Gcaud9232.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9232.t1
Unique NameGcaud9232.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length353
Homology
BLAST of Gcaud9232.t1 vs. uniprot
Match: A0A2V3J607_9FLOR (Serine/threonine-protein phosphatase 4 regulatory subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J607_9FLOR)

HSP 1 Score: 508 bits (1308), Expect = 6.450e-163
Identity = 253/288 (87.85%), Postives = 272/288 (94.44%), Query Frame = 0
Query:   66 APALVRGESDVVSAALSPELHPNVDRFLPSEPDDRLIDIGSLEAIYSVQKMAEVLVSGADHEREFILFELQQLLDHCLDDTMKILLPVLCEHVPTWNIELQIKSAQRLYDVVALNLLPATANMITVASFGVIHRAKGIASPEYEELYHCWGNILVECLPNMQWTAQEIKDVIALVDIHATEQLYTSRKVAARVVGALAQCLDKQKVEHIILPRALRLFDDTDIEVRGMVVESLAQIGAALPIRVTENQVWPRIERLLEPPEEARLRATAMRTMAHILESHRGNGTPSR 353
            +P L+RGESDVVS+A SPELH + DRFLP+EPD+RL++I SL+AIYSVQKMAE+L++G D EREFILFELQQLLDHCLDDTMKIL+PVLCEHVPTWNIELQIKSAQRLYDVVAL+L P TANMIT ASFGVIHR KG ASPEYEELYHCWGNILVECLPNM+WTAQE+ DVIALVDIHA EQLYTSRKVAARVVGALAQCLDKQKVEH+ILPRAL LF+DTDIEVRGMVVESLAQIGAALP+RVTENQVWPRIERLLEPPEEARLRATAMRTMAHILESHR NGTPSR
Sbjct:  635 SPPLIRGESDVVSSAQSPELHAHTDRFLPAEPDERLMEIASLDAIYSVQKMAELLIAGPDTEREFILFELQQLLDHCLDDTMKILIPVLCEHVPTWNIELQIKSAQRLYDVVALHLEPPTANMITCASFGVIHRGKGKASPEYEELYHCWGNILVECLPNMRWTAQEVNDVIALVDIHAKEQLYTSRKVAARVVGALAQCLDKQKVEHVILPRALSLFEDTDIEVRGMVVESLAQIGAALPVRVTENQVWPRIERLLEPPEEARLRATAMRTMAHILESHRNNGTPSR 922          
BLAST of Gcaud9232.t1 vs. uniprot
Match: R7Q7M2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7M2_CHOCR)

HSP 1 Score: 249 bits (635), Expect = 2.810e-71
Identity = 118/166 (71.08%), Postives = 140/166 (84.34%), Query Frame = 0
Query:  188 MITVASFGVIHRAKGIASPEYEELYHCWGNILVECLPNMQWTAQEIKDVIALVDIHATEQLYTSRKVAARVVGALAQCLDKQKVEHIILPRALRLFDDTDIEVRGMVVESLAQIGAALPIRVTENQVWPRIERLLEPPEEARLRATAMRTMAHILESHRGNGTPSR 353
            MIT ASF VI  AKG A+PEY ELYH WG ILV+CLPNM+W+ QEI DVI LVD+HA E LYTSR++A RV+GALAQC D+ ++E +ILPR ++LF+D D+EVRG +VESLA +GAALPIR TE ++WPRIERLLEPPEE+RLRATAMRTMAHILESHR  G PS+
Sbjct:    1 MITCASFHVIQAAKGKAAPEYVELYHLWGGILVDCLPNMKWSNQEIADVITLVDVHAKEPLYTSRRIAGRVLGALAQCFDRNRIEKMILPRTVKLFEDGDVEVRGTIVESLASVGAALPIRYTETEIWPRIERLLEPPEESRLRATAMRTMAHILESHREKGGPSK 166          
BLAST of Gcaud9232.t1 vs. uniprot
Match: A0A1X6PA95_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PA95_PORUM)

