Gcaud9287.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9287.t1
Unique NameGcaud9287.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length631
Homology
BLAST of Gcaud9287.t1 vs. uniprot
Match: A0A2V3ISS3_9FLOR (NOT2_3_5 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISS3_9FLOR)

HSP 1 Score: 730 bits (1884), Expect = 8.710e-257
Identity = 421/676 (62.28%), Postives = 488/676 (72.19%), Query Frame = 0
Query:    1 MSHLYFAYGAENAAGSPPSVHPPHAPHRRSPQAWSADPRRAPAPLPLSQFADLSVSPPQPLAAPXXXXXXXXXXXXXXXSPYDDNLFHVMGKPFADPSQPAPVSSPPPRPAPQQPPFTQPHASSTVFDPSDFPSLGAVGAHAAMQPATSSLLDNNPSIDHNITNASLSAPTLNGIATYQDLYSLGAYADSRVKAVDALTGSSAPSEFSMQSEDFPALGG-PSASASLRPVNASSAIANGA--YQIDSSSMRSSLQKAPLSDSFYDRKLSSVSSQPQSVLARVNVRQDATASRMAQRNARLPNGYTPNEALSSLQLHHASNSHVGSQ-HGFRDLRSSSPRRSGASGASNGPQLFQMRARQAELDRRIEDYEAVVDSRESISRHNLSAPQNSKPIPAAQESRFSRSRMPNGQS---------------NNSQTDSHTMAARNRSSAVNEASTKAQ--------------------------GAFRSDKFGMLSLLPLVCSGGNVSRKDRVLPIGIDLTALGLNLNSHEPLYKTFHTPWEGGQGRAGDGDFVGSSQKGHEPEYRLPTCYYMQAPALRTNHFTKFQLETLFYIFYMMPHDVLQLLAAVELYKRKWKYHKTLKLWFTC-ELDGSSGYEGGYIYFDIKSWGKTEFHEVNDNPSFIKGFMTEEELASVKIPPL 630
            MSHLY+ YGAENAA SPPSV   H  HRRSPQAWSADPRR  A L LSQ ADLS SPPQ L+                 + YDDNLF +MGK F D SQP P  SPP R   Q PP+ Q H  STVFDPSDFPSLG VGAH ++QP++SS+LD N SIDH +TN SLSAPTLNG+  YQDLYSLGAYADSRVKAVDALTGSSAPSEFSMQSEDFPALGG  SAS +LRPVNA  A+ANGA  +QID+SSMR+SL K+ + DSFYDRKLS+VSSQP S+L R NVRQDA  SRM QR  RLPNGY  N+ +S++  HH S SH+  Q H FR + S+SPRRS A+ AS+   LFQ+R RQ +++RR E +E V D RE+ S HNL  P ++       +SR SRSR+PNGQS               N ++  + TM+A    + +  AS +                             AF S+KFGMLSLLPLV + G+ +R+DRVLPIG+DLTALGLNL+S EPLYKTF+ PWEGGQG++GD DF GSSQK  EP++RLPTCYYMQAPALRTNHFTKFQLETLFYIFY+MPHDVL+LLAAVELYKR W+YHKTLKLWFT  EL+ +SGYEGGYIYFDIKSWGK EFHE N   SFIKGFMT+EEL +V+IPPL
Sbjct:    1 MSHLYYTYGAENAASSPPSVQQ-HPAHRRSPQAWSADPRRPSAQLSLSQLADLSSSPPQSLSTALMNSARPVPPSSRPTA-YDDNLFQIMGKGFNDHSQPYPSQSPPLRAPQQAPPYPQAHQPSTVFDPSDFPSLGTVGAHPSIQPSSSSILDTNASIDHTLTNPSLSAPTLNGMPPYQDLYSLGAYADSRVKAVDALTGSSAPSEFSMQSEDFPALGGGASASTALRPVNAQPALANGAAPFQIDTSSMRTSLTKSSVPDSFYDRKLSAVSSQPHSILGRANVRQDA--SRMQQRTTRLPNGYAVNDTMSAMPPHHPSTSHLAQQQHAFRAMSSTSPRRSAATAASHAQPLFQVRTRQLDVERRPEQHEPV-DVREAPSLHNL--PIHNTKATLQPDSRLSRSRLPNGQSSGAVASDILASVVKGNATEDFTATMSASAPITGLAPASAQTSIPTSAPTPPSASIXXXXXXXXXXXXXTAFPSEKFGMLSLLPLVSTSGSNARQDRVLPIGVDLTALGLNLSSTEPLYKTFYNPWEGGQGKSGDLDFSGSSQKNQEPDFRLPTCYYMQAPALRTNHFTKFQLETLFYIFYIMPHDVLELLAAVELYKRNWRYHKTLKLWFTSPELEKNSGYEGGYIYFDIKSWGKREFHEANQ--SFIKGFMTQEELGAVRIPPL 667          
BLAST of Gcaud9287.t1 vs. uniprot
Match: R7QRK3_CHOCR (NOT2_3_5 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRK3_CHOCR)

