Gcaud9263.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9263.t1
Unique NameGcaud9263.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length479
Homology
BLAST of Gcaud9263.t1 vs. uniprot
Match: A0A2V3ID24_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID24_9FLOR)

HSP 1 Score: 649 bits (1674), Expect = 3.040e-230
Identity = 344/480 (71.67%), Postives = 394/480 (82.08%), Query Frame = 0
Query:    1 MNDFKSRVSSR-IFPESDPAHTISIKVLKKSLQSAADNSVRKRNWYERYLPLPTRRRVLVEASECGTTDSILYASERPNVNESHQRVTATEFVKVSQDMCSDVVRRDDDFEVSFVGLSVAQQDYIGDNEMLLCSLARKQDHQDELQSSSTTASSSVDSSSLTAENQNASVHNEDSISEKAFQKAKLRDGTVPIPPKKKKIDLSDLPTALPIRAGDVPFLHFDPETDGHDSGSEPDSFVPIPGTKRLFIQRRGSQLD-GDSEGMRDVSVRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPYLKFISWLLKFANTVGRSALRKVARPDHVMSTDVSFMLAEPEGIEKGDDGYEQREEYGNYLRYGYYFFLSGPVDAKLYAQTGASTQNVQLLLRRHGYRAKSALLNEKEYFPLSGVSYVVVKVTRGCSPYDKDQRKDMFERHRGRLTQLLKKYTGTLGSMTAEAATGTVAKKEEQNE 478
            MND K+R+S+R +F ++ P  TISI VL+KSLQSA  +S+RKR+W+ER LPLPTRRRV VEASE GT DSIL+A ERPN NESHQRV ATEF+KV+Q+ CSDVVR DDDFEVSF+GLSVAQQDYIGDNEMLLCSLAR++DHQ+ L+  +++A S+++SS+ + +        ED        K   RDG VPIPPK+K +DLSDLPTALPIR GDV FLHFDPETDGHD+GSEPD+F PIPGTKRLFIQRRGS     +   +RDVS+RFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVP LKFISWLLKFANTVGRSAL+KVARPDHVMS+DVSFMLAEPE +   D    QREEYGNYLRYGYYFFL  PVDAKL+AQT AST NVQLL++ HGYRAK A LNEKEYFPLSGVSYVV+KVTRGCSP D  QR +MF RH GRLTQLLKKYTGTLGS+TA A     ++ E++ +
Sbjct:    1 MNDLKTRISTRALFTDATPDSTISIIVLRKSLQSATSDSLRKRDWHERCLPLPTRRRVFVEASEYGTADSILFAPERPNANESHQRVAATEFIKVNQNTCSDVVRHDDDFEVSFIGLSVAQQDYIGDNEMLLCSLARREDHQEVLEYLASSAYSTINSSNSSVDAHKNGTE-EDVAVRSDVGKTNERDGVVPIPPKQKTVDLSDLPTALPIRPGDVTFLHFDPETDGHDTGSEPDTFTPIPGTKRLFIQRRGSASTLAEGGNVRDVSIRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPILKFISWLLKFANTVGRSALKKVARPDHVMSSDVSFMLAEPE-VSSNDGRTIQREEYGNYLRYGYYFFLFSPVDAKLHAQTDASTHNVQLLIKHHGYRAKMANLNEKEYFPLSGVSYVVIKVTRGCSPCDNKQRSEMFARHLGRLTQLLKKYTGTLGSVTAFAVGNAYSETEKKED 478          
BLAST of Gcaud9263.t1 vs. uniprot
Match: A0A2V3III8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3III8_9FLOR)

HSP 1 Score: 237 bits (604), Expect = 3.090e-69
Identity = 160/443 (36.12%), Postives = 250/443 (56.43%), Query Frame = 0
Query:   20 HTISIKVLKKSLQSAADNSVRKRNWYERYLPLPTRRRVLVEASECGTTDSILYASERPNVNESHQRVTATEFVKVSQDMCSDVVRRDDDFEVSFVGLSVAQQDYIG--DNEMLLCSLARKQDHQDELQSSSTTASSSVDSSSLTAENQNASVHNEDSISEKAFQKAKLRDGTVPIPPKKKKIDLSDLPTALPIRAGDVPFLHFDPETDGHDSGSEPDSFVPIPGTKRLFIQRRGS----QLDGDSEGMRDVSVRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPYLKFISWLLKFANTVGRSALRKVARPDHVMSTDVSFMLAE---PEGIEKGDDGYEQREEYG--NYLRYGYYFFLSGPVDAKLYAQTGASTQNVQLLLRRHGYRAKSALLNEKEYFPLSGVSYVVVKVTRGCSPYDKDQRKDMFERHRGRLTQLL 451
            ++ISI V    L+ +A+N +RK N + R       RRV VEA+     D + YA +  +  ES  R TAT++++++ D+  ++V++ D+FE+SFVG++++ QD      NE++L SL    D      +    A     ++SL    QN  V ++    +++  K +          +   ID S L  AL     DVPF+H+D E DG  +G++P++FVPIP +K ++ Q R S    ++D D     D+SVRF V++IDK+++EQ+ A+  + ++   V K A ++PY + ++   +    +G+  LRK + PDHV+  D+ F LA    P G +    G    E     NYLRYGYYFFL   VDAKLY QT +S QNV LLLRR  + AK A  NE E+FP++ VSYVV+KV+  C+   ++Q+  + + H+ RL  +L
Sbjct:    9 NSISILVHPNDLKGSANNGLRKGNRFSRRTCFRRWRRVSVEAAPAMVRDRVFYAPDESHKPESTSR-TATQYIRITPDV-DNLVKKGDEFEISFVGMNISPQDLFACNKNELVLYSLTSGSDS-----AKCEWAQKISSANSLKVNMQNGFVVSDQVAPDQSQPKIR----------RVASID-SRLNPALSTYQKDVPFIHYDTEGDGRTTGTKPNTFVPIPASKAVYKQFRRSCRRREIDDD-----DISVRFEVLDIDKVSDEQIEAVFGITQLGDFVEKGAVALPYAELVARAFQAVAAIGKRGLRKYSAPDHVLPVDMKFRLANSHMPAGDDSKSKGTNVTEHTSRANYLRYGYYFFLEKNVDAKLYVQTRSSAQNVPLLLRRTDFDAKCAQRNELEWFPMTNVSYVVMKVSPACTSGLEEQKMALCKAHKQRLDAIL 428          
BLAST of Gcaud9263.t1 vs. uniprot
Match: A0A2V3IEE2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEE2_9FLOR)

