Gcaud9230.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9230.t1
Unique NameGcaud9230.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length346
Homology
BLAST of Gcaud9230.t1 vs. uniprot
Match: B7FY87_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FY87_PHATC)

HSP 1 Score: 142 bits (357), Expect = 8.660e-36
Identity = 79/183 (43.17%), Postives = 106/183 (57.92%), Query Frame = 0
Query:    3 DAAARLAVACALALKLPLNHFAKSVRKLDLATMRMMHYPACHFVAGQSNGDDETSSIRFGEHRDLGFFTFLFCDSGG---LQVKR-ERDELAQHEGNE---WMDVPVPAQGC--AVVMIGRLAARVTNDAWIAPLHRVVVRDGDAASKSRYALAYFHEPDKGSVIETHPSFVAEGEAPGYEPI 176
            D A R A+ACALAL LPL+ FA ++  LDL T+R +HYPAC      ++ +     IR GEH D G FTFL     G   LQ+K  E  E     G E   W+DV +P  G   A+V  G L AR TND W A  HRV+V + + A++ R+++A+F +PD  S+++ H +F   G  P YEPI
Sbjct:  141 DLARRYAIACALALSLPLDFFANALVDLDLCTIRFLHYPACEL--DDTSAESTDRPIRIGEHTDFGAFTFLLLGENGVEGLQIKPVEGGEAGGQAGGENEGWIDVVLPNDGPQGAIVNTGALMARWTNDVWRATAHRVIVANAEMAARERFSIAFFVDPDSNSIVKVHDTFTKHGSLPKYEPI 321          
BLAST of Gcaud9230.t1 vs. uniprot
Match: C1EBA5_MICCC (Fe2OG dioxygenase domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EBA5_MICCC)

HSP 1 Score: 129 bits (324), Expect = 7.110e-31
Identity = 78/189 (41.27%), Postives = 106/189 (56.08%), Query Frame = 0
Query:    4 AAARLAVACALALKLPLNH---FAKSVRKLDLATMRMMHYPACHFVAGQSNGDDETSSIRFGEHRDLGFFTFLFCDS----GGLQVKRERDELA------QHEGNEWMDVPVPAQGCAVVMIGRLAARVTNDAWIAPLHRVVVRDGDAASKSRYALAYFHEPDKGSVIETHPSFVAE-GEAPGYEPIRA 178
            AA R+AVACALAL+LP +    F ++ + +D  T++ +H+P     A   N DD  + +R GEH D G  T LF DS     GLQVK+   +        + +G EWM+ P      AVV  G L AR TND W A  HRVV    + A + RY++A+F +PDK ++IETHP+ +A  G    Y PI A
Sbjct:  143 AARRIAVACALALELPSDDSRFFERNFQVVDQCTLQFLHFPPVD-AAAAVNDDDIATQLRVGEHTDFGMVTLLFHDSVVNGAGLQVKKAATDQVGGAAGGEFDGAEWMEAPGRGGATAVVNTGALMARWTNDEWRATAHRVVAGPPEVAVRDRYSIAFFFDPDKDAIIETHPACLARTGREARYAPISA 330          
BLAST of Gcaud9230.t1 vs. uniprot
Match: C1E0P9_MICCC (Fe2OG dioxygenase domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1E0P9_MICCC)

