Gcaud9265.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9265.t1
Unique NameGcaud9265.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length208
Homology
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BLAST of Gcaud9265.t1 vs. uniprot
Match: A0A2V3IR96_9FLOR (Fork head transcription factor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR96_9FLOR)

HSP 1 Score: 243 bits (621), Expect = 2.450e-78
Identity = 124/227 (54.63%), Postives = 155/227 (68.28%), Query Frame = 0 
Query:    1 MTETRAYAKLVGNDWEYYMTKPSIILGRGGKGVTCDFVLSEASI------------------------------------LSPPKLLRSQAEIRYGREDAMSLSFILPPGDKLTLKKKNSRNNSQIPMLQWIGEALLSGDPLNAKQIRERIETTRPNQLKKLGSESTIASCIRHVLTQNDHIFFAQDSSSIGTKTSRRGDSSAYEIESNDACFSVHDSQKSRFFLES 191
            M+E RAYAKLVG DW+YYMTKP I+LGRGGK + CD  LS  ++                                    LSPP +LRSQA+I YG+ D M  SF++P G + TLKKK+S++NSQ+P+LQWIGEALL G PLN KQIR+RIE+  PNQL+KLG+E  I+S IRHVLTQN+HIFF  D +++GTKTS RGD+SAY   +NDACFS+++ QKSRFF  S
Sbjct:    1 MSEIRAYAKLVGRDWQYYMTKPMIVLGRGGKDIECDVTLSNNTVVSRQHFTIRFVPELQAFEVKTLSKNGIIVNGEFLHKLSPPVILRSQADILYGKNDDMCFSFLIPSGGRPTLKKKSSQHNSQVPLLQWIGEALLGGTPLNGKQIRDRIESIHPNQLRKLGTEHIISSSIRHVLTQNNHIFFVYDWNAVGTKTSHRGDASAYTNGNNDACFSIYERQKSRFFQRS 227
The following BLAST results are available for this feature:
BLAST of Gcaud9265.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR96_9FLOR2.450e-7854.63Fork head transcription factor 1 n=1 Tax=Gracilari... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_466_length_24656_cov_4.601791contigNODE_466_length_24656_cov_4.601791:2989..3720 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9265.t1Gcaud9265.t1Gracilaria caudata M_176_S67 malemRNANODE_466_length_24656_cov_4.601791 2989..3720 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9265.t1 ID=Gcaud9265.t1|Name=Gcaud9265.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=208bp
MTETRAYAKLVGNDWEYYMTKPSIILGRGGKGVTCDFVLSEASILSPPKL
LRSQAEIRYGREDAMSLSFILPPGDKLTLKKKNSRNNSQIPMLQWIGEAL
LSGDPLNAKQIRERIETTRPNQLKKLGSESTIASCIRHVLTQNDHIFFAQ
DSSSIGTKTSRRGDSSAYEIESNDACFSVHDSQKSRFFLESSQTPNDGKR
NQKAGET*
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