Gcaud9258.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9258.t1
Unique NameGcaud9258.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length258
Homology
BLAST of Gcaud9258.t1 vs. uniprot
Match: A0A2V3IUF6_9FLOR (ALA-interacting subunit 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUF6_9FLOR)

HSP 1 Score: 365 bits (938), Expect = 1.150e-123
Identity = 171/265 (64.53%), Postives = 208/265 (78.49%), Query Frame = 0
Query:   13 CTVEVFIEKTIRAPSYLYYSLTDYYQNARQYAKSRSDVMNMGVVPSVSLDVSTCDPWLYKPNTSEGANGYDPTEIRYPCGLTAYSVFNDTFEFCEDRNCQQKINLRKKGIAWQTDVEHKFRPNEESELFKEEVD-RASSPDGTSANDLLQDEAFIVWMRLSAFRDFDKLYRIIDDDIPGGRSYFMRVNSSYPVIDFNGTKAFEISTVKWFGGRNPFLRTAYLIVGIG-------------------HSLDPAIWMREHLEKLNLE 257
            C VEV I+K I APSYL+YSLTD++QNAR+Y KSRSDVMNMG VP+ SL+VSTC+PWL+KPNT++G  G+DP E RYPCGLTA+S FNDTF+FC+D  C+Q++  +KKGIAW TDVEHKFRPN++S  F E VD RAS+ D TSANDLLQDE FIVWMRLSAFRDFDKLYRIID+D+PG  +++M +NS++PV  FNGTKAFE+STVKWFGGRNPFL  AYL VG+                       DPAIW+R++L KL++E
Sbjct:  118 CLVEVPIDKPIPAPSYLFYSLTDFHQNARKYVKSRSDVMNMGKVPTTSLEVSTCEPWLFKPNTTQGEKGFDPAEFRYPCGLTAFSTFNDTFQFCKDEKCEQRVKWKKKGIAWWTDVEHKFRPNQDSRFFTEAVDDRASARDRTSANDLLQDEDFIVWMRLSAFRDFDKLYRIIDEDLPGNSTFYMSINSTFPVSSFNGTKAFEVSTVKWFGGRNPFLGGAYLFVGMAALSVACFLLATHVCSPQSSRPSDPAIWLRDYLHKLDME 382          
BLAST of Gcaud9258.t1 vs. uniprot
Match: A0A1X6NZ39_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZ39_PORUM)

HSP 1 Score: 180 bits (456), Expect = 6.620e-51
Identity = 91/224 (40.62%), Postives = 127/224 (56.70%), Query Frame = 0
Query:   13 CTVEVFIEKTIRAPSYLYYSLTDYYQNARQYAKSRSDVMNMGVVPSVSLDVSTCDPWLYKPNTSEGANGYDPTEIRYPCGLTAYSVFNDTFEFCEDRNCQQKINLRKKGIAWQTDVEHKFRPNEESELFKEEVDRASSPDGTSANDLLQDEAFIVWMRLSAFRDFDKLYRIIDDDIPGGRSYFMRVNSSYPVIDFNGTKAFEISTVKWFGGRNPFLRTAYLIVG 236
            C V+V +++ + APSY+YY L +++QN R Y KSRS     G     + D+S CDP   K    +G           PCGLTA+S FNDT   C+DR+C + +   K GIAW  DV  +F+    S  +  +++R           L+ D  F VWMRL+A+  F KLY +I +D+   R YF+R+++ YPV  F G K F I+  +WFGGRN FL  AYL+VG
Sbjct:  127 CVVQVRLDRNVSAPSYMYYGLVNFFQNQRNYIKSRSAEQLRGDFEPGTTDLSECDP---KVENEDGVE-------LLPCGLTAFSFFNDTLTLCKDRDCAETVGTTKNGIAWDVDVNTRFQEGPASAGYTPDINR-----------LITDPDFAVWMRLAAYGTFRKLYYVITEDLEADRDYFVRIDARYPVESFGGEKFFVIAETRWFGGRNNFLAYAYLVVG 329          
BLAST of Gcaud9258.t1 vs. uniprot
Match: A0A7S0G385_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G385_9RHOD)

