--DGPPPDPERWLPKTLRSGYRKKKVKRDQAPFRGSQGADAASA 661
            DA R    + L +AD    ++ A+ ++K       L + KAY  +  N +L QA+++     G     L ++Q+LYR G+ + + ++Y++L           ++P                                 ++ L  N +A ++ A     +    D +R     S+E+ YN ACS I  + +++A+  L  A  +    L EE   DDD+E   AP+ VQ AY+  + G+ + A  SY  +V     D +SLAVA NNL    G             DG R L K   ++  +G +K +    R +  KL+  QR+A+  NR +L +   ++D  R  + +L   +P   +  LL+A++  ++ +   A+++L   AD       VI  AR Q+AA+ G  + AAE L K+ PD    PA V T  S  E++  +    A+    +   SNA  +    +S  +E AA  LR+G   E+A +  + +K+  S   A   L    +H + ++A+     L P   L++   D + LE+    K  H+    +    +A+ K              XX K PK +DP   GPPPDPERWLPK  RS YR K+  +  A  RGSQGA A  A
Sbjct:   56 DAIRC-KXVALIKADSIGEALVAIQESKKAAI--DLSFFKAYCLYRQN-KLDQALESLTGQEGSTASMLLESQILYRLGKMEASVDIYQKL-----------QKPQ--------------------------------IDSLEINLVAGLVSAGRASDVQGTLDSIRVKATSSFELAYNTACSLIERQKYKDAEQLLLSARRIGQETLMEENLADDDVEVELAPIAVQLAYVQQILGNTQEAVASYTNLVKRNLADESSLAVAVNNLIALKGP--------KDVSDGLRKLDKLVEKS--DGPQKFQL--GRGLDLKLSQKQREAIYTNRMLLLLHSNKMDQARELVAVLPDLFPGSLMPVLLQAAVHVRENKAGKAEEILGHFADKFPDKCKVILLARAQVAAAAGHPQIAAESLAKI-PDIQHKPATVATLVSLKERAGDIDGADAVFDSAIRWWSNAMTENNKLSSIMQEAAAFKLRHGRKEEAARLYEELVKSHGSIE-ALVGLIQTAAHGNVEKAEAYEKQLKPLPGLKSI--DVDSLEKTSGAK--HVETVPIVGVTEAKGKDXXXXXXX------XXPKYPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVAKEA 621          
BLAST of Gcaud9303.t1 vs. uniprot
Match: A0A2Z7BML6_9LAMI (Signal recognition particle subunit SRP72 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BML6_9LAMI)

HSP 1 Score: 165 bits (417), Expect = 2.220e-39
Identity = 159/507 (31.36%), Postives = 245/507 (48.32%), Query Frame = 0
Query:  186 VNELATNAMASMILARTHEKLPSIQDGLR----PSYEIEYNAACSHIALEDFENAQACLEKAEALINSELDEE---DDDIEEATAPLFVQQAYLNHMAGDIEAAKQSYYEVVNGRRCDAASLAVAANNLTVAIGQLALGKATLSVAQDGTRSLSKQQHEALVEGLKKMKTTASRNVIRKLTSHQRQAMGRNRAVLFVQMGRLDACRSEIEMLKVHYPDDALVRLLEASLQAKKGQLQNADQLLSEAAD-----TPVIRAARVQLAASHGEKERAAELLQKL--FPDSPAAVRTAASFLEQSNQVQDGIALLKEFVSNASADLKASANR------ELAALLLRNGFYRESAEILRDCIKASRSDPLATAQLAVATSHFDPDEADRIASAL-PGTSLRTTGEDAERLEQLPPPKRKHLSNRTLDASNDAEDKLLTATPRRDKKKKPXXX-----KLPKNYDP--DGPPPDPERWLPKTLRSGYRKKKVKRDQAPFRGSQGADAASAEAA 664
            ++ L  N +A ++ A     +    D L+     S+E+ YNAACS I    +++A+  L  A  +    L EE   DDDIE   AP+ VQ AY+ H+ G+ + A +SY  ++     D +SLA++ NN         +G      A DG R L K   ++  EG   +    +R++  KL++ Q++A+  NR +L +   ++D  R    +L   +P+  L  LL+A++  K+ +   A++LL ++A      + +I  AR Q+AA+ G  + AA+ L K+      PA V T  S  E++  + DG   + E      +D     N+      E A+  LR+G   E+A +  + +K   S   A   L   TSH D D+A+     L P  +L+    D + LE+    K    +  TL  +   E K          K+KPXXX     K PK +DP   GPPPDPERWLPK  RS YR K+  +  A  RGSQGA     E++