HSP 1 Score: 119 bits (299), Expect = 2.440e-27
Identity = 77/194 (39.69%), Postives = 108/194 (55.67%), Query Frame = 0
Query:    1 MSDAAARLAVACALALKLP---LNHFAKSVRKLDLATMRMMHYPACH-FVAGQSNGDDETSSIRFGEHRDLGFFTFLFCDSG----GLQVKRERDELAQHEGNE-------WMDVPVPAQGCAVVMIGRLAARVTNDAWIAPLHRVVVRDGDAASKSRYALAYFHEPDKGSVIETHPSFVAEGEAPGYEPIRAG 179
            + +A+ RL +ACALA+KLP   +  F ++ R+ D +T+RM+H+P    F   +   D +  ++R GEH D G  T LF D+     GLQVK+  D  A ++ +        W+D        A+V  G L AR TND W A  HRVVV +  AA + RY+LA+F +PDK  VIETHP F        Y+PI +G
Sbjct:  144 LEEASRRLFIACALAMKLPREDMRFFERTFRRFDFSTLRMLHFPPVEDFSPDKLTRDGD--ALRIGEHTDFGMVTLLFHDAESAGEGLQVKKA-DAGAGNDASGVAGTNTGWIDAISRGGATAIVNTGALIARWTNDEWRATAHRVVVPNDAAAGRDRYSLAFFLDPDKDEVIETHPRF--SDAVDKYKPITSG 332          
BLAST of Gcaud9230.t1 vs. uniprot
Match: A0A1E7FXT4_9STRA (Clavaminate synthase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXT4_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.430e-22
Identity = 67/179 (37.43%), Postives = 90/179 (50.28%), Query Frame = 0
Query:    1 MSDAAARLAVACALALKLPLNHFAKSVRKLDLATMRMMHYPACHF------VAGQSNGDDETSSIRFGEHRDLGFFTFLFCDSG----GLQVKR-----ERDELAQHEGNEWMDVPVPAQGCAVVMIGRLAARVTNDAWIAPLHRVVVRDGDAASKSRYALAYFHEPDKGSVIETHPSF 164
            M  AA R  +ACALAL LP++ F K++   D  T R +HYP C F          +N D E   IR  EH D G +TFL         GLQVK      E   +A    +E  + P  A    ++  G + AR+TND W A  HRV+V   + ASK RY++A+F +PD   +IE    +
Sbjct:  147 MKVAAIRYGMACALALDLPIDFFTKTLNTFDSVTSRFLHYPPCDFHNITQTATTTNNNDKELPPIRVSEHTDFGCYTFLLLRGNQGPMGLQVKPGQRGGEIGGIAGEHDDEEEEEPFGA----IINTGAMMARMTNDYWKATPHRVIVPSAELASKHRYSIAFFVDPDSHELIEVDEKY 321          
BLAST of Gcaud9230.t1 vs. uniprot
Match: A0A7S2M2R7_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2M2R7_9DINO)

HSP 1 Score: 101 bits (251), Expect = 1.760e-22
Identity = 54/115 (46.96%), Postives = 70/115 (60.87%), Query Frame = 0
Query:   67 LGFFTFLFCD--SGGLQVKR--ERDEL--AQHEGNEWMDVPVPAQGCAVVMIGRLAARVTNDAWIAPLHRVVVRDGDAASKSRYALAYFHEPDKGSVIETHPSFVAEGEAPGYEP 175
             G FTFL  D  + GLQVK+  E D L   Q     W+D P      A+V  G L A+VTND W A  HRV+V D + A+  RY++ +F +PD+G+VI+ HPSFV EGE P Y+P
Sbjct:    1 FGLFTFLCLDGEAPGLQVKKACEGDALKVVQSGAGAWIDAPGRGGAIAIVNSGSLIAQVTNDLWRATAHRVIVPDAEQAAMHRYSMPFFVQPDRGAVIQAHPSFVPEGEKPHYQP 115          
BLAST of Gcaud9230.t1 vs. uniprot
Match: A0A8J3WX89_9ACTN (Uncharacterized protein n=2 Tax=Planobispora takensis TaxID=1367882 RepID=A0A8J3WX89_9ACTN)

HSP 1 Score: 104 bits (259), Expect = 8.710e-21
Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 0
Query:  241 GLLTEVQLFLDEIPIPPSKFNFDEHDRLLTWNKAYGGGRLFLSHDGTIAHGSVGRMRNAATFEAGATARFTCDVAENVGATFESMGDTNIKIDWDPDCEQWKNAN 345
            G   E QLFLD++PIP   +++D HDR+LTW  AYGGG L +SHDG   +G++G   +  +  A A A+FTCDVA N GA++ES G +   + WD    +W NAN
Sbjct:   23 GRHDEDQLFLDQLPIPRDAWSYDPHDRMLTWGGAYGGGHLQISHDGLGGYGNIGSAVDFCSVTASARAQFTCDVALNCGASYESSGGSITGMKWDTASAEWTNAN 127          
BLAST of Gcaud9230.t1 vs. uniprot
Match: A0A6I8LN51_9PSEU (Uncharacterized protein n=1 Tax=Amycolatopsis sp. A23 TaxID=2606593 RepID=A0A6I8LN51_9PSEU)