HSP 1 Score: 243 bits (621), Expect = 1.310e-68
Identity = 125/244 (51.23%), Postives = 174/244 (71.31%), Query Frame = 0
Query:  106 SLEAIYSVQKMAEVLVSGADHEREFILFELQQLLDHCLDDTMKILLPVLCEHVPTWNIELQIKSAQRLYDVVALNLLPATANMITVASFGVIHRAKGIASPEYEELYHCWGNILVECLPNMQWTAQEIKDVIALVDIHATEQ-LYTSRKVAARVVGALAQCLDKQKVEHIILPRALRLFDDTDIEVRGMVVESLAQIGAALPIRVTENQVWPRIERLLEP--PEEARLRATAMRTMAHILESHR 346
            +++AIYSVQKMAEVL +G D ER+FILFE+QQ+LDHCL DT++IL+PVLCE VP W++ELQ+K+A+RL+DVV+L L  A A+MIT ASF V+  A+   + + E++Y  WG +LV+ +P ++W A E+   +A +D HA  +    +RK+AAR +GALAQCL    VE  +LPR L L  D    VRG VVESLA +GA +P      ++WPR   +L+   PEE ++RATA+R++AH+LE  R
Sbjct:   61 NMDAIYSVQKMAEVLEAGPDTERDFILFEMQQMLDHCLSDTLRILVPVLCELVPQWSVELQLKAAERLFDVVSLQLPAAVASMITSASFAVVASARHATAEDIEDVYTLWGGVLVDAMPTVEWAAGELATALATLDAHARSRGSEPARKLAARALGALAQCLPAASVEAQLLPRVLALAADESAAVRGTVVESLAFLGATMPTDHVAERIWPRFVAVLDEGSPEEPQVRATALRSVAHVLEKQR 304          
BLAST of Gcaud9232.t1 vs. uniprot
Match: A0A7S0ZIT7_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZIT7_9RHOD)

HSP 1 Score: 210 bits (534), Expect = 1.460e-60
Identity = 111/243 (45.68%), Postives = 162/243 (66.67%), Query Frame = 0
Query:  108 EAIYSVQKMAEVLVSGADHEREFILFELQQLLDHCLDDTMKILLPVLCEHVPTWNIELQIKSAQRLYDVVALNLLPATANMITVASFGVIHRAKGIASPEYEELYHCWGNILVECLPNMQWTAQEIKDVIALVDIHATEQLYTSRKVAARVVGALAQCLDKQKVEHIILPRALRLFDDTDIEVRGMVVESLAQIGAALPIRVTENQVWPRIERLLEPPEEARLRATAMRTMAHILESHRGNGT 350
            EA++SV +MA+VL +G D +++ +L+E+Q LLDHC +DT+KIL+PVLC +V  WN ELQ+ +A+ L +VV   +    A MI+ ASF V+  A        + +Y  WG ILV  LP++ W+ +E+  V+ALVD HA      SRK+AARV GAL+  L   KV  +IL R L+L +D D+EVRGM  ESLA +G+ +P  +  N +WP + +L+E  + AR+RA A+R++A +LES R +GT
Sbjct:   28 EALFSVSRMADVLETGNDTKKQGVLYEMQSLLDHCFEDTLKILVPVLCLYVHEWNHELQLVAAESLLEVVHKKIPADVAKMISAASFRVVKSAT------IDTIYESWGEILVAVLPSVSWSEEEMTRVLALVDAHANRTSEVSRKLAARVYGALSLSLAPDKVNDLILSRTLKLCNDPDVEVRGMSTESLAFLGSMVPSSILRNVLWPELSKLMED-QNARIRAAALRSVARVLESERNSGT 263          
BLAST of Gcaud9232.t1 vs. uniprot
Match: A0A5J4ZB00_PORPP (Serine/threonine-protein phosphatase 4 regulatory subunit 4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZB00_PORPP)

HSP 1 Score: 216 bits (551), Expect = 5.480e-60
Identity = 115/239 (48.12%), Postives = 161/239 (67.36%), Query Frame = 0
Query:  108 EAIYSVQKMAEVLVSGADHEREFILFELQQLLDHCLDDTMKILLPVLCEHVPTWNIELQIKSAQRLYDVVALNLLPATANMITVASFGVIHRAKGIASPEYEELYHCWGNILVECLPNMQWTAQEIKDVIALVDIHATEQLYTSRKVAARVVGALAQCLDKQKVEHIILPRALRLFDDTDIEVRGMVVESLAQIGAALPIRVTENQVWPRIERLLEPPEEARLRATAMRTMAHILESHR 346
            EA++SV KMA++L  G++ ++  ++ E+QQ LDHCL+DT+++L+PVLC HV  W+ ELQI +A+ L +VV   + PATA MI+ ASF V+  A        + +Y  WG ILV  LPN+ W+  E+  V++L+D HA      SRK+AARV+G+++ C+  ++V   ILPRALRL  D DIEVRGM  ESLA IG+AL     E  VW +IE LL     AR+RA ++R+MA ILE+HR
Sbjct:   38 EALFSVGKMADILEHGSEAKKNVVMMEIQQFLDHCLEDTLQVLVPVLCLHVHEWSHELQIAAAEALLEVVNKTIPPATAKMISAASFRVVKLAM------VDTIYESWGEILVSVLPNVSWSDDELVRVLSLIDAHANRSSEVSRKLAARVIGSMSLCVTPEQVGQFILPRALRLCQDKDIEVRGMSTESLAFIGSALDQPTVETVVWEQIETLLNDAN-ARIRAASLRSMARILENHR 269          
BLAST of Gcaud9232.t1 vs. uniprot
Match: A0A7S3EF66_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EF66_9RHOD)

HSP 1 Score: 211 bits (537), Expect = 4.660e-58
Identity = 106/239 (44.35%), Postives = 160/239 (66.95%), Query Frame = 0
Query:  108 EAIYSVQKMAEVLVSGADHEREFILFELQQLLDHCLDDTMKILLPVLCEHVPTWNIELQIKSAQRLYDVVALNLLPATANMITVASFGVIHRAKGIASPEYEELYHCWGNILVECLPNMQWTAQEIKDVIALVDIHATEQLYTSRKVAARVVGALAQCLDKQKVEHIILPRALRLFDDTDIEVRGMVVESLAQIGAALPIRVTENQVWPRIERLLEPPEEARLRATAMRTMAHILESHR 346
            EA+  V KMAE+L +G DHER  +LFE QQ+LD+C +DT++IL+P++C HV TW+  LQ+ +A+ L D+V  +L P  + M++ ASF V++R         + ++ CW  ILV  LPN+ W  QE+  VI+L+++HA+     SRK+AAR++GAL+  L    VE +I+ RAL L  D ++EVRGM  ESL  IG+ +P+ V + ++WP+I +L   P   R+RA  +R +AHI+E+HR
Sbjct:   76 EALICVNKMAEMLENGNDHERSIVLFEFQQMLDYCFEDTLEILVPIICLHVHTWSSGLQLATAEALIDLVRHDLTPDVSKMVSAASFRVVNRVIA------DTVHECWSEILVMVLPNVNWNEQELARVISLINVHASRTSDASRKLAARLLGALSMSLSAADVEKLIVHRALYLCSDKNVEVRGMAAESLDHIGSKVPLAVMKERLWPKIVQLFRDPH-VRIRAATLRCIAHIVEAHR 307          
BLAST of Gcaud9232.t1 vs. uniprot
Match: A0A7S1TKG3_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKG3_9RHOD)

HSP 1 Score: 210 bits (534), Expect = 1.040e-57
Identity = 116/242 (47.93%), Postives = 160/242 (66.12%), Query Frame = 0
Query:  108 EAIYSVQKMAEVLVSGADHEREFILFELQQLLDHCLDDTMKILLPVLCEHVPTWNIELQIKSAQRLYDVVALNLLPATANMITVASFGVIHRAKGIASPEYEELYHCWGNILVECLPNMQWTAQEIKDVIALVDIHATEQLYTSRKVAARVVGALAQCLDKQKVEHIILPRALRLFDDTDIEVRGMVVESLAQIGAALPIRVTENQVWPRIERLLEPPEEARLRATAMRTMAHILESHRGNG 349
            EA++SV +MAEVL SG D +R  +L E+QQLLDHCL+DT+KIL+PVLC HV  W ++LQ+ +A+ L DVV   +    A MI+ ASF V+  A        + +Y  WG ILV  LP + W+ +E+  V+AL+D HA      SRK+AARVVGA++ CL+  +VE  I+ R LRL  D D+EVRGM  ESLA +GA +   V  +Q+WP++ RLLE    +R+RA  +R++A ILE+ R  G
Sbjct:   70 EALFSVGRMAEVLESGNDGKRGVVLMEMQQLLDHCLEDTLKILVPVLCLHVHEWVVDLQLAAAEALLDVVHKVIPADVAKMISAASFRVVKTAT------VDTVYESWGEILVAVLPAVSWSDEELIRVLALIDAHANRSSEVSRKLAARVVGAMSLCLEPTQVETHIMTRTLRLCADNDVEVRGMSTESLAFVGARVSKEVLSDQIWPQLARLLED-YSSRIRAATLRSIARILEAGRNAG 304          
BLAST of Gcaud9232.t1 vs. uniprot
Match: A0A5J4Z880_PORPP (Serine/threonine-protein phosphatase 4 regulatory subunit 4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z880_PORPP)

