Gcaud9281.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9281.t1
Unique NameGcaud9281.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length337
Homology
BLAST of Gcaud9281.t1 vs. uniprot
Match: A0A2V3J2J0_9FLOR (Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2J0_9FLOR)

HSP 1 Score: 360 bits (924), Expect = 3.630e-120
Identity = 215/366 (58.74%), Postives = 254/366 (69.40%), Query Frame = 0
Query:    1 LARIPNGDAWNRNGSGIECRYLGHTNCFPGAARNPFGLDFKAAGLKWTTELCEKDSDGDGVTNGEELGDPCCQWTPEKPIQLRLTMLSHPGVAERSGAMDAARCEAQTQLSPTAVPPENASPSXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------APSATPEEDD-----------------DNVCFPAHALVELQDGSVRRMDQISIGDMVRVGDRKYSAVFMFTHQQQGVQYPFVALQTENVEQSLMLTAGHFLYANGRCVQAAAVRQGDYLHMADGSTSKVLNVSVHIAHGLYNPQTIHGDLVVDGVRVTTYTSSVEKFTAHSLLAPLRALYQACA---FCAPLFKYAPEHVRSTL 335
            L RIPNGDAW+R+GSGI+C YLGHT C  G ARN FGLDF +AG +WT +LCE DSD DGV+NG+ELGDPCC+W P+ PI+LRL MLSHPGV E+ GA +A  C+      P           XXXXXXXXXXXXXXXXXXXXXXXXXXXX           A S+   EDD                 DNVCFPAHA V L+DGSVRRMDQ+ IGD V VG+  YS +FMFTHQ   ++YPFV +QT+  + SL LT+GHF+YAN   V+A+AVR GDY+ + DGS S V  VS HI++GLYNPQT+HGDL+V+GVRVTTYTS++    AHSLL PLRA YQ CA    CA LF++ P  VRS L
Sbjct:   22 LQRIPNGDAWDRDGSGIKCIYLGHTGCEQGTARNQFGLDFDSAGRQWTKQLCEMDSDNDGVSNGQELGDPCCEWAPDNPIELRLQMLSHPGVPEQDGAREAPTCQRDADAPPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASPSAQSSPTGEDDAAGXXXXXXXXXXXXXXDNVCFPAHAQVRLEDGSVRRMDQLQIGDRVHVGNGIYSPIFMFTHQHARIRYPFVIIQTDK-QHSLTLTSGHFMYANDASVRASAVRVGDYVQLEDGSKSLVTAVSKHISNGLYNPQTLHGDLIVNGVRVTTYTSAIHLTLAHSLLTPLRAFYQTCATVGMCASLFEFVPLQVRSML 386          
BLAST of Gcaud9281.t1 vs. uniprot
Match: R7Q619_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q619_CHOCR)

HSP 1 Score: 186 bits (473), Expect = 4.240e-54
Identity = 86/159 (54.09%), Postives = 118/159 (74.21%), Query Frame = 0
Query:  158 EEDDDNVCFPAHALVELQDGSVRRMDQISIGDMVRVGDRKYSAVFMFTHQQQGVQYPFVALQTENVEQSLMLTAGHFLYANGRCVQAAAVRQGDYLHMADGSTSKVLNVSVHIAHGLYNPQTIHGDLVVDGVRVTTYTSSVEKFTAHSLLAPLRALYQA 316
            E+DDD+VCFPA+ALVEL++G+ + M Q+ +GD VRVG   +S VFMFTH+   ++Y FV L T++   +L LT GH+LY NG    A  VR GD++ +ADG+TS V  V   IA GLYNPQT+HGD++V+G+  TTYT++VE+  AH+LLAPLRA+Y +
Sbjct:   62 EDDDDSVCFPANALVELENGATKMMSQVQLGDRVRVGPNDFSDVFMFTHKTAAIKYSFVTLATQS-GHTLSLTKGHYLYVNGVVAAAKTVRSGDFITLADGTTSSVTQVGTEIARGLYNPQTVHGDIIVNGLLATTYTTTVERSMAHALLAPLRAVYSS 219          
BLAST of Gcaud9281.t1 vs. uniprot
Match: A0A2V3IX71_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX71_9FLOR)