HSP 1 Score: 170 bits (431), Expect = 1.670e-47
Identity = 99/250 (39.60%), Postives = 142/250 (56.80%), Query Frame = 0
Query:    5 TGGPTTVTCTVEVFIEKTIRAPSYLYYSLTDYYQNARQYAKSRSDVMNMGVVPSVSLDVSTCDPWLYKPNTSEGANGYDPTEIRYPCGLTAYSVFNDTFEFCEDRNCQQKINLRKKGIAWQTDVEHKFRPNEESELFKEEVDRASSPDGTSANDLLQDEAFIVWMRLSAFRDFDKLYRIIDDDIPGGRSYFMRVNSSYPVIDFNGTKAFEISTVKWFGGRNPFLRTAYLIV-GIGHSLDPAIWMREHLEK 253
            T   TT  C VE+ + +T++AP Y+YY LT+++QN R+Y  SR+ +   G        +S+CDP ++ PN          TEI  PCGLTA+S FNDTF FC+D  CQ +IN   +GIAW++D +  F+P                P   + N+L+    FIVWMRL++F  F KLYRI+++D+  G +YFM + S+YPV  ++GTK   I+   WFG R   L   YL + G    +  A+ +R HL K
Sbjct:  101 TSDGTTNNCQVEIEVTETLKAPFYVYYGLTNFHQNHRRYVSSRNSLQLAGE-EQTDEQLSSCDPIVFFPNG---------TEI-IPCGLTAWSRFNDTFTFCKDTGCQDQINWTDQGIAWESDEDVAFQPG---------------PWTDAQNELINSPDFIVWMRLASFDTFTKLYRIVNEDLAPG-TYFMDIGSNYPVSGYDGTKFIAITETSWFGTRKTSLGIIYLAMCGCLFVIATALLLR-HLIK 322          
BLAST of Gcaud9258.t1 vs. uniprot
Match: A0A5J4Z203_PORPP (ALA-interacting subunit 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z203_PORPP)

HSP 1 Score: 169 bits (428), Expect = 6.450e-47
Identity = 95/230 (41.30%), Postives = 133/230 (57.83%), Query Frame = 0
Query:   10 TVTCTVEVFIEKTIRAPSYLYYSLTDYYQNARQYAKSRSDVMNMGVVPSVSLDVSTCDPWLYKPNTSEGANGYDPTEIRYPCGLTAYSVFNDTFEFCEDRNCQQKINLRKKGIAWQTDVEHKFRPNEESELFKEEVDRASSPDG--TSA-NDLLQDEAFIVWMRLSAFRDFDKLYRIIDDDIPGGRSYFMRVNSSYPVIDFNGTKAFEISTVKWFGGRNPFLRTAYLIVG 236
            T TCTVE+ IE+ I  P+Y YY +++Y+QN R Y +SRS     G  P  +  + TC+P L   N++ G      T I  PCGLTA+SVFNDTF  CEDR C   +   ++GI W TD   KF+    ++         S P G  T A NDL+    F+VWMRL+AF +F+KL  I+ +      +Y++++ ++YPV  F+GTK+  I  V W+G  N FL  AY+ VG
Sbjct:  119 TKTCTVEITIEEDIEPPAYFYYRMSNYFQNVRTYTRSRSSPQLAGQWPLTTGQLDTCEPIL--DNSTTG------TPI--PCGLTAWSVFNDTFVLCEDRECNNPVPTTQEGIEWPTDSSTKFKAGPTAD---------SDPPGPWTDADNDLITSTPFMVWMRLAAFSEFNKLNLIVQNQTLTRGTYYVQITNNYPVSSFDGTKSIIIFQVAWYGSANSFLGIAYVTVG 329          
BLAST of Gcaud9258.t1 vs. uniprot
Match: A0A7S3A940_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A940_9RHOD)