HSP 1 Score: 177 bits (448), Expect = 3.590e-47
Identity = 125/383 (32.64%), Postives = 193/383 (50.39%), Query Frame = 0
Query:   90 EFVKVSQDMCSDVVRRDDDFEVSFVGLSVAQQDYI-------GDNEMLLCSLARKQDHQDELQSSSTTASSSVDSSSLTAENQNASVHNEDSISEKAFQ---KAKLRDGTVPIPPKKKKIDLSDLPTALPIRAG-DVPFLHFDPETDGHDSGSEPDSFVPIPGTKRLFI-------QRRGSQLDGDSEGMRDVSVRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPYLKFISWLLKFANTVGRSALRKVARPDHVMSTDVSFMLAEPEGIEKGDDGYEQ---REEYGNYLRYGYYFFLSGPVDAKLYAQTGASTQNVQLLLRRHGYRAKSALLNEKEYFPLSGVSYVVVKVTRGCSPYDKDQRKDMFERHRGRLTQLL 451
            E  KV  D   +VVR  D+F +SFVG+SVA  D +        DNE+LL S+                 +SS+ ++++  E    +  +E  +SEK      KA+L     P    K   +   L       A  D  F+H+DP  D H++G+  D+FV +P +KR +        + + +Q   D   ++ + V+FTVMEIDK+++ Q  A+  ++ V   +   A S+PY+  ++      +++G+  L+  +RPDHV+S DV F LA     +  +DG      R +  NYLRYGYYFFLS  V AKLY  T A   ++ L+++R              YFPL+ VSYVV+KV+RGC     ++ +   E H+ RL  +L
Sbjct:    5 EMDKVRPD-AKNVVRNTDEFVISFVGMSVASHDAVTGLSKHKSDNELLLYSVK-------------CATNSSLPNATIAEEE---TTQDELELSEKNVDDEGKAELIREKDPSSTAKHLENAEQLKVPTTFGANNDSVFIHYDPVADAHNTGTLADTFVNVPASKRAYACSKEVLREHKNNQEADDRLCLKKIPVKFTVMEIDKISDMQARAVMGVDHVGSFMSDTAGSIPYIALLTKAFAVGSSIGKHGLKSYSRPDHVLSADVEFCLANAPSDDDNEDGENDESVRTKKENYLRYGYYFFLSHKVPAKLYTMTNAVDDSLPLMMKRAEEGLSRRRGQHCRYFPLTEVSYVVMKVSRGCCSLSHEEIRKRSEGHKVRLENML 370          
The following BLAST results are available for this feature:
BLAST of Gcaud9263.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ID24_9FLOR3.040e-23071.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3III8_9FLOR3.090e-6936.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEE2_9FLOR3.590e-4732.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1479_length_10340_cov_4.883306contigNODE_1479_length_10340_cov_4.883306:6664..8185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9263.t1Gcaud9263.t1Gracilaria caudata M_176_S67 malemRNANODE_1479_length_10340_cov_4.883306 6664..8185 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9263.t1 ID=Gcaud9263.t1|Name=Gcaud9263.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=479bp
MNDFKSRVSSRIFPESDPAHTISIKVLKKSLQSAADNSVRKRNWYERYLP
LPTRRRVLVEASECGTTDSILYASERPNVNESHQRVTATEFVKVSQDMCS
DVVRRDDDFEVSFVGLSVAQQDYIGDNEMLLCSLARKQDHQDELQSSSTT
ASSSVDSSSLTAENQNASVHNEDSISEKAFQKAKLRDGTVPIPPKKKKID
LSDLPTALPIRAGDVPFLHFDPETDGHDSGSEPDSFVPIPGTKRLFIQRR
GSQLDGDSEGMRDVSVRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASS
VPYLKFISWLLKFANTVGRSALRKVARPDHVMSTDVSFMLAEPEGIEKGD
DGYEQREEYGNYLRYGYYFFLSGPVDAKLYAQTGASTQNVQLLLRRHGYR
AKSALLNEKEYFPLSGVSYVVVKVTRGCSPYDKDQRKDMFERHRGRLTQL
LKKYTGTLGSMTAEAATGTVAKKEEQNE*
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