HSP 1 Score: 171 bits (433), Expect = 1.260e-45
Identity = 84/182 (46.15%), Postives = 119/182 (65.38%), Query Frame = 0
Query:  152 APSATPEEDDDNVCFPAHALVELQDGSVRRMDQISIGDMVRVGDRKYSAVFMFTHQQQGVQYPFVALQTENVEQSLMLTAGHFLYANGRCVQAAAVRQGDYLHMADGSTSKVLNVSVHIAHGLYNPQTIHGDLVVDGVRVTTYTSSVEKFTAHSLLAPLRALYQACAFCAPLFKYAPEHVRS 333
            A S +P++DDD VCFPA A V+L+DGS ++M  + +GD V V    +S VFMFTH+   V+Y FV +QT +   +L LT GH+LY NG    A+ V+ GD L +AD S + V  VS   + GL+NPQT+HGD+VV+G++ +TYT++VE   AH+LL+PLRA Y    F    F+   + + S
Sbjct:  297 AASPSPDDDDDAVCFPADATVQLEDGSAKKMGDVQLGDRVMVDHGIFSPVFMFTHKLSTVRYGFVNIQTSS-GNTLSLTPGHYLYVNGHLSAASTVKNGDTLMLADSSLTDVTQVSTVTSTGLFNPQTLHGDIVVNGLKASTYTTAVEPGLAHALLSPLRAAYSRLGFSLRAFEAGADRIAS 477          
BLAST of Gcaud9281.t1 vs. uniprot
Match: A0A2V3IFE6_9FLOR (Sonic hedgehog protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE6_9FLOR)

HSP 1 Score: 161 bits (408), Expect = 1.380e-42
Identity = 82/171 (47.95%), Postives = 110/171 (64.33%), Query Frame = 0
Query:  155 ATPEEDDDNVCFPAHALVELQDGSVRRMDQISIGDMVRVGDRKYSAVFMFTHQQQGVQYPFVALQTENVEQSLMLTAGHFLYANGRCVQAAAVRQGDYLHMADGSTSKVLNVSVHIAHGLYNPQTIHGDLVVDGVRVTTYTSSVEKFTAHSLLAPLRALYQACAFCAPLFK 325
            AT E+DD + CFPA   VEL+DGSV+ M Q++IGD VRVG   +S VFMFTH+ Q  +  FV ++T++    + LT GH+L+ NG    A  V+ GD + +A G T+ V  V      GLYNPQTI GD+VV+G+R +TYT++V+   AH LL P RALYQA       F+
Sbjct:  231 ATAEDDDGSTCFPADTTVELEDGSVKEMAQVNIGDRVRVGRSMFSEVFMFTHRLQDGENYFVKIETDS--SGISLTKGHYLFVNGVLAAAKTVQVGDLVELASGETATVRAVKKVKGTGLYNPQTISGDIVVNGIRASTYTTTVDPAFAHRLLTPFRALYQAFGVATSAFE 399          
BLAST of Gcaud9281.t1 vs. uniprot
Match: A0A2V3IGP9_9FLOR (Warthog protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGP9_9FLOR)

HSP 1 Score: 161 bits (408), Expect = 4.690e-42
Identity = 82/177 (46.33%), Postives = 113/177 (63.84%), Query Frame = 0
Query:  159 EDDDNVCFPAHALVELQDGSVRRMDQISIGDMVRVGDRKYSAVFMFTHQQQGVQYPFVALQTENVEQSLMLTAGHFLYANGRCVQAAAVRQGDYLHMADGSTSKVLNVSVHIAHGLYNPQTIHGDLVVDGVRVTTYTSSVEKFTAHSLLAPLRALYQACAFCAPLFKYAPEHVRSTL 335
            EDD + CFPAHA VEL+DGS + MD I +GD V+V   ++S VFMFTH+  G+ Y FV L T +   SL LT GH+LY NG    A +V  GD +   D     V  V+  ++ GLYNPQT++G++VV+GVR +TYT++VE  TAHSLL PLRA+++     + +     + + S L
Sbjct:  300 EDDGSACFPAHATVELEDGSFKTMDSIELGDRVKVASGEFSPVFMFTHKMAGISYSFVRL-TASSGHSLELTKGHYLYVNGDLAAAESVHVGDSIE-TDAGVVSVSAVARVVSRGLYNPQTVNGNIVVNGVRASTYTTAVEIKTAHSLLLPLRAVFRLAGMTSAMLDNGSDKLASML 474          
BLAST of Gcaud9281.t1 vs. uniprot
Match: A0A1X6NXN0_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXN0_PORUM)

