Gcaud9262.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9262.t1
Unique NameGcaud9262.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length474
Homology
BLAST of Gcaud9262.t1 vs. uniprot
Match: A0A2V3ID24_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID24_9FLOR)

HSP 1 Score: 621 bits (1601), Expect = 3.130e-219
Identity = 326/474 (68.78%), Postives = 378/474 (79.75%), Query Frame = 0
Query:    1 MAELTSRITSR-IFADPTPSHTVSIKVRRKALQSAVDNSVRKRDFYDRYVPYHTRRRILVEATEGGTTDSILFAPERPNVTESHRRVTATEFVKVSQDTCTDLVRRNHDFEVSFVGFSVAQQDYIGDNELLLCSLARKSDHQEVLE--------SGSSITSSXXXXXXXXXNDTTISDKEFQKAKLRDGTVPIPPKKKKIDLSDLPTALPIRPGDIPFLHFDPETDGHDSGSEPDSFVPIPGTKRLFIQRRGSQLD-GDSEGMRDVSVRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPYLKFISWLLKFANTVGRSALRKVARPDHVMSTDVSFMLAEPEGIEKGDDGYEQREEYGNYLRYGYYFFLSGPVDAKLYAQTGASTQNVQLLLHRHGYRARLAAVNEKEYFPLTGVSYAVLKVTRGCSPYDIEQRRDMFDRHRGRLIQLLKKYTGTLESMTAEAAAGSEAE 464
            M +L +RI++R +F D TP  T+SI V RK+LQSA  +S+RKRD+++R +P  TRRR+ VEA+E GT DSILFAPERPN  ESH+RV ATEF+KV+Q+TC+D+VR + DFEVSF+G SVAQQDYIGDNE+LLCSLAR+ DHQEVLE        + +S  SS          D  +   +  K   RDG VPIPPK+K +DLSDLPTALPIRPGD+ FLHFDPETDGHD+GSEPD+F PIPGTKRLFIQRRGS     +   +RDVS+RFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVP LKFISWLLKFANTVGRSAL+KVARPDHVMS+DVSFMLAEPE +   D    QREEYGNYLRYGYYFFL  PVDAKL+AQT AST NVQLL+  HGYRA++A +NEKEYFPL+GVSY V+KVTRGCSP D +QR +MF RH GRL QLLKKYTGTL S+TA A   + +E
Sbjct:    1 MNDLKTRISTRALFTDATPDSTISIIVLRKSLQSATSDSLRKRDWHERCLPLPTRRRVFVEASEYGTADSILFAPERPNANESHQRVAATEFIKVNQNTCSDVVRHDDDFEVSFIGLSVAQQDYIGDNEMLLCSLARREDHQEVLEYLASSAYSTINSSNSSVDAHKNGTEEDVAVRS-DVGKTNERDGVVPIPPKQKTVDLSDLPTALPIRPGDVTFLHFDPETDGHDTGSEPDTFTPIPGTKRLFIQRRGSASTLAEGGNVRDVSIRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPILKFISWLLKFANTVGRSALKKVARPDHVMSSDVSFMLAEPE-VSSNDGRTIQREEYGNYLRYGYYFFLFSPVDAKLHAQTDASTHNVQLLIKHHGYRAKMANLNEKEYFPLSGVSYVVIKVTRGCSPCDNKQRSEMFARHLGRLTQLLKKYTGTLGSVTAFAVGNAYSE 472          
BLAST of Gcaud9262.t1 vs. uniprot
Match: A0A2V3III8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3III8_9FLOR)

HSP 1 Score: 239 bits (610), Expect = 3.510e-70
Identity = 160/440 (36.36%), Postives = 244/440 (55.45%), Query Frame = 0
Query:   16 PTPSHTVSIKVRRKALQSAVDNSVRKRDFYDRYVPYHTRRRILVEATEGGTTDSILFAPERPNVTESHRRVTATEFVKVSQDTCTDLVRRNHDFEVSFVGFSVAQQDYIG--DNELLLCSLARKSDHQEVLESGSSITSSXXXXXXXXXNDTTISDKEFQKAKLRDGTVPIPPKKKKIDLSDLPTALPIRPGDIPFLHFDPETDGHDSGSEPDSFVPIPGTKRLFIQRRGS----QLDGDSEGMRDVSVRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPYLKFISWLLKFANTVGRSALRKVARPDHVMSTDVSFMLAE---PEGIEKGDDGYEQREEYG--NYLRYGYYFFLSGPVDAKLYAQTGASTQNVQLLLHRHGYRARLAAVNEKEYFPLTGVSYAVLKVTRGCSPYDIEQRRDMFDRHRGRLIQLLK 444
            P P+ ++SI V    L+ + +N +RK + + R   +   RR+ VEA      D + +AP+  +  ES  R TAT++++++ D   +LV++  +FE+SFVG +++ QD      NEL+L SL   SD  +  E    I SS         N   +SD+        D + P   +   ID S L  AL     D+PF+H+D E DG  +G++P++FVPIP +K ++ Q R S    ++D D     D+SVRF V++IDK+++EQ+ A+  + ++   V K A ++PY + ++   +    +G+  LRK + PDHV+  D+ F LA    P G +    G    E     NYLRYGYYFFL   VDAKLY QT +S QNV LLL R  + A+ A  NE E+FP+T VSY V+KV+  C+    EQ+  +   H+ RL  +L+
Sbjct:    6 PKPN-SISILVHPNDLKGSANNGLRKGNRFSRRTCFRRWRRVSVEAAPAMVRDRVFYAPDESHKPESTSR-TATQYIRITPDV-DNLVKKGDEFEISFVGMNISPQDLFACNKNELVLYSLTSGSDSAKC-EWAQKI-SSANSLKVNMQNGFVVSDQVAP-----DQSQPKIRRVASID-SRLNPALSTYQKDVPFIHYDTEGDGRTTGTKPNTFVPIPASKAVYKQFRRSCRRREIDDD-----DISVRFEVLDIDKVSDEQIEAVFGITQLGDFVEKGAVALPYAELVARAFQAVAAIGKRGLRKYSAPDHVLPVDMKFRLANSHMPAGDDSKSKGTNVTEHTSRANYLRYGYYFFLEKNVDAKLYVQTRSSAQNVPLLLRRTDFDAKCAQRNELEWFPMTNVSYVVMKVSPACTSGLEEQKMALCKAHKQRLDAILQ 429          
BLAST of Gcaud9262.t1 vs. uniprot
Match: A0A2V3IEE2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEE2_9FLOR)

HSP 1 Score: 180 bits (456), Expect = 2.230e-48
Identity = 123/376 (32.71%), Postives = 186/376 (49.47%), Query Frame = 0
Query:   90 EFVKVSQDTCTDLVRRNHDFEVSFVGFSVAQQDYI-------GDNELLLCSLARKSDHQEVLESGSSITSSXXXXXXXXXNDTTISDKEFQ---KAKLRDGTVPIPPKKKKIDLSDL--PTALPIRPGDIPFLHFDPETDGHDSGSEPDSFVPIPGTKRLFI-------QRRGSQLDGDSEGMRDVSVRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPYLKFISWLLKFANTVGRSALRKVARPDHVMSTDVSFMLAEPEGIEKGDDGYEQ---REEYGNYLRYGYYFFLSGPVDAKLYAQTGASTQNVQLLLHRHGYRARLAAVNEKEYFPLTGVSYAVLKVTRGCSPYDIEQRRDMFDRHRGRLIQLL 443
            E  KV  D   ++VR   +F +SFVG SVA  D +        DNELLL S+           + SS+ ++         ++  +S+K      KA+L     P    K   +   L  PT       D  F+H+DP  D H++G+  D+FV +P +KR +        + + +Q   D   ++ + V+FTVMEIDK+++ Q  A+  ++ V   +   A S+PY+  ++      +++G+  L+  +RPDHV+S DV F LA     +  +DG      R +  NYLRYGYYFFLS  V AKLY  T A   ++ L++ R              YFPLT VSY V+KV+RGC     E+ R   + H+ RL  +L
Sbjct:    5 EMDKVRPDA-KNVVRNTDEFVISFVGMSVASHDAVTGLSKHKSDNELLLYSVK--------CATNSSLPNATIAEEETTQDELELSEKNVDDEGKAELIREKDPSSTAKHLENAEQLKVPTTFGAN-NDSVFIHYDPVADAHNTGTLADTFVNVPASKRAYACSKEVLREHKNNQEADDRLCLKKIPVKFTVMEIDKISDMQARAVMGVDHVGSFMSDTAGSIPYIALLTKAFAVGSSIGKHGLKSYSRPDHVLSADVEFCLANAPSDDDNEDGENDESVRTKKENYLRYGYYFFLSHKVPAKLYTMTNAVDDSLPLMMKRAEEGLSRRRGQHCRYFPLTEVSYVVMKVSRGCCSLSHEEIRKRSEGHKVRLENML 370          
The following BLAST results are available for this feature:
BLAST of Gcaud9262.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ID24_9FLOR3.130e-21968.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3III8_9FLOR3.510e-7036.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEE2_9FLOR2.230e-4832.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1479_length_10340_cov_4.883306contigNODE_1479_length_10340_cov_4.883306:4207..5743 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9262.t1Gcaud9262.t1Gracilaria caudata M_176_S67 malemRNANODE_1479_length_10340_cov_4.883306 4207..5743 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9262.t1 ID=Gcaud9262.t1|Name=Gcaud9262.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=474bp
MAELTSRITSRIFADPTPSHTVSIKVRRKALQSAVDNSVRKRDFYDRYVP
YHTRRRILVEATEGGTTDSILFAPERPNVTESHRRVTATEFVKVSQDTCT
DLVRRNHDFEVSFVGFSVAQQDYIGDNELLLCSLARKSDHQEVLESGSSI
TSSTTTNTASSSNDTTISDKEFQKAKLRDGTVPIPPKKKKIDLSDLPTAL
PIRPGDIPFLHFDPETDGHDSGSEPDSFVPIPGTKRLFIQRRGSQLDGDS
EGMRDVSVRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPYLKFIS
WLLKFANTVGRSALRKVARPDHVMSTDVSFMLAEPEGIEKGDDGYEQREE
YGNYLRYGYYFFLSGPVDAKLYAQTGASTQNVQLLLHRHGYRARLAAVNE
KEYFPLTGVSYAVLKVTRGCSPYDIEQRRDMFDRHRGRLIQLLKKYTGTL
ESMTAEAAAGSEAEEQFSGLKKP*
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