HSP 1 Score: 270 bits (689), Expect = 6.770e-80
Identity = 206/560 (36.79%), Postives = 275/560 (49.11%), Query Frame = 0
Query:   81 PYDDNLFHVMGKPFADPS----QP-APVSSPPPRPAPQQPPFTQPH-ASSTVFDPSDFPSLGA-VGAHAAMQPATSSLLDNNPSID-HNITNASLSAPTLNGIATYQDLYSLGAYADSRVKAVDALTGSSAPSEFSMQSEDFPALGGPSASASLRPVNASSAIANGAYQIDSSSMRSSLQKAPLSDSFYDRKLSSVSSQPQSVLARVNVRQDATASRMAQRNARLPNGYTPNEALSSLQLHHASNSHVGSQHGFRDLRSSSPRRSGASGASNGPQLFQMRARQAELDRRIEDYEAVVDSRESISRHNLSAPQNSKPIPAAQESRFSRSRMPNGQSNNSQTDSHTMAARNRSSAVNEASTKAQGAFRSDKFGMLSLLPLVCSGGNVSRKD-RVLPIGIDLTALGLNLNSHEPLYKTFHTPWEGGQGRAGDGDFVGSSQKGHEPEYRLPTCYYMQAPALRTNHFTKFQLETLFYIFYMMPHDVLQLLAAVELYKRKWKYHKTLKLWFTCELDGSSGYE-GGYIYFDIKSWGKTEFHEVNDNPSFIKGFMTEEELASVKIPPL 630
            PY+D+LF +MGK FAD S    QP +   S PP  A     +++   ASS VFDPS+FPSLG  +G    M    ++LL ++  +D   +T+  +  P++NG+  + D+Y++  Y D R KAVDA+TG++  SEFSMQSEDFPALGG      +RP +  S   NG   + S  M  +   AP                            DA           +  G+     L+ + +           HG  D           +G  NG  +                  A + +  + S+    AP  S  I    +                     T AA         AS K   A   D++GM  LL  V  G      D  +L +G+DLT LGL+L S  PLYK+F +PWEGGQ      D  G  Q+  EPE++LPTCYYMQ PAL+ +HF KFQL T+FY+FY MP D+LQ+LAA+ELY RKW YHK LKLWFT E D    Y+   Y+YFDIKSWG+  FH+ N   SFI+G MTE+E+ SV +P L
Sbjct:   16 PYEDSLFQMMGKGFADKSARSAQPNSSTQSLPPSHAATLDQYSKIRSASSNVFDPSEFPSLGGGLGGPGPMSLNPAALLTSSTPLDVPALTSVGMPGPSVNGLGPFTDMYNIAGYGDVRAKAVDAVTGTAGSSEFSMQSEDFPALGGKPGPGGMRPPSMMSTAPNGPTLLPS--MARAHPAAP----------------------------DA-----------IRQGHNDMAELTGVDIR------TKGIHGLSD-----------AGIPNGDAVPV----------------ATLQTTNAGSKPEPEAPLVSDSIGIGADG--------------------TKAA---------ASPKVLAA---DQYGMKGLLKFV--GSRAEGTDMNMLSVGVDLTLLGLDLTSPGPLYKSFSSPWEGGQVGTRGSDKTGVPQRNEEPEFKLPTCYYMQPPALKNSHFAKFQLGTVFYVFYNMPRDILQVLAAIELYNRKWMYHKDLKLWFTNEPDVLESYDRAAYVYFDIKSWGERPFHDANQ--SFIQGLMTEDEVRSVPLPGL 465          
BLAST of Gcaud9287.t1 vs. uniprot
Match: A0A8J5XV45_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XV45_DIALT)