HSP 1 Score: 157 bits (398), Expect = 1.150e-39
Identity = 84/184 (45.65%), Postives = 114/184 (61.96%), Query Frame = 0
Query:  154 SATPEEDDDNVCFPAHALVELQDGSVRRMDQISIGDMVRVGDRKYSAVFMFTHQQQGVQYPFVALQTENVEQSLMLTAGHFLYANGRCVQAAAVRQGDYLH-MADGSTSKVLNVSVHIAH-GLYNPQTIHGDLVVDGVRVTTYTSSVEKFTAHSLLAPLRALYQACAFCAPLFKYAPEHVRSTL 335
            S  P ++DD+VCFPA A VEL DG    M  +++GD VRV    YS VF+FTH+ +G + PFV L T     SL  TAGH++YANGR   A AVR GD L  + D +T  V+  +  +A  GLYNPQT+HGD+VV+G+R +TYT ++E   A +LLAPLRAL++             + + + L
Sbjct:  469 SPPPLDEDDSVCFPADATVELADGRTVPMADVALGDHVRVSATAYSPVFLFTHRVRGGRRPFVRLTTA-AGASLTATAGHYVYANGRLTAAGAVRVGDRLETVGDAATCTVVTATARVAGTGLYNPQTLHGDIVVNGIRASTYTMAIEPAVASTLLAPLRALFRLAGLTTTALDGGADRLAALL 651          
BLAST of Gcaud9281.t1 vs. uniprot
Match: A0A2V3IKI5_9FLOR (Tyramine beta-hydroxylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKI5_9FLOR)

HSP 1 Score: 158 bits (400), Expect = 1.480e-39
Identity = 79/158 (50.00%), Postives = 104/158 (65.82%), Query Frame = 0
Query:  164 VCFPAHALVELQDGSVRRMDQISIGDMVRVGDRKYSAVFMFTHQQQGVQYPFVALQTENVEQSLMLTAGHFLYANGRCVQAAAVRQGDYLHMADGSTSKVLNVSVHIAHGLYNPQTIHGDLVVDGVRVTTYTSSVEKFTAHSLLAPLRALYQACAFCA 321
            VCFPA A VEL+DGS +RMD++ IGD + VG  +YS VF+FTH+   V Y FV L T +   ++ LT+GHFLY NG+   A + R+GD + +  G T  V  VS  +  GL+NPQTIHG++VVDGV  +TYT ++    AH LLAPLR LY+     A
Sbjct:  661 VCFPASASVELRDGSRKRMDELQIGDSILVGPGEYSEVFLFTHRTSRVLYRFVQLTTSS-GATVKLTSGHFLYLNGKLAMAGSAREGDEVTVGSGETEMVTKVSTVVDKGLFNPQTIHGNIVVDGVVSSTYTHTIAPMMAHGLLAPLRVLYRCLGMLA 817          
BLAST of Gcaud9281.t1 vs. uniprot
Match: UPI001E1DDBBD (warthog protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDBBD)

HSP 1 Score: 148 bits (373), Expect = 1.630e-38
Identity = 72/182 (39.56%), Postives = 114/182 (62.64%), Query Frame = 0
Query:  154 SATPEEDDDNVCFPAHALVELQDGSVRRMDQISIGDMVRVGDRKYSAVFMFTHQQQGVQYPFVALQTENVEQSLMLTAGHFLYANGRCVQAAAVRQGDYLHMADGSTSKVLNVSVHIAHGLYNPQTIHGDLVVDGVRVTTYTSSVEKFTAHSLLAPLRALYQACAFCAPLFKYAPEHVRSTL 335
            S +P   + + CFP  A+VEL+ G+ +RMD++ IGD V+VG  ++S VFMFTH+     Y FV + T +   S+ LT GH+++ NG    A+ V  GD L +  G  ++V +V+   + G+YNPQT+HGD+VV G+RV+TYT++VE   AH+ L  +R++Y+       +F+   + + S L
Sbjct:  121 SPSPSAVNGSSCFPGSAMVELESGARQRMDKMKIGDRVKVGRAEFSEVFMFTHKTHTGIYDFVKITTSS-GHSVSLTGGHYIHVNGGLAAASVVAVGDMLQLGTGEATEVTDVTCVQSKGIYNPQTLHGDIVVGGIRVSTYTTAVEPRLAHAGLGAIRSMYRIFGLTFSMFEQGADSIASFL 301          
BLAST of Gcaud9281.t1 vs. uniprot
Match: A0A2V3IFE9_9FLOR (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE9_9FLOR)

