Gcaud9282.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud9282.t1
Unique Name	Gcaud9282.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	270

Homology

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BLAST of Gcaud9282.t1 vs. uniprot
Match: A0A2V3IEV0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV0_9FLOR)

HSP 1 Score: 110 bits (276), Expect = 5.290e-25
Identity = 55/141 (39.01%), Postives = 85/141 (60.28%), Query Frame = 0

Query:  124 YSGKPEERTSIRIRRFTAGLRRMMRISGVDDPQEMVDVAKCFLKGSASTWINREEAQGVAILSLDGLEKALIDEYVPDNEDAQARSKLMRLRLRGNLERHISQFRDLIELCGPHPGDAYNYFFMSLSDEYRAELAKKFPKG 264
            Y GK  ER S ++R F + +R +  +      +E VD+A C L+  A  W NR    G    SL+ L+ A+I E+VP NE A AR  L++LR+ G LE HIS+FR+L ++CG    +++ YF +SL   +R +L++++P G
Sbjct:  165 YCGKDHERNSTKVRSFISSIRIVSNLCRGLTAREEVDIAVCLLRDHADLWYNRVTLTGEHFASLEQLQAAMIQEFVPANEHANARLSLIKLRMNGPLEPHISKFRELTDICGTPIIESFTYFQLSLPTLFRKKLSERYPSG 305

The following BLAST results are available for this feature:

BLAST of Gcaud9282.t1 vs. uniprot

BLAST of Gcaud9282.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IEV0_9FLOR	5.290e-25	39.01	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_3901_length_2807_cov_6.620398	contig	NODE_3901_length_2807_cov_6.620398:1495..2304 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud9282.t1	Gcaud9282.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_3901_length_2807_cov_6.620398 1495..2304 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud9282.t1 ID=Gcaud9282.t1|Name=Gcaud9282.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=270bp
MIQTKMKHDAEVNRSHQKNADDMRSFLQSLLEIVEQLKSNNTSPPNQGPN
LERVESLALPAIDALRSAPQSPPTPSESSHSVASSQALSSISLLPPTAPL
VPASRRRTGPSLASLTKHAAPESYSGKPEERTSIRIRRFTAGLRRMMRIS
GVDDPQEMVDVAKCFLKGSASTWINREEAQGVAILSLDGLEKALIDEYVP
DNEDAQARSKLMRLRLRGNLERHISQFRDLIELCGPHPGDAYNYFFMSLS
DEYRAELAKKFPKGSTDLKA