HSP 1 Score: 166 bits (421), Expect = 3.120e-41
Identity = 88/167 (52.69%), Postives = 107/167 (64.07%), Query Frame = 0
Query:  440 DKFGMLSLLPLVCSGGNVSRKD-RVLPIGIDLTALGLNLNSHEPLYKTFHTPWEGGQGRAGDGDFVGSSQKGHEPEYRLPTCYYMQAPALRTNHFTKFQLETLFYIFYMMPHDVLQLLAAVELYKRKWKYHKTLKLWFTCE--LDGSSGYEGGYIYFDIKSWGKTEF 603
            + +G+L LL ++     V+  D   L +G DLT LGLNLNS +PLY TF +PW  G  R+             EPEY LP CYYMQ PAL+T+HF KFQLETLFYIFY MP D LQ  AA ELY R+W+YHK LKLWFT      G+   +GGY++FDI +WGK  F
Sbjct:  316 EPYGLLGLLHVI----RVTDADLNYLALGTDLTTLGLNLNSPDPLYGTFASPWADGPVRS-------------EPEYSLPQCYYMQPPALKTSHFGKFQLETLFYIFYNMPRDTLQAYAATELYNREWRYHKDLKLWFTRTGAQPGADDGKGGYVFFDINTWGKKTF 465          
BLAST of Gcaud9287.t1 vs. uniprot
Match: A0A7S2IE73_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IE73_9EUKA)

HSP 1 Score: 157 bits (398), Expect = 3.420e-41
Identity = 84/167 (50.30%), Postives = 101/167 (60.48%), Query Frame = 0
Query:  440 DKFGMLSLLPLVCSGGNVSRKD-RVLPIGIDLTALGLNLNSHEPLYKTFHTPWEGGQGRAGDGDFVGSSQKGHEPEYRLPTCYYMQAPALRTNHFTKFQLETLFYIFYMMPHDVLQLLAAVELYKRKWKYHKTLKLWFT--CELDGSSGYEGGYIYFDIKSWGKTEF 603
            D+FG++ LL ++     ++ +D   L +G DLT LGLNLNS E LY TF +PW               S    +PE+ LP CYYMQ PAL+T HF+KFQLETLFYIFY MP D LQ  AA ELY R W+YHK LKLWFT       +   +G YIYFDI  W K  F
Sbjct:   18 DRFGLMGLLSVI----RMTDQDLNTLALGTDLTTLGLNLNSSECLYATFASPWA-------------DSPAQRDPEFSLPQCYYMQPPALKTGHFSKFQLETLFYIFYNMPRDTLQAYAATELYNRDWRYHKDLKLWFTKAARQGAADTQKGQYIYFDINEWKKKIF 167          
BLAST of Gcaud9287.t1 vs. uniprot
Match: A0A7S0C8Q4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C8Q4_9STRA)

HSP 1 Score: 161 bits (407), Expect = 6.240e-41
Identity = 94/203 (46.31%), Postives = 120/203 (59.11%), Query Frame = 0
Query:  429 ASTKAQGAFRSDKFGMLSLLPLVCSGGNVSRKDR-VLPIGIDLTALGLNLNSHEPLYKTFHTPWEGGQGRAGDGDFVGSSQKGHEPEYRLPTCYYMQAPALRTNHFTKFQLETLFYIFYMMPHDVLQLLAAVELYKRKWKYHKTLKLWF--TCELDGSSGYEGGYIYFDIKSWGKTEFHEVNDNPSFIKGFMTEEELASVKIP 628
            ++T   G   S  +G+L LL ++     +S  DR  L +G DLT LGLNLNS E LY TF +PW               S    EP+Y+LP CYYMQ PAL+T H +KFQLETLFYIFY +P DVLQ  AA ELY R W+YH  LKLWF     +D  +     YIYFDI SW +  F+  + + +F  GF++EE++  VK P
Sbjct:  135 STTSTGGGVLSGDYGLLGLLGVI----RMSDADRNALALGSDLTLLGLNLNSSEHLYSTFASPWS-------------DSPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQAYAAQELYSRDWRYHVDLKLWFKRASPVDVPNANGTQYIYFDINSWERRIFNG-SMHQNFPNGFLSEEDVR-VKFP 318          
BLAST of Gcaud9287.t1 vs. uniprot
Match: A0A7S3EJ41_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJ41_9RHOD)

HSP 1 Score: 160 bits (406), Expect = 7.220e-41
Identity = 90/188 (47.87%), Postives = 124/188 (65.96%), Query Frame = 0
Query:  440 DKFGMLSLLPLVCSGGNVSRKD-RVLPIGIDLTALGLNLNSHEP-LYKTFHTPWEGGQGRAGDGDFVGSSQKGHEPEYRLPTCYYMQAPALRTNHFTKFQLETLFYIFYMMPHDVLQLLAAVELYKRKWKYHKTLKLWFTCELDGSSGYE-GGYIYFDIKSWGKTEFHEVNDNPSFIKGFMTEEELAS 624
            D +GM   L ++      S  D  +L +GIDL  LGLNLNS EP L+++F +P+       GD     +SQKG +PEY++P+CY+ Q   ++ +HF+K QLETLFYIFY MP DVLQ  A++ELY+R+W+YHK LKLWFT        YE G YIYFDI  W +  FH+ N   SF++GF+T+EE+++
Sbjct:  140 DAYGMKGFLKVMAP----SNPDVALLSLGIDLRTLGLNLNSPEPHLHESFKSPF-------GDRS---ASQKG-DPEYQIPSCYFTQPNQMQASHFSKLQLETLFYIFYSMPQDVLQTYASLELYEREWRYHKDLKLWFTRVPGTPMSYERGSYIYFDITDWERRPFHDANR--SFVQGFLTQEEISN 310          
BLAST of Gcaud9287.t1 vs. uniprot
Match: A0A7S3A218_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A218_9RHOD)

HSP 1 Score: 160 bits (406), Expect = 6.230e-40
Identity = 90/188 (47.87%), Postives = 124/188 (65.96%), Query Frame = 0
Query:  440 DKFGMLSLLPLVCSGGNVSRKD-RVLPIGIDLTALGLNLNSHEP-LYKTFHTPWEGGQGRAGDGDFVGSSQKGHEPEYRLPTCYYMQAPALRTNHFTKFQLETLFYIFYMMPHDVLQLLAAVELYKRKWKYHKTLKLWFTCELDGSSGYE-GGYIYFDIKSWGKTEFHEVNDNPSFIKGFMTEEELAS 624
            D +GM   L ++      S  D  +L +GIDL  LGLNLNS EP L+++F +P+       GD     +SQKG +PEY++P+CY+ Q   ++ +HF+K QLETLFYIFY MP DVLQ  A++ELY+R+W+YHK LKLWFT        YE G YIYFDI  W +  FH+ N   SF++GF+T+EE+++
Sbjct:  233 DAYGMKGFLKVMAP----SNPDVALLSLGIDLRTLGLNLNSPEPHLHESFKSPF-------GDRS---ASQKG-DPEYQIPSCYFTQPNQMQASHFSKLQLETLFYIFYSMPQDVLQTYASLELYEREWRYHKDLKLWFTRVPGTPMSYERGSYIYFDITDWERRPFHDANR--SFVQGFLTQEEISN 403          
BLAST of Gcaud9287.t1 vs. uniprot
Match: A0A7S2YKN9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YKN9_9STRA)

HSP 1 Score: 154 bits (388), Expect = 7.840e-40
Identity = 86/198 (43.43%), Postives = 116/198 (58.59%), Query Frame = 0
Query:  433 AQGAFRSDKFGMLSLLPLVCSGGNVSRKDR-VLPIGIDLTALGLNLNSHEPLYKTFHTPWEGGQGRAGDGDFVGSSQKGHEPEYRLPTCYYMQAPALRTNHFTKFQLETLFYIFYMMPHDVLQLLAAVELYKRKWKYHKTLKLWFT-------CELDGSSGYEGGYIYFDIKSWGKTEFHEVNDNPSFIKGFMTEEEL 622
            A  A + D +G+L LL ++     ++  DR  L +G DLT LGLNL S E +Y TF +PW              S+Q   +P Y+LP+CYYMQ PAL+T H +KFQLETLFYIFY +P DVLQ  +A ELY R+W+YH  LKLWF             ++   G Y+YFDI +W +  F+  N N +   GF+ EE++
Sbjct:    1 AGSALQGD-YGLLGLLGVI----RMTDADRNALALGTDLTMLGLNLGSAEHIYSTFSSPWSS----------TDSTQPTKDPHYQLPSCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQAYSAQELYSREWRYHGELKLWFKRAGPSDGLAASSAASAAGQYLYFDINTWERRLFNG-NMNQTMTNGFLPEEDI 182          
BLAST of Gcaud9287.t1 vs. uniprot
Match: A0A7S2EBZ5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBZ5_TRICV)

HSP 1 Score: 160 bits (406), Expect = 1.120e-39
Identity = 93/200 (46.50%), Postives = 115/200 (57.50%), Query Frame = 0
Query:  435 GAFRSDKFGMLSLLPLVCSGGNVSRKDR-VLPIGIDLTALGLNLNSHEPLYKTFHTPWEGGQGRAGDGDFVGSSQKGHEPEYRLPTCYYMQAPALRTNHFTKFQLETLFYIFYMMPHDVLQLLAAVELYKRKWKYHKTLKLWF--TCELDGSSGYEGG---YIYFDIKSWGKTEFHEVNDNPSFIKGFMTEEELASVKIP 628
            GA  S  FG+L LL ++     ++  DR  L +G DLTALG+NLNS + LY TF +PW               S    EP+Y+LP CYYMQ PAL+T H +KFQLETLFYIFY +P DVLQ  AA ELY R+W+YH  LKLWF      DG +    G   YIYFD+ +W +  F   N N   I G +  E+   VK P
Sbjct:  254 GAALSSDFGLLGLLSVI----RMTDADRNALALGSDLTALGMNLNSSDKLYSTFASPWS-------------ESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPRDVLQAYAAQELYSREWRYHVDLKLWFKRAGPSDGLTATANGGNQYIYFDVNTWERRLF---NGNVQTITGGLLSEDDVRVKFP 433          
BLAST of Gcaud9287.t1 vs. uniprot
Match: R1DJ08_EMIHU (NOT2_3_5 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DJ08_EMIHU)

HSP 1 Score: 156 bits (394), Expect = 6.970e-39
Identity = 83/179 (46.37%), Postives = 107/179 (59.78%), Query Frame = 0
Query:  439 SDKFGMLSLLPLVCSGGNVSRKD-RVLPIGIDLTALGLNLNSHEPLYKTFHTPWEGGQGRAGDGDFVGSSQKGHEPEYRLPTCYYMQAPALRTNHFTKFQLETLFYIFYMMPHDVLQLLAAVELYKRKWKYHKTLKLWFTC----ELDGSSGYEGGYIYFDIKSWGKTEFHEVNDNPSF 612
            +D+FG++ +L ++     ++  D   L +G DLT+LGLNLNS + LY TF +PW     +              EPE+ LP CYYMQ PAL+T HF+KFQLETLFYIFY MP D LQ  AA ELY R W+YHK L LWFT     E  G +G +G Y+ FDI  W K + +    + SF
Sbjct:  136 TDRFGLMGILSVI----RMTEPDLNTLALGTDLTSLGLNLNSADSLYATFASPWADAPAQ-------------REPEFTLPQCYYMQPPALKTGHFSKFQLETLFYIFYNMPRDTLQAYAATELYNRDWRYHKDLTLWFTRASRQEGGGEAGQKGQYLGFDIHEWRKNKKYRPRPSSSF 297          
The following BLAST results are available for this feature:
BLAST of Gcaud9287.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISS3_9FLOR8.710e-25762.28NOT2_3_5 domain-containing protein n=1 Tax=Gracila... [more]
R7QRK3_CHOCR6.770e-8036.79NOT2_3_5 domain-containing protein n=1 Tax=Chondru... [more]
A0A8J5XV45_DIALT3.120e-4152.69Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S2IE73_9EUKA3.420e-4150.30Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S0C8Q4_9STRA6.240e-4146.31Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S3EJ41_9RHOD7.220e-4147.87Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A218_9RHOD6.230e-4047.87Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S2YKN9_9STRA7.840e-4043.43Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2EBZ5_TRICV1.120e-3946.50Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
R1DJ08_EMIHU6.970e-3946.37NOT2_3_5 domain-containing protein n=1 Tax=Emilian... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007282NOT2/NOT3/NOT5, C-terminalPFAMPF04153NOT2_3_5coord: 511..602
e-value: 2.4E-23
score: 82.6
IPR038635CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamilyGENE3D2.30.30.1020coord: 435..614
e-value: 4.8E-46
score: 158.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..131
NoneNo IPR availablePANTHERPTHR23326:SF3CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 2coord: 119..602
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 541..562
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..540
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 563..630
IPR040168Not2/Not3/Not5PANTHERPTHR23326CCR4 NOT-RELATEDcoord: 119..602

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_590_length_21324_cov_3.967503contigNODE_590_length_21324_cov_3.967503:9899..11791 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9287.t1Gcaud9287.t1Gracilaria caudata M_176_S67 malemRNANODE_590_length_21324_cov_3.967503 9899..11791 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9287.t1 ID=Gcaud9287.t1|Name=Gcaud9287.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=631bp
MSHLYFAYGAENAAGSPPSVHPPHAPHRRSPQAWSADPRRAPAPLPLSQF
ADLSVSPPQPLAAPPAMSSARPVPPSSRPSPYDDNLFHVMGKPFADPSQP
APVSSPPPRPAPQQPPFTQPHASSTVFDPSDFPSLGAVGAHAAMQPATSS
LLDNNPSIDHNITNASLSAPTLNGIATYQDLYSLGAYADSRVKAVDALTG
SSAPSEFSMQSEDFPALGGPSASASLRPVNASSAIANGAYQIDSSSMRSS
LQKAPLSDSFYDRKLSSVSSQPQSVLARVNVRQDATASRMAQRNARLPNG
YTPNEALSSLQLHHASNSHVGSQHGFRDLRSSSPRRSGASGASNGPQLFQ
MRARQAELDRRIEDYEAVVDSRESISRHNLSAPQNSKPIPAAQESRFSRS
RMPNGQSNNSQTDSHTMAARNRSSAVNEASTKAQGAFRSDKFGMLSLLPL
VCSGGNVSRKDRVLPIGIDLTALGLNLNSHEPLYKTFHTPWEGGQGRAGD
GDFVGSSQKGHEPEYRLPTCYYMQAPALRTNHFTKFQLETLFYIFYMMPH
DVLQLLAAVELYKRKWKYHKTLKLWFTCELDGSSGYEGGYIYFDIKSWGK
TEFHEVNDNPSFIKGFMTEEELASVKIPPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007282NOT2/3/5_C
IPR038635CCR4-NOT_su2/3/5_N_sf
IPR040168Not2/3/5