Gcaud9269.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9269.t1
Unique NameGcaud9269.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length634
Homology
BLAST of Gcaud9269.t1 vs. uniprot
Match: A0A2V3IR72_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR72_9FLOR)

HSP 1 Score: 350 bits (899), Expect = 8.700e-108
Identity = 222/633 (35.07%), Postives = 355/633 (56.08%), Query Frame = 0
Query:    4 IRESETTLMPIVIHDKEPIGAIILRGPSLLCLCASGVVVLERDGVKYTPKGFDYVHASNKMTSICN-VEDESYALACSPAGDDEARSVLQISSIHWKGNTDTLFTVEDKFESCPTLRAASLSRRQLFFSTSDGVMHAVDMVSRTNNWRTRMHTDVVKNLHSAKLHDGLLILSTHNEAEDFYAVHVSNPADSSHSVGDIRKLFTTRCSQQRGANHIHFYVTWQSFLLKVNCQEGTCCDEEQSCGNPDSDAGSGNPSLFQIESHLGRRLESGLDQFLQDKERIDDKLKMVENVRALLAEELEHSDMRSFAPVFERKITCFASLPNRNAQTVQHGQTPEEYVHSQEHAESPTVNNDQF--NHRIDTFKLIDSCCRLDRLRSCVTIETQLAVNDLPCEGDEGSTKEVRAKLRLHSNDRIPAVWSCNEVCLSEKTGCYNLWATSPLEVFTNSSNLPNLTFTATIDLSDGRSHPVGLFTLASVMCSHENAASPIENDFRSEFS-NSQLYISAFGGSSDQMKDLLTEEDIVRNVKFVVRENMTRLTINPASQSESSTLLATLTMRAGDNIRFQSTPEPSKRSLFDVDTGLTLLEAEKKMMQDISSQKNVFGSTDEEIMSVIEKQIDVDEAFGLIEEQQLW 632
            I ++ T ++  V HD+EP+ A+I RGPSLL L  SGV+ L  DG K      D    + +  +I N  +D+S AL C+     +  S L++S++HWKG   T   V  +F S  +L AASL R    FST++G ++A D  ++   WR++  +   K++  A ++   L+L+T +E+ED Y + + N A+ ++ +              + A  +   V  +    +V          E     P S    GNPSL QIE +L  RL+ GLD+FL+   RI DK +++  +  LL EE+  S  + F P+F+  +   AS+ NR    V++  +P + + S EH +     + ++  +      KL+++ C LD  R+ +TI  ++A ++   + D  + + +  KL    +DRIP VWS NEV  +EK   Y+L+  +PL VF +SS LP LT +A + LS+G S  VGLFT+AS++ S+ ++ +  +  F +E S     +I A G +  Q+ +L   ED  +N      EN+ R T+N  S+++ +T +A L +RAGD ++F S+PEPS+ +L+ +DT +  L+ EKK++Q I SQ N +G T  +I+ V++KQIDVDEAFGL+EEQQLW
Sbjct:  131 ITDTSTEVLQAVNHDEEPVSAVITRGPSLLFLDVSGVMFLRYDGKKSIIYSCDDGQNAVEHWTIGNCADDDSRALICTYPHPGDF-SALEVSAVHWKGMVVTSSIVRHRFGSRLSLLAASLQRGVFLFSTAEGYLYAFDYNTQDGIWRSQKPS-AAKDVRCATVYKDFLVLTTSDESEDVYCLDLRNLANPAYFL--------------KSAIRMDLVVVTEKIERQV----------ESESSRPSS----GNPSLLQIEKNLESRLQKGLDRFLEHSGRIADKKQLLNRILVLLKEEVGSSTTKPFVPMFKHSLKHVASVRNRRESGVRNEDSPAKSLTS-EHEQLEGSGSRRYLKSPAAGVLKLVNNTCGLDCARNFLTIRAEIAFHESEYDRDVNTVEGLFMKLNFSCSDRIPTVWSFNEVPFTEKPQSYSLYGFAPLAVFAHSSKLPTLTCSARVTLSNGCSQIVGLFTIASILSSNYSSETAKKAAFIAEPSFKDGFHIIARGLAPGQLAELCRGEDTAQNASIASAENLPRFTLNSKSRNDLATTIARLAIRAGDKVKFYSSPEPSRSALYGIDTAINHLQDEKKLIQVIGSQTNAYGYTPADIVKVLQKQIDVDEAFGLVEEQQLW 732          
The following BLAST results are available for this feature:
BLAST of Gcaud9269.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR72_9FLOR8.700e-10835.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_466_length_24656_cov_4.601791contigNODE_466_length_24656_cov_4.601791:13536..15437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9269.t1Gcaud9269.t1Gracilaria caudata M_176_S67 malemRNANODE_466_length_24656_cov_4.601791 13536..15437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9269.t1 ID=Gcaud9269.t1|Name=Gcaud9269.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=634bp
MGIIRESETTLMPIVIHDKEPIGAIILRGPSLLCLCASGVVVLERDGVKY
TPKGFDYVHASNKMTSICNVEDESYALACSPAGDDEARSVLQISSIHWKG
NTDTLFTVEDKFESCPTLRAASLSRRQLFFSTSDGVMHAVDMVSRTNNWR
TRMHTDVVKNLHSAKLHDGLLILSTHNEAEDFYAVHVSNPADSSHSVGDI
RKLFTTRCSQQRGANHIHFYVTWQSFLLKVNCQEGTCCDEEQSCGNPDSD
AGSGNPSLFQIESHLGRRLESGLDQFLQDKERIDDKLKMVENVRALLAEE
LEHSDMRSFAPVFERKITCFASLPNRNAQTVQHGQTPEEYVHSQEHAESP
TVNNDQFNHRIDTFKLIDSCCRLDRLRSCVTIETQLAVNDLPCEGDEGST
KEVRAKLRLHSNDRIPAVWSCNEVCLSEKTGCYNLWATSPLEVFTNSSNL
PNLTFTATIDLSDGRSHPVGLFTLASVMCSHENAASPIENDFRSEFSNSQ
LYISAFGGSSDQMKDLLTEEDIVRNVKFVVRENMTRLTINPASQSESSTL
LATLTMRAGDNIRFQSTPEPSKRSLFDVDTGLTLLEAEKKMMQDISSQKN
VFGSTDEEIMSVIEKQIDVDEAFGLIEEQQLWL*
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