Sbjct:  150 IDSLEINFVAGLVSAGRASDVQGTMDSLKVKATSSFELAYNAACSLIERNKYKDAEQLLLSARRIGQETLMEENLADDDIEIELAPVAVQLAYVKHVLGNSQEAFESYSNIIKRNLADESSLAISINNY--------VGLKGPKDASDGLRKLDKLLEKS--EG--PLTFRLARDLDLKLSTKQKEAIFVNRLLLLLHSNKVDQARELASVLPGMFPNSILPVLLQAAVHVKENKANKAEELLGQSASKFPDKSNIILLARAQIAAAAGHPQIAADSLLKITDIQHKPATVATLVSLRERAGDI-DGADAVFEAAIRWWSDAMTEDNKLDIIMQEAASFKLRHGKKDEAARLYEELVKKHGSIE-ALVGLIQTTSHTDIDKAEAYEKQLKPLYNLKAI--DVDGLEKTSGAKHFESNGHTLGIAEAYELK---------NKEKPXXXXXXXPKYPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQIRGSQGAVVKEKESS 631          
BLAST of Gcaud9303.t1 vs. uniprot
Match: A0A7N2L946_QUELO (Signal recognition particle subunit SRP72 n=4 Tax=Fagaceae TaxID=3503 RepID=A0A7N2L946_QUELO)

HSP 1 Score: 165 bits (417), Expect = 2.320e-39
Identity = 177/634 (27.92%), Postives = 283/634 (44.64%), Query Frame = 0
Query:   52 RAFSLIHLGRADEALPSIEALLQTKSPPFKEQLLYAKAYAAWAINERLVQAMDTTAPMHGQDVQKL-KAQLLYRAGRYDDAANLYERLLTQARNTLREKKEPAATSRWRLPGITARATQVASPVTAAELEQLTSAVNELATNAMASMILARTHEKLPSIQDGLR----PSYEIEYNAACSHIALEDFENAQACLEKAEALINSELDEE---DDDIEEATAPLFVQQAYLNHMAGDIEAAKQSYYEVVNGRRCDAASLAVAANNLTVAIGQLALGKATLSVAQDGTRSLSK-----QQHEALVEGLKKMKTTASRNVIRKLTSHQRQAMGRNRAVLFVQMGRLDACRSEIEMLKVHYPDDALVRLLEASLQAKKGQLQNADQLLSEAAD-----TPVIRAARVQLAASHGEKERAAELLQKLFPD---SPAAVRTAASFLEQSNQVQDGIALLKEFV---SNA-SADLKASA-NRELAALLLRNGFYRESAEILRDCIKASRSDPLATAQLAVATSHFDPDEADRIASAL-PGTSLRTTGEDAERLEQLPPPKRKHLSNRTLDASNDAEDKLLTATPRRDKKKKPXXXKLPKNYDP--DGPPPDPERWLPKTLRSGYRKKKVKRDQAPFRGSQGA 656
            +  +LI   R D+AL +I++   TK  P      + KAY  +  N +L +A+++           L ++Q+LYR G+ D   ++Y++L                                             S ++ L  N++A ++ +    ++  + D LR     ++E+ YN ACS I    + +A+  L  A  +    L E+   DDDIE   AP+ VQ AY+  + G  + A ++Y +++N    D  SLAVA NNL    G             DG R L +      Q+  L  GL         N+  KL+  QR+A+  NR +L +   RLD  R  +  +   + D  +  LL+A++  ++ +   A+++L + A+     + V+  AR Q+AA+ G  + AAE L K+ PD    PA V T  S  E++  +    A+L   +   SNA + D K +   +E A+  LR+G   ++A +  + +K S  +  A   L    +  D ++A+     L P   LR  G D + LE+    K    S   + A+   E+              P   + PK +DP   GPPPDPERWLPK  RS YR K+  +  A  RGSQGA
Sbjct:   62 KVVALIKADRIDDALSTIQS---TKKVPI--DFTFFKAYCLYRQN-KLDEALESLKTQETNSATMLLESQILYRLGKMDACVDIYQKLQK-------------------------------------------SKIDSLEINSVAGLVSSGRASEVQGMLDALRVKATSNFELAYNTACSLIERNKYTDAEQLLLSARRIGQETLMEDNLPDDDIEIELAPIAVQLAYVQQLLGHTQEASEAYTDIINRDLADEPSLAVAVNNLIALKGP--------KDVSDGLRKLDRLKEKDSQNFQLAHGL---------NL--KLSPKQREAVYANRVLLLLHANRLDQARELVAAVSDMFADSVMPVLLQAAVFVRENKAVRAEEVLGQFAEKFPDKSKVVLLARAQVAAAAGHPQIAAESLAKI-PDIQHMPATVATLVSLKERAGDIDGAAAVLDSAIKWWSNAMTEDNKLNIIMQEAASFKLRHGHEEDAARLYEELVK-SHGNMEALVGLVTTVARVDVNKAETYEKQLKPLPGLR--GVDVDSLEKTSGAKHVDGSASHVGATEAYEEGKSKXXXXXXXXXXP---RYPKGFDPANPGPPPDPERWLPKRERSSYRPKRKDKRAAQVRGSQGA 620          
BLAST of Gcaud9303.t1 vs. uniprot
Match: A0A5J4ZUS8_9ASTE (Signal recognition particle subunit SRP72 n=2 Tax=Nyssaceae TaxID=4289 RepID=A0A5J4ZUS8_9ASTE)

HSP 1 Score: 163 bits (413), Expect = 7.330e-39
Identity = 179/634 (28.23%), Postives = 280/634 (44.16%), Query Frame = 0
Query:   55 SLIHLGRADEALPSIEAL--LQTKSPPFKEQLLYAKAYAAWAINERLVQAMDTTAPMHGQD-VQKLKAQLLYRAGRYDDAANLYERLLTQARNTLREKKEPAATSRWRLPGITARATQVASPVTAAELEQLTSAVNELATNAMASMILARTHEKLPSIQDGLR----PSYEIEYNAACSHIALEDFENAQACLEKAEALINSELDEE---DDDIEEATAPLFVQQAYLNHMAGDIEAAKQSYYEVVNGRRCDAASLAVAANNLTVAIGQLALGKATLSVAQDGTRSLSKQQHEALVE-GLKKMKTTASRNVIRKLTSHQRQAMGRNRAVLFVQMGRLDACRSEIEMLKVHYPDDALVRLLEASLQAKKGQLQNADQLLSEAAD-------TPVIRAARVQLAASHGEKERAAELLQKL--FPDSPAAVRTAASFLEQSNQVQDGIALLKEFVSNASADLKASANR------ELAALLLRNGFYRESAEILRDCIKASRSDPLATAQLAVATSHFDPDEADRIASAL-PGTSLRTTGEDAERLEQLPPPKRKHLSNRT---LDASNDAEDKLLTATPRRDKKKKPXXXKLPKNYDPD--GPPPDPERWLPKTLRSGYRKKKVKRDQAPFRGSQGA 656
            +LI     DEAL +IE+   L   +  FK   LY K         +L +A+++     G      L++Q+L+R G+ DD  ++YE+L                                             S ++ L  N +A ++ A    K+    + LR     S+E+ YN ACS I +  + +A+  L  A  +    L +E   DD+IE   AP+ VQ AY+  + G  +AA +SY +++     D +SLAVA NNL            +L   +D + SL K   + L+E G        +  +  KL+  QR+A+  NR +L +   R+D  R  +  L   +PD  +V LL+A++  ++ +   A++LL + A+       + V+  AR Q+AA+ G  + AAE L K+      PA V T  S  E++  +    A+L   +   S D     N+      E A+  L++G    +A +  D +K   S       +  A +H D D+A+     L P   L+    D + LE+    K  H+ N     +    +A+ K              XX + PK +DP   GPPPDPERWLPK  RS YR K+  +  A  RGSQGA
Sbjct:   66 ALIKADNIDEALSTIESSRRLPIDTSFFKAYCLYRK--------NKLNEALESLKGQEGNTPTMLLESQILFRLGKVDDCLDIYEKLQK-------------------------------------------SKIDSLEINVVAGLVSAGRASKVQGKMEALRVKATSSFELAYNTACSFIEMNKYTDAEQLLLSARRIGQETLMDESLADDEIEIELAPIAVQLAYVQQLLGHTQAAIESYTDIIKRNLADESSLAVATNNLI-----------SLRGPKDVSDSLRKL--DRLIEKGNGPQSFQLASGLDLKLSPKQREAIYINRVLLLLHSNRMDQARELVAALPDMFPDSVMVVLLQAAVLVRENKAGRAEELLGQFAEKFEKSDKSKVVLLARAQIAAAAGHPQIAAESLAKIRDIEKMPATVATLVSLKERAGDIDGADAVLDSAIQWWS-DAMTEDNKLNVIMQEAASFKLKHGQKEAAARLFEDLVKKHGSIEALVGLIRTA-AHTDIDKAEAYEKQLKPLPGLKAV--DVDSLEKTSGAK--HVENGPHVGITEPYEAKSKEXXXXXXX------XXPRYPKGFDPTNPGPPPDPERWLPKRERSTYRPKRKDKRAAQIRGSQGA 623          
BLAST of Gcaud9303.t1 vs. uniprot
Match: UPI000C1CFD11 (signal recognition particle subunit SRP72-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CFD11)

HSP 1 Score: 163 bits (412), Expect = 9.270e-39
Identity = 186/636 (29.25%), Postives = 293/636 (46.07%), Query Frame = 0
Query:   55 SLIHLGRADEALPSIEALLQTKSPPFKEQLLYAKAYAAWAINERLVQAMDTTAPMHGQD----VQKLKAQLLYRAGRYDDAANLYERLLTQARNTLREKKEPAATSRWRLPGITARATQVASPVTAAELEQLTSAVNELATNAMASMILARTHEKLPSIQDGLR----PSYEIEYNAACSHIALEDFENAQACLEKAEALINSELDEED---DDIEEATAPLFVQQAYLNHMAGDIEAAKQSYYEVVNGRRCDAASLAVAANNLTVAIGQLALGKATLSVAQDGTRSLSKQQHEALVEGLKKMKTTASRNVIRKLTSHQRQAMGRNRAVLFVQMGRLDACRSEIEMLKVHYPDDALVRLLEASLQAKKGQLQNADQLLSEAAD-----TPVIRAARVQLAASHGEKERAAELLQKL--FPDSPAAVRTAASFLEQSNQVQ--DGI--ALLKEFVSNASADLKASA-NRELAALLLRNGFYRESAEILRDCIKASRSDPLATAQLAVATSHFDPDEADRIASAL-PGTSLRTTGEDAERLEQLPPPKRKHLSNRTLDASNDAEDKLLTATPRRDKKKKPXXXKLPKNYDP--DGPPPDPERWLPKTLRSGYRKKKVKRDQAPFRGSQGADAASAEAA 664
            +LI     D+AL +IE         F    ++ KAY  +  N +L +A+++   + GQ+    +  L++Q+L+R G+ D + ++Y+                                         EL++  S +  L  N +AS++ A     +    D LR     S+E+ YN ACS I    +++A+  L  A  +    L EE+   D+IE   AP+ VQ AY++H+ G+ + A +SY  V+     D +SLAVA NN+      +AL K    VA DG R L K     + +G        +R +  KL   QR+A+  NR +L +   ++D  R     L   +PD  +  LL+A++  ++ +   A+++L   AD     + V   AR Q+AAS G  + AAE L K+      PA V T  S  E+   ++  DG+  A ++ + ++ + D K      E A+  LR+G   E+A +  + +K SR    A   L   T+H + ++A+     L P   L+    D   LE+    K  H+ N   D++    +     +         XX K PK +DP   GPPPDPERWLPK  RS +R K+  +  A  RGSQGA   S EAA
Sbjct:   63 ALIKNDSVDKALSAIEQYSNKSWIDF----VFFKAYCLYRKN-KLDEALES---LKGQEKNSAMMLLESQILFRLGKMDASVDIYQ-----------------------------------------ELQK--SKIESLEINVVASLVSAGRASDVQVAMDSLRVKPTSSFELAYNTACSLIERNKYKDAEQLLLSARRIGQESLMEENLANDEIEIELAPIAVQLAYVHHILGNTQEAFESYTNVIKRNLADESSLAVATNNI------IAL-KGPKDVA-DGLRKLDK----LIEKGDGPQTFQLARGLDLKLARKQREAIFVNRLLLLLHSNKMDQARELAFALPSMFPDSVMPPLLQAAVHVRENKANKAEEILGHFADKFPDESKVFLLARAQVAASAGHLQIAAEYLLKISDIQHKPATVATIVSLKERVGDIEGADGVFDAAIQWWSNSMTEDNKLDIIMEEAASFKLRHGRKDEAARLYEELVK-SRGSIGALVGLIQTTAHTNIEKAETYVKQLKPLPGLKAV--DVGSLEKTSGAK--HVEN---DSTASITEAFEAKSKEXXXXXXXXXPKYPKGFDPANPGPPPDPERWLPKRERSSFRPKRKDKRAAQIRGSQGA--VSKEAA 625          
The following BLAST results are available for this feature:
BLAST of Gcaud9303.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILL2_9FLOR3.550e-31667.76Signal recognition particle subunit SRP72 n=1 Tax=... [more]
R7QSM7_CHOCR2.930e-12240.56Signal recognition particle subunit SRP72 n=1 Tax=... [more]
A0A7S0BI04_9RHOD7.450e-4734.00Signal recognition particle subunit SRP72 n=1 Tax=... [more]
A9THX6_PHYPA2.680e-4629.25Signal recognition particle subunit SRP72 n=1 Tax=... [more]
A0A6P6TL77_COFAR9.060e-4228.57Signal recognition particle subunit SRP72 n=3 Tax=... [more]
A0A1U7XDW2_NICSY4.470e-4028.41Signal recognition particle subunit SRP72 n=2 Tax=... [more]
A0A2Z7BML6_9LAMI2.220e-3931.36Signal recognition particle subunit SRP72 n=1 Tax=... [more]
A0A7N2L946_QUELO2.320e-3927.92Signal recognition particle subunit SRP72 n=4 Tax=... [more]
A0A5J4ZUS8_9ASTE7.330e-3928.23Signal recognition particle subunit SRP72 n=2 Tax=... [more]
UPI000C1CFD119.270e-3929.25signal recognition particle subunit SRP72-like n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026270Signal recognition particle, SRP72 subunitPIRSFPIRSF038922SRP72coord: 175..700
e-value: 5.9E-75
score: 251.0
coord: 2..203
e-value: 3.7E-13
score: 46.8
IPR026270Signal recognition particle, SRP72 subunitPANTHERPTHR14094SIGNAL RECOGNITION PARTICLE 72coord: 7..699
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 179..492
e-value: 3.2E-11
score: 44.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 8..158
e-value: 7.0E-15
score: 57.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 113..290
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 119..538
IPR013699Signal recognition particle, SRP72 subunit, RNA-bindingPFAMPF08492SRP72coord: 599..640
e-value: 4.2E-12
score: 46.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 547..700
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 563..600
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 670..688

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1188_length_12866_cov_4.640157contigNODE_1188_length_12866_cov_4.640157:5228..7330 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9303.t1Gcaud9303.t1Gracilaria caudata M_176_S67 malemRNANODE_1188_length_12866_cov_4.640157 5228..7330 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9303.t1 ID=Gcaud9303.t1|Name=Gcaud9303.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=701bp
MPASELQDGAVDELQQLFNRGQYETVLNRVNQFRKRNKKRSPSVSHILDA
ARAFSLIHLGRADEALPSIEALLQTKSPPFKEQLLYAKAYAAWAINERLV
QAMDTTAPMHGQDVQKLKAQLLYRAGRYDDAANLYERLLTQARNTLREKK
EPAATSRWRLPGITARATQVASPVTAAELEQLTSAVNELATNAMASMILA
RTHEKLPSIQDGLRPSYEIEYNAACSHIALEDFENAQACLEKAEALINSE
LDEEDDDIEEATAPLFVQQAYLNHMAGDIEAAKQSYYEVVNGRRCDAASL
AVAANNLTVAIGQLALGKATLSVAQDGTRSLSKQQHEALVEGLKKMKTTA
SRNVIRKLTSHQRQAMGRNRAVLFVQMGRLDACRSEIEMLKVHYPDDALV
RLLEASLQAKKGQLQNADQLLSEAADTPVIRAARVQLAASHGEKERAAEL
LQKLFPDSPAAVRTAASFLEQSNQVQDGIALLKEFVSNASADLKASANRE
LAALLLRNGFYRESAEILRDCIKASRSDPLATAQLAVATSHFDPDEADRI
ASALPGTSLRTTGEDAERLEQLPPPKRKHLSNRTLDASNDAEDKLLTATP
RRDKKKKPKKKKLPKNYDPDGPPPDPERWLPKTLRSGYRKKKVKRDQAPF
RGSQGADAASAEAAAQTLADKASSKASSASTNTLPPRSRPRMQRRKKGRK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026270SRP72
IPR011990TPR-like_helical_dom_sf
IPR013699Signal_recog_part_SRP72_RNA-bd