HSP 1 Score: 169 bits (427), Expect = 6.850e-47
Identity = 98/250 (39.20%), Postives = 139/250 (55.60%), Query Frame = 0
Query:    5 TGGPTTVTCTVEVFIEKTIRAPSYLYYSLTDYYQNARQYAKSRSDVMNMGVVPSVSLDVSTCDPWLYKPNTSEGANGYDPTEIRYPCGLTAYSVFNDTFEFCEDRNCQQKINLRKKGIAWQTDVEHKFRPNEESELFKEEVDRASSPDGTSANDLLQDEAFIVWMRLSAFRDFDKLYRIIDDDIPGGRSYFMRVNSSYPVIDFNGTKAFEISTVKWFGGRNPFLRTAYL-IVGIGHSLDPAIWMREHLEK 253
            T   TT  C VE+ + +T++AP Y+YY LT+Y+QN R+Y  SRS     G        +S+C+P L+ PN +          +  PCGLTA+S FNDTF FC D +CQ +I+   +GIAW++D +  F+P                P   + N+L+    FIVWMRL++F  F KLYRI+ +D+  G +YFM + S+YPV  ++GTK   I+   WFG R   L   YL I G    +  A+ +R HL K
Sbjct:  103 TSDGTTFNCQVEIEVTETLKAPFYVYYGLTNYHQNHRRYVSSRSSKQLAGE-EQTDEQLSSCEPILFFPNGT----------VIIPCGLTAWSRFNDTFAFCRDPSCQDQISWTDQGIAWESDEDIAFQPG---------------PWTDAQNELINSPDFIVWMRLASFDTFTKLYRIVTEDLSPG-TYFMDIASNYPVSGYDGTKFIAITETSWFGTRKTSLGIIYLSICGCLFVIATALLVR-HLIK 324          
BLAST of Gcaud9258.t1 vs. uniprot
Match: D3AWL9_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AWL9_POLPP)

HSP 1 Score: 165 bits (418), Expect = 3.820e-46
Identity = 94/227 (41.41%), Postives = 129/227 (56.83%), Query Frame = 0
Query:   13 CTVEVFIEKTIRAPSYLYYSLTDYYQNARQYAKSRSDVMNMGVVPSVSLDVSTCDPWLYKPNTSEGANGYDPTEIRYPCGLTAYSVFNDTFEFCEDRNCQQKINLRKKGIAWQTDVEHKFR--PNEESELFKEEVDRASSPDGTSANDLLQDEAFIVWMRLSAFRDFDKLYRIIDDDIPGGRSYFMRVNSSYPVIDFNGTKAFEISTVKWFGGRNPFLRTAYLIVGI 237
            C + + I K ++AP YLYY L ++YQN R+Y KSR+D    G+V +    +  CDP++   ++S  AN Y       PCGL A S+FNDTF   ++      I L+KKGIAW +DV+ KF+  PN+                G        DE FIVWMR +   DF KLYRII+ DI  G + F+ ++S+YPV  F G K   +ST  W GG+NPFL  AY++VG+
Sbjct:   78 CVLNMTIPKDMKAPVYLYYRLDNFYQNHRRYVKSRNDDQLRGIVVTDYDKLKDCDPYISVNDSSNPANFY------LPCGLIARSMFNDTFSLQQNNI---SIPLQKKGIAWSSDVDKKFKNPPND--------------APGVRVIQDFTDEDFIVWMRTAGLPDFKKLYRIINQDIKAG-TVFVNISSNYPVNSFEGKKYVVLSTTTWIGGKNPFLGYAYIVVGV 280          
BLAST of Gcaud9258.t1 vs. uniprot
Match: F0Z9X8_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z9X8_DICPU)

HSP 1 Score: 164 bits (415), Expect = 1.420e-45
Identity = 97/238 (40.76%), Postives = 129/238 (54.20%), Query Frame = 0
Query:   13 CTVEVFIEKTIRAPSYLYYSLTDYYQNARQYAKSRSDVMNMGVVPSVSLDVSTCDPWLYKPNTSEGANGYDPTEIRYPCGLTAYSVFNDTFEFCEDRNCQQKINLRKKGIAWQTDVEHKFRPNEESELFKEEVDRASSPDGTSANDLLQDEAFIVWMRLSAFRDFDKLYRIIDDDIPGGRSYFMRVNSSYPVIDFNGTKAFEISTVKWFGGRNPFLRTAYLIVGIGHSLDPAIWMREH 250
            C + + I   ++ P YLYY L ++YQN R+Y KSR+D    G+V +    +  C+P +    TS+G N     +I  PCGL A S FNDTF      N    INLRKKGIAW +DVE KF+            D  ++  G    +   DE FIVWMR +A  DF KLYRI D   P   S  + + + YPV  FNG K   +ST  W GG+NPFL  AY+IVGI   +   +++ +H
Sbjct:   84 CDITINIPTPMKPPVYLYYRLDNFYQNHRRYVKSRNDDQLRGIVVTDFNKLKDCEPLI----TSDGENS-SIDKILVPCGLIANSKFNDTFLMFTKNNTY--INLRKKGIAWTSDVETKFK------------DYPANGTGIITFNKFSDEDFIVWMRTAALPDFKKLYRIYDGPEPLTDSVRVEITNYYPVQSFNGKKYVVLSTASWMGGKNPFLGYAYIIVGIICFVQGVVFLVKH 302          
BLAST of Gcaud9258.t1 vs. uniprot
Match: A0A2V3J161_9FLOR (ALA-interacting subunit 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J161_9FLOR)