HSP 1 Score: 152 bits (385), Expect = 2.110e-38
Identity = 76/158 (48.10%), Postives = 113/158 (71.52%), Query Frame = 0
Query:  162 DNVCFPAHALVELQDGSVRRMDQISIGDMVRVGDRKYSAVFMFTHQQQGVQYPFVALQTENVEQSLMLTAGHFLYANGRCVQAAAVRQGDYLHMADGSTSKVLNVSVHIAHGLYNPQTIHGDLVVDGVRVTTYTSSVEKFTAHSLLAPLRALYQACAF 319
            +++CFP+ A VE+ DGS +RMD++ IGD +RVGD+ +S VF+FTH Q+     FV ++TE+  + L LTAGH LYANG    A  V+  D+L + DG T +V+ VS  +  GL+NPQT+HGD+VV+G+  +TYT++V+ + AH++LAPLRA++    F
Sbjct:  355 ESLCFPSDATVEMIDGSSKRMDELVIGDEIRVGDQ-FSPVFLFTHNQKETLRSFVQIETES-HRKLALTAGHMLYANGILKAAMHVKTDDHLRVVDG-TDRVVRVSKVVKKGLFNPQTMHGDIVVNGLVTSTYTTAVDAYMAHTVLAPLRAMWNLVGF 509          
BLAST of Gcaud9281.t1 vs. uniprot
Match: A0A2V3IKL0_9FLOR (DBH-like monooxygenase protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKL0_9FLOR)

HSP 1 Score: 154 bits (390), Expect = 3.300e-38
Identity = 77/152 (50.66%), Postives = 103/152 (67.76%), Query Frame = 0
Query:  164 VCFPAHALVELQDGSVRRMDQISIGDMVRVGDRKYSAVFMFTHQQQGVQYPFVALQTENVEQSLMLTAGHFLYANGRCVQAAAVRQGDYLHMADGSTSKVLNVSVHIAHGLYNPQTIHGDLVVDGVRVTTYTSSVEKFTAHSLLAPLRALYQ 315
            VCFPA A VEL+DGS +RMD++ IGD + VG  +YS VF+FTH+   V Y FV L T +   ++ LT+GHFLY NG+   A + R+GD + +  G T  V  VS  +  GL+NPQTIHG++VVDGV  +TYT ++    AH LLAPLR L++
Sbjct:  665 VCFPASASVELRDGSRKRMDELQIGDSILVGPGEYSEVFLFTHRTSRVLYRFVQLTTSS-GATVKLTSGHFLYLNGKLAMAGSAREGDEVTVGSGETEMVTKVSTVVDKGLFNPQTIHGNIVVDGVVSSTYTHTIAPMMAHGLLAPLRWLHK 815          
The following BLAST results are available for this feature:
BLAST of Gcaud9281.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2J0_9FLOR3.630e-12058.74Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386... [more]
R7Q619_CHOCR4.240e-5454.09HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IX71_9FLOR1.260e-4546.15Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A2V3IFE6_9FLOR1.380e-4247.95Sonic hedgehog protein n=1 Tax=Gracilariopsis chor... [more]
A0A2V3IGP9_9FLOR4.690e-4246.33Warthog protein 6 n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A1X6NXN0_PORUM1.150e-3945.65HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A2V3IKI5_9FLOR1.480e-3950.00Tyramine beta-hydroxylase n=1 Tax=Gracilariopsis c... [more]
UPI001E1DDBBD1.630e-3839.56warthog protein 6-like n=1 Tax=Mercenaria mercenar... [more]
A0A2V3IFE9_9FLOR2.110e-3848.10Desert hedgehog protein A n=1 Tax=Gracilariopsis c... [more]
A0A2V3IKL0_9FLOR3.300e-3850.66DBH-like monooxygenase protein 1 n=1 Tax=Gracilari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 163..257
e-value: 0.0041
score: 26.1
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 165..295
e-value: 2.3E-30
score: 107.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..167
NoneNo IPR availablePANTHERPTHR34737FAMILY NOT NAMEDcoord: 2..158
NoneNo IPR availableCDDcd00081Hintcoord: 165..289
e-value: 7.23439E-8
score: 48.8046
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 163..317
e-value: 4.0E-27
score: 95.1
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 165..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2798_length_4671_cov_3.073144contigNODE_2798_length_4671_cov_3.073144:2604..3614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9281.t1Gcaud9281.t1Gracilaria caudata M_176_S67 malemRNANODE_2798_length_4671_cov_3.073144 2604..3614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9281.t1 ID=Gcaud9281.t1|Name=Gcaud9281.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=337bp
LARIPNGDAWNRNGSGIECRYLGHTNCFPGAARNPFGLDFKAAGLKWTTE
LCEKDSDGDGVTNGEELGDPCCQWTPEKPIQLRLTMLSHPGVAERSGAMD
AARCEAQTQLSPTAVPPENASPSASTSPTATASAPSTATTAPTVTAASTE
SAPSATPEEDDDNVCFPAHALVELQDGSVRRMDQISIGDMVRVGDRKYSA
VFMFTHQQQGVQYPFVALQTENVEQSLMLTAGHFLYANGRCVQAAAVRQG
DYLHMADGSTSKVLNVSVHIAHGLYNPQTIHGDLVVDGVRVTTYTSSVEK
FTAHSLLAPLRALYQACAFCAPLFKYAPEHVRSTLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf