Gcaud93.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud93.t1
Unique NameGcaud93.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length478
Homology
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BLAST of Gcaud93.t1 vs. uniprot
Match: A0A2V3IYV1_9FLOR (Kelch-like protein 11 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYV1_9FLOR)

HSP 1 Score: 740 bits (1911), Expect = 2.490e-266
Identity = 368/482 (76.35%), Postives = 420/482 (87.14%), Query Frame = 0 
Query:    1 MVVSVLNADPAQANAKSLLDEHLHPFCDVDVVVAHKHFPAHRAVLAVHSLEFRAAFSPG-----ASTRLTSPKRTVTSLSSENAVAPDAKQADEPGHVRQPTRFRVHVALDNVDEEAVHRGWQLVYSYMYGEEVKLNTDSVLAALPICRRYRFDELACLLDAFLCEGAVTEQNCTRVYAAAAVPPSSSLATHRRDSDAQLVLNAAWQVMKCRFVNIVDWGSLPYHALVKLLKLNDLNVSSEALVFDAVQQWVFANLSTIDATHVAGVVKLVRFPTMTQAELELAAASQLVSKFTVCRKYVSRGLAAKSDERRGLIRSVVMESSPVYRRRRTDALTFSDRVAGWHRLENNVSTSSRYFAGCLWNLIIEKDVEWVGVFLGCQSENDEKEMDVELDFSVFMVKHTGANPELVTKQVKGACFGRSGQRIGFRKMIRRQDIEKEGSRLLLRDTLFIGASIRLRCSQLEVIGISEDGDDTVESESSMM 477
            MVVSVLN+DPAQANA+ LL EHLHPFCDVD+V  HKH+PAHRAVLA+HSL+FRAAFS       +ST     +RT TSLS+++A+ P   ++ +    +QPTR+RVH++ D  DE+ + RGWQLVYSY+YGE V L+T+SVLAALPICRRYRF+ELA +LDAFLCEGAVTE+NC RVYAAAAV PSSSL++  RDSD+QLVLN+AWQVMK  F  + DWG LPYHALVKLLKLNDLNV SEA VFDA QQWVF+N S +D   VA V+KL+RFPTMTQ ELELAAAS+LV++F VCRKY+SRGLAAKSDERRGL RSVVMESSPVYR+RRTDALTFSDRVAGWHRLENNV+TSSRYFAGCLWNLIIEKD EW+GVFLGCQSENDEKEMDVELDFSVF+VKHTGA P+L +KQVKGACFGRSGQRIGF++MI+R DIEK+GSRLLLRDTLFIGASIRLRCSQL VIGI+EDGDDT ESESS+M
Sbjct:    1 MVVSVLNSDPAQANARLLLSEHLHPFCDVDIVAGHKHYPAHRAVLAIHSLDFRAAFSKHHLSSHSSTVAPHSRRTQTSLSTDDAITPPGAESTDEPRSKQPTRYRVHISSDETDEDTLRRGWQLVYSYIYGEHVTLDTNSVLAALPICRRYRFEELAAILDAFLCEGAVTEENCARVYAAAAVQPSSSLSSRARDSDSQLVLNSAWQVMKSHFSKVQDWGPLPYHALVKLLKLNDLNVDSEAQVFDAAQQWVFSNFSIVDDALVASVIKLIRFPTMTQNELELAAASRLVTQFAVCRKYISRGLAAKSDERRGLRRSVVMESSPVYRQRRTDALTFSDRVAGWHRLENNVNTSSRYFAGCLWNLIIEKDTEWIGVFLGCQSENDEKEMDVELDFSVFIVKHTGAEPDLYSKQVKGACFGRSGQRIGFKRMIKRADIEKDGSRLLLRDTLFIGASIRLRCSQLPVIGITEDGDDTAESESSLM 482
The following BLAST results are available for this feature:
BLAST of Gcaud93.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYV1_9FLOR2.490e-26676.35Kelch-like protein 11 n=1 Tax=Gracilariopsis chord... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 27..163
e-value: 7.7E-7
score: 38.7
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 25..65
e-value: 1.0E-6
score: 29.0
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 27..133
score: 11.709058
IPR011705BTB/Kelch-associatedSMARTSM00875BACK_2coord: 183..279
e-value: 2.9E-9
score: 46.8
IPR011705BTB/Kelch-associatedPFAMPF07707BACKcoord: 198..277
e-value: 6.5E-10
score: 39.0
IPR002083MATH/TRAF domainPFAMPF00917MATHcoord: 342..450
e-value: 2.6E-7
score: 30.8
IPR002083MATH/TRAF domainCDDcd00121MATHcoord: 334..451
e-value: 8.28719E-10
score: 54.6926
NoneNo IPR availableGENE3D1.25.40.420coord: 199..302
e-value: 2.6E-13
score: 51.7
NoneNo IPR availablePANTHERPTHR24412KELCH PROTEINcoord: 24..293
NoneNo IPR availablePANTHERPTHR24412:SF444SI:DKEY-260J18.2coord: 24..293
NoneNo IPR availableCDDcd18186BTB_POZ_ZBTB_KLHL-likecoord: 26..146
e-value: 3.753E-11
score: 57.1785
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 338..451
IPR008974TRAF-likeGENE3D2.60.210.10Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain Acoord: 322..455
e-value: 3.4E-12
score: 48.4
IPR011333SKP1/BTB/POZ domain superfamilyGENE3D3.30.710.10Potassium Channel Kv1.1; Chain Acoord: 7..187
e-value: 1.5E-15
score: 59.3
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 25..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1591_length_9599_cov_3.497581contigNODE_1591_length_9599_cov_3.497581:7817..9250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud93.t1Gcaud93.t1Gracilaria caudata M_176_S67 malemRNANODE_1591_length_9599_cov_3.497581 7817..9250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud93.t1 ID=Gcaud93.t1|Name=Gcaud93.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=478bp
MVVSVLNADPAQANAKSLLDEHLHPFCDVDVVVAHKHFPAHRAVLAVHSL
EFRAAFSPGASTRLTSPKRTVTSLSSENAVAPDAKQADEPGHVRQPTRFR
VHVALDNVDEEAVHRGWQLVYSYMYGEEVKLNTDSVLAALPICRRYRFDE
LACLLDAFLCEGAVTEQNCTRVYAAAAVPPSSSLATHRRDSDAQLVLNAA
WQVMKCRFVNIVDWGSLPYHALVKLLKLNDLNVSSEALVFDAVQQWVFAN
LSTIDATHVAGVVKLVRFPTMTQAELELAAASQLVSKFTVCRKYVSRGLA
AKSDERRGLIRSVVMESSPVYRRRRTDALTFSDRVAGWHRLENNVSTSSR
YFAGCLWNLIIEKDVEWVGVFLGCQSENDEKEMDVELDFSVFMVKHTGAN
PELVTKQVKGACFGRSGQRIGFRKMIRRQDIEKEGSRLLLRDTLFIGASI
RLRCSQLEVIGISEDGDDTVESESSMM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011705BACK
IPR002083MATH/TRAF_dom
IPR008974TRAF-like
IPR011333SKP1/BTB/POZ_sf