HSP 1 Score: 163 bits (412), Expect = 1.040e-44
Identity = 92/224 (41.07%), Postives = 128/224 (57.14%), Query Frame = 0
Query:   13 CTVEVFIEKTIRAPSYLYYSLTDYYQNARQYAKSRSDVMNMGVVPSVSLDVSTCDPWLYKPNTSEGANGYDPTEIRYPCGLTAYSVFNDTFEFCEDRNCQQKINLRKKGIAWQTDVEHKFRPNEESELFKEEVDRASSPDGTSANDLLQDEAFIVWMRLSAFRDFDKLYRIIDDDIPGGRSYFMRVNSSYPVIDFNGTKAFEISTVKWFGGRNPFLRTAYLIVG 236
            C ++  I +++ APSY YY L ++YQNAR Y  SRSD    G     + D+STC+P L K          D  E   PCGL A S FND+F+ C D +C +++ L + GIAW  D E +F  N  S  F +E            N+ ++DE F+VWMR +A+R++ KLYRII  D+  G  Y++++ S +PV  F+G K F IS   WFGG N  +  AYL+VG
Sbjct:  111 CVIKFNITRSVTAPSYFYYGLANFYQNARTYVTSRSDEQLRG---QDNPDISTCEP-LEKD---------DDGETLVPCGLVANSQFNDSFKMCFDADCDREVELNENGIAWDVDRETRFLGNNGS--FSQEE-----------NERIRDEDFMVWMRTAAYRNWKKLYRIIQTDLEPG-VYYVQIKSRFPVKSFDGQKFFFISETTWFGGPNRTMAIAYLVVG 307          
BLAST of Gcaud9258.t1 vs. uniprot
Match: A0A1X6NN03_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NN03_PORUM)

HSP 1 Score: 164 bits (416), Expect = 2.860e-44
Identity = 96/271 (35.42%), Postives = 127/271 (46.86%), Query Frame = 0
Query:   13 CTVEVFIEKTIRAPSYLYYSLTDYYQNARQYAKSRSDVMNMGVVPSVSLDVSTCDPWLYKPNT------------------------------SEGANGYDPTEIRYPCGLTAYSVFNDTFEFCEDRNCQQKINLRKKGIAWQTDVEHKFRPNEESELFKEEVDRASSPDGTSANDLLQDEAFIVWMRLSAFRDFDKLYRIIDDDIPGGRSYFMRVNSSYPVIDFNGTKAFEISTVKWFGGRNPFLRTAYLIVGIGHSLDPAIWMREHLEK 253
            C + + +   I+APSY YY +T   QNAR+Y KSRS     G  P  + ++  C P  Y  +T                              + G       ++  PCGLTA S FNDT E C D  C   I L   GIAW  D E  FRP              + P   + N  +  E F+VWMRLSAF DFDKLY II  D+P G +Y++ V S +PV  F GTK+  ++   WFGGRN FL   Y++VG+        ++  HL +
Sbjct:  156 CVLPLVVRSRIKAPSYFYYRVTGMQQNARRYVKSRSHKQLRGEWPLSADELRQCAPLTYVGDTLVNGGSVVDEEELDEDATAVSNASATPAAVAAGGGSRTQRQVLVPCGLTAASEFNDTLELCADNRCASPIPLSTDGIAWDADTEVAFRPRVP----------VAPPWTPAINARITSERFMVWMRLSAFADFDKLYGIIRSDLPPG-TYYIGVGSHFPVAPFGGTKSVFVANTTWFGGRNVFLGVTYVVVGLLCLAGGTAFLTYHLAR 415          
BLAST of Gcaud9258.t1 vs. uniprot
Match: L8HJG5_ACACA (Cell cycle control protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJG5_ACACA)

HSP 1 Score: 160 bits (406), Expect = 3.330e-44
Identity = 89/224 (39.73%), Postives = 125/224 (55.80%), Query Frame = 0
Query:   13 CTVEVFIEKTIRAPSYLYYSLTDYYQNARQYAKSRSDVMNMGVVPSVSLDVSTCDPWLYKPNTSEGANGYDPTEIRYPCGLTAYSVFNDTFEFCEDRNCQQKINLRKKGIAWQTDVEHKFRPNEESELFKEEVDRASSPDGTSANDLLQDEAFIVWMRLSAFRDFDKLYRIIDDDIPGGRSYFMRVNSSYPVIDFNGTKAFEISTVKWFGGRNPFLRTAYLIVG 236
            CTV + I++ +  P YLYY LT+YYQN R+Y KSR+D    G   +   D+  CDP      + +G++  D      PCGL A S FNDTF      N  + + L+KKGIAW +D++HKF+            +  S   G       +DE F+VWMR +    F KLYRII+ D+  G +Y + + ++YP   F+G K   +STV W GG+NPFL  AY++VG
Sbjct:   91 CTVTLDIKEKMEEPVYLYYKLTNYYQNHRRYVKSRNDQQLRGNKVTSKSDIEDCDP----VKSLDGSS--DKNNFFLPCGLIAKSYFNDTFALRYPNN--KLVPLKKKGIAWSSDLDHKFK------------NPGSDVPGIRVISDFEDEDFVVWMRTAGLPTFKKLYRIINTDLQPG-NYSVTIQNNYPTAKFDGKKYVVLSTVSWLGGKNPFLGIAYIVVG 293          
The following BLAST results are available for this feature:
BLAST of Gcaud9258.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUF6_9FLOR1.150e-12364.53ALA-interacting subunit 5 n=1 Tax=Gracilariopsis c... [more]
A0A1X6NZ39_PORUM6.620e-5140.63Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0G385_9RHOD1.670e-4739.60Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z203_PORPP6.450e-4741.30ALA-interacting subunit 1 n=1 Tax=Porphyridium pur... [more]
A0A7S3A940_9RHOD6.850e-4739.20Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
D3AWL9_POLPP3.820e-4641.41Uncharacterized protein n=1 Tax=Polysphondylium pa... [more]
F0Z9X8_DICPU1.420e-4540.76Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
A0A2V3J161_9FLOR1.040e-4441.07ALA-interacting subunit 5 n=1 Tax=Gracilariopsis c... [more]
A0A1X6NN03_PORUM2.860e-4435.42Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
L8HJG5_ACACA3.330e-4439.73Cell cycle control protein n=1 Tax=Acanthamoeba ca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005045CDC50/LEM3 familyPFAMPF03381CDC50coord: 9..239
e-value: 8.5E-63
score: 212.5
IPR005045CDC50/LEM3 familyPIRSFPIRSF015840Lem3/Cdc50coord: 1..253
e-value: 1.3E-59
score: 199.6
IPR005045CDC50/LEM3 familyPANTHERPTHR10926CELL CYCLE CONTROL PROTEIN 50coord: 10..237
NoneNo IPR availablePANTHERPTHR10926:SF0FI04422Pcoord: 10..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_7555_length_896_cov_9.499379contigNODE_7555_length_896_cov_9.499379:2..829 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9258.t1Gcaud9258.t1Gracilaria caudata M_176_S67 malemRNANODE_7555_length_896_cov_9.499379 2..829 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9258.t1 ID=Gcaud9258.t1|Name=Gcaud9258.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=258bp
XRNQTGGPTTVTCTVEVFIEKTIRAPSYLYYSLTDYYQNARQYAKSRSDV
MNMGVVPSVSLDVSTCDPWLYKPNTSEGANGYDPTEIRYPCGLTAYSVFN
DTFEFCEDRNCQQKINLRKKGIAWQTDVEHKFRPNEESELFKEEVDRASS
PDGTSANDLLQDEAFIVWMRLSAFRDFDKLYRIIDDDIPGGRSYFMRVNS
SYPVIDFNGTKAFEISTVKWFGGRNPFLRTAYLIVGIGHSLDPAIWMREH
LEKLNLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005045CDC50/LEM3_fam