HSP 1 Score: 104 bits (259), Expect = 8.720e-21
Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:  245 EVQLFLDEIPIPPSKFNFDEHDRLLTWNKAYGGGRLFLSHDGTIAHGSVGRMRNAATFEAGATARFTCDVAENVGATFESMGDTNIKIDWDPDCEQWKNA 344
            E QLFLD +PIP   +++D HDR+LTW  A+GGG L LSHDG+ AHG+VG   +  +  AGA A+F CDVA   GAT+E+ G   + + WDP    W+ A
Sbjct:   41 EDQLFLDRLPIPRDAWDYDAHDRVLTWRGAFGGGHLRLSHDGSGAHGTVGPEDDLCSVTAGARAQFACDVALGCGATYETSGGAVVGLLWDPKSPAWEGA 140          
BLAST of Gcaud9230.t1 vs. uniprot
Match: A0A7S2ULZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULZ9_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.460e-20
Identity = 57/132 (43.18%), Postives = 78/132 (59.09%), Query Frame = 0
Query:    9 AVACALALKLPLNHFAKSVRKLDLATMRMMHYPACHFVAGQSNGDDETSSIRFGEHRDLGFFTFLFCD---SGGLQVKR-ERDELAQHEGNE---WMDVPVPAQGCAVVMIGRLAARVTNDAWIAPLHRVVV 133
            A+ACALAL LP++ F K+++++ L T+R +HYP C F  G ++ +      R GEH D G +TFL      + GLQ+K  E  E+    G E   W+DV VP  G A++  G L AR TND W A  HRV+V
Sbjct:    2 ALACALALGLPVDFFLKTLQEMSLCTIRFLHYPPCEF--GATSIEQINMPTRIGEHTDFGCYTFLLLGEHGAEGLQIKPIEGGEIGGLSGGEEGGWIDVVVPRNG-AIINTGALMARWTNDEWRATAHRVIV 130          
BLAST of Gcaud9230.t1 vs. uniprot
Match: E6WND8_PANSA (Uncharacterized protein n=2 Tax=Pantoea sp. (strain At-9b) TaxID=592316 RepID=E6WND8_PANSA)

HSP 1 Score: 87.8 bits (216), Expect = 3.050e-15
Identity = 49/140 (35.00%), Postives = 80/140 (57.14%), Query Frame = 0
Query:  206 PNLNELTVHSVCARHSNQVSAPSVISII-PVAFSLAGLLTEVQLFLDEIPIPPSKFNFDEHDRLLTWNKAYGGGRLFLSHDGTIAHGSVGRMRNAATFEAGATARFTCDVAENVGATFESMGDTNIKIDWDPDCEQWKNA 344
            P +  L++  +   +++Q   PS+++++ PV    A    + QLF+D +P+P   +++D  DR+L+W  AYGGGR+ L H G    G++G   ++A+  A +TA F+CDVA N GA +E+ G       WDP    W  A
Sbjct:   29 PEVINLSLSRMNIFNNSQREIPSLVTLLRPVPQDPA----QDQLFIDHLPLPRDAWHYDNKDRVLSWRGAYGGGRINLVHAGHGGLGTIGSANDSASVYASSTANFSCDVALNCGAIYETSGGNVTGFRWDPASPAWTQA 164          
BLAST of Gcaud9230.t1 vs. uniprot
Match: A0A1Q9LNJ2_9PSEU (Oxidoreductase n=1 Tax=Actinokineospora bangkokensis TaxID=1193682 RepID=A0A1Q9LNJ2_9PSEU)

HSP 1 Score: 84.0 bits (206), Expect = 1.610e-14
Identity = 59/181 (32.60%), Postives = 91/181 (50.28%), Query Frame = 0
Query:    1 MSDAAARLAVACALALKLPLNHFAKSVRKLDLATMRMMHYPACHFVAGQSNGDDETSSIRFGEHRDLGFFTFLFCDS--GGLQVKRERDELAQHEGNEWMDVPVPAQGCAVVMIGRLAARVTNDAWIAPLHRVVVRDGDAASKSRYALAYFHEPDKGSVIETHPSFVAEGEAPGYEPIRAG 179
            M + A  L    ALAL LP   F   V +  +  +   +YPA            +   +R G+H D G  T L+ D   GGLQV          +  EW+DVP   +G  VV IG L A  TN+ W++ +HRVV    + A++ RY++ +FH+P+  ++IE  P+  +  + P + P+R+G
Sbjct:  170 MQELALELMRLFALALDLPEGWFDDKVDE-HMTNLTANYYPA-------QLVPPKPGQLRKGQHSDWGSLTILYQDDAPGGLQVL--------DKAGEWVDVPA-IEGSFVVNIGDLMAVWTNNRWVSTVHRVVNPAPEVATRERYSVPFFHQPNFDALIECIPTCTSLQDPPRHAPVRSG 333          
The following BLAST results are available for this feature:
BLAST of Gcaud9230.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B7FY87_PHATC8.660e-3643.17Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
C1EBA5_MICCC7.110e-3141.27Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
C1E0P9_MICCC2.440e-2739.69Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
A0A1E7FXT4_9STRA1.430e-2237.43Clavaminate synthase-like protein n=1 Tax=Fragilar... [more]
A0A7S2M2R7_9DINO1.760e-2246.96Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
A0A8J3WX89_9ACTN8.710e-2147.62Uncharacterized protein n=2 Tax=Planobispora taken... [more]
A0A6I8LN51_9PSEU8.720e-2150.00Uncharacterized protein n=1 Tax=Amycolatopsis sp. ... [more]
A0