Gcaud9256.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9256.t1
Unique NameGcaud9256.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length169
Homology
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BLAST of Gcaud9256.t1 vs. uniprot
Match: A0A2V3IYV6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYV6_9FLOR)

HSP 1 Score: 55.1 bits (131), Expect = 5.830e-6
Identity = 35/141 (24.82%), Postives = 67/141 (47.52%), Query Frame = 0 
Query:   30 KRFNCSITDYGPRAIRNYEHIVLKVYNLDEGSALILLPFILGDEMRDYCEQQVYPDVRDYQHGKAMKTLK--FHNNATQSRILDYPKKLRLSDFLDGNRSVGDAFDVLTEDMQANFARIPPYYRNDYFKRQLLISAVEGQE 168
            +RF+ +  ++    +  +E I  +   L +  AL  LP  L      +    +      Y+  KA+K L+  FH+   + RI    + +R   +LDG R++ +A+++L +D+   F ++   Y+ D F+R  L  A  G +
Sbjct:   47 QRFSGNDDEFWLDFLDRFELIAFECCKLSQSEALRFLPISLTGPALAFYRLNIKGKKLSYE--KAVKLLRKSFHDANRERRIWHRIRNVRFEMYLDGKRTISEAYELLIDDLHILFPQVAQAYQCDSFRRDSLERACVGHD 185
The following BLAST results are available for this feature:
BLAST of Gcaud9256.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYV6_9FLOR5.830e-624.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1123_length_13550_cov_4.406940contigNODE_1123_length_13550_cov_4.406940:4562..5068 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9256.t1Gcaud9256.t1Gracilaria caudata M_176_S67 malemRNANODE_1123_length_13550_cov_4.406940 4562..5068 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9256.t1 ID=Gcaud9256.t1|Name=Gcaud9256.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=169bp
MFRPRANDGQPPAMAIQKAAKFLTNLFKDKRFNCSITDYGPRAIRNYEHI
VLKVYNLDEGSALILLPFILGDEMRDYCEQQVYPDVRDYQHGKAMKTLKF
HNNATQSRILDYPKKLRLSDFLDGNRSVGDAFDVLTEDMQANFARIPPYY
RNDYFKRQLLISAVEGQE*
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