HSP 1 Score: 177 bits (450), Expect = 7.170e-46
Identity = 106/282 (37.59%), Postives = 155/282 (54.96%), Query Frame = 0
Query:  109 AIYSVQKMAEVLVSGADHEREFILFELQQLLDHCLDDTMKILLPVLCEHVPTWNIELQIKSAQRLYDVVALNLLPATANMITVASFGVIHRAKGIASPEYEELYHCWGNILVECLPNMQWTAQEIKDVIALVDIHATEQLYTSRKVAARVVGALA------------------------------QCLDKQKV--------------EHIILPRALRLFDDTDIEVRGMVVESLAQIGAALPIRVTENQVWPRIERLLEPPEEARLRATAMRTMAHILESHR 346
            +++S+ KMAE+L  G + +R F+L ELQQL DHCL DT+ +LLP LC HV  W  ELQ+ +A+ L D+  L L P  A MIT A+F V+  +  +A      ++  WG ILV  LP   W  +E+  ++AL+D HA      SRK+AARV+GAL+                              +C+    V              E  ++PR L+L  D+DIEV+GM  ESLA +G+ALP+    + +W  I  LL+  E AR+RA  +R++AHI+++H+
Sbjct:  107 SLFSITKMAELLRDGTEQQRSFVLVELQQLFDHCLMDTLNVLLPALCAHVHEWAPELQVAAAEALLDITHLALPPLVAKMITAAAFRVVQTSTRLA------IFEAWGEILVATLPLAVWNKEELLHIVALIDSHAARSSLASRKLAARVLGALSLVGASRKASDSDVDHSGLVVVGHAKSESDLRCVSDASVLQPEPVRVESYALIETSVVPRVLKLAFDSDIEVQGMSTESLAFVGSALPLPRVYSLLWSTICALLDSCE-ARIRAATLRSVAHIVQAHK 381          
BLAST of Gcaud9232.t1 vs. uniprot
Match: A0A1X6NLD9_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLD9_PORUM)

HSP 1 Score: 170 bits (430), Expect = 6.050e-44
Identity = 107/280 (38.21%), Postives = 147/280 (52.50%), Query Frame = 0
Query:   98 DDRLIDIGSLEAIYSVQKMAEVLVSGADHEREFILFELQQLLDHCLDDTMKILLPVLCEHVPTWNIELQIKSAQRLYDVVALNLLP-ATANMITVASFGVIHRAK------------------------GIASPEYEELYHCWGNILVECLPNMQWTAQEIKDVIALVDIHATEQLYTSRKVAARVVGALAQCLDK-QKVEHIILPRALRLFDDTDIEVRGMVVESLAQIGAALPIRVTENQVWPRIERLLEPPEEARLRATAMRTMAHILESHRGNGTP 351
            DD L D    +A++++ KMA VL  G+D E+  +LFE+ QLLDHCL DT+  L+P +C  V TW I ++  +A+ L DV     LP ATA +I   +   I   K                        G       E+ + W  IL   L  ++W   E++ V  L+D HA+     SRK+AARV+G+LA  +D  Q VE  +LP AL L DD  +EVRGMV ESLA +   + +R  E  VWPR   LL  P+ AR+ A  +RT+AH+   H    TP
Sbjct:   31 DDELAD----DALFNIDKMATVLADGSDDEKTVVLFEMAQLLDHCLADTLATLVPAICGLVATWPIHVRASAAEALLDVAHQPELPHATAKLIAQTALDAIDPGKTGPERCSVDAVSAQPSASQSGCVDGAQENSSGEVLNLWAEILSAVLRQVKWDRDELQAVTGLIDYHASNHRDGSRKLAARVLGSLATAIDSGQDVEQYVLPTALTLCDDVAVEVRGMVSESLALVAGRVSLRTLEQVVWPRAVSLLADPD-ARVHAATLRTVAHVAVQHAEPYTP 305          
BLAST of Gcaud9232.t1 vs. uniprot
Match: A0A7S0BS56_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BS56_9RHOD)

HSP 1 Score: 151 bits (382), Expect = 1.300e-40
Identity = 78/187 (41.71%), Postives = 122/187 (65.24%), Query Frame = 0
Query:  160 TWNIELQIKSAQRLYDVVALNLLPATANMITVASFGVIHRAKGIASPEYEELYHCWGNILVECLPNMQWTAQEIKDVIALVDIHATEQLYTSRKVAARVVGALAQCLDKQKVEHIILPRALRLFDDTDIEVRGMVVESLAQIGAALPIRVTENQVWPRIERLLEPPEEARLRATAMRTMAHILESHR 346
            TW+  LQ+ +A+ L D+V  +L P  + M++ ASF V++R         + ++ CW  ILV  LPN+ W  QE+  VI+LV++HA+     SRK+AAR++GAL+  L  + VE +I+ RAL L  D ++EVRGM  ESL  IG+ +P++V + ++WP+I +L   P+  R+RA  +R +AHI+E+HR
Sbjct:    1 TWSSGLQLATAEALIDLVRHDLTPDVSKMVSAASFRVVNRVIA------DTVHECWSEILVMVLPNVNWNEQELARVISLVNVHASRTSDASRKLAARLLGALSMSLPAEDVEKLIVHRALYLCSDKNVEVRGMGAESLDHIGSKVPLKVMKERLWPKIVQLFRDPD-VRIRAATLRCIAHIVEAHR 180          
The following BLAST results are available for this feature:
BLAST of Gcaud9232.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A2V3J607_9FLOR6.450e-16387.85Serine/threonine-protein phosphatase 4 regulatory ... [more]
R7Q7M2_CHOCR2.810e-7171.08Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6PA95_PORUM1.310e-6851.23Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0ZIT7_9RHOD1.460e-6045.68Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4ZB00_PORPP5.480e-6048.12Serine/threonine-protein phosphatase 4 regulatory ... [more]
A0A7S3EF66_9RHOD4.660e-5844.35Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1TKG3_9RHOD1.040e-5747.93Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A5J4Z880_PORPP7.170e-4637.59Serine/threonine-protein phosphatase 4 regulatory ... [more]
A0A1X6NLD9_PORUM6.050e-4438.21Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A7S0BS56_9RHOD1.300e-4041.71Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 106..350
e-value: 8.3E-14
score: 53.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..53
IPR021133HEAT, type 2PROSITEPS50077HEAT_REPEATcoord: 275..313
score: 10.3205
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 82..348

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_6242_length_1240_cov_3.831158contigNODE_6242_length_1240_cov_3.831158:32..1240 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9232.t1Gcaud9232.t1Gracilaria caudata M_176_S67 malemRNANODE_6242_length_1240_cov_3.831158 32..1240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9232.t1 ID=Gcaud9232.t1|Name=Gcaud9232.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=353bp
MPPPDASTRPPPPMRMPPRRPSSPRQPEQSRPDSPAPVLRPDSPVPHHRP
DSPLPLPLQQHGAQPAPALVRGESDVVSAALSPELHPNVDRFLPSEPDDR
LIDIGSLEAIYSVQKMAEVLVSGADHEREFILFELQQLLDHCLDDTMKIL
LPVLCEHVPTWNIELQIKSAQRLYDVVALNLLPATANMITVASFGVIHRA
KGIASPEYEELYHCWGNILVECLPNMQWTAQEIKDVIALVDIHATEQLYT
SRKVAARVVGALAQCLDKQKVEHIILPRALRLFDDTDIEVRGMVVESLAQ
IGAALPIRVTENQVWPRIERLLEPPEEARLRATAMRTMAHILESHRGNGT
PSR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR021133HEAT_type_2
IPR016024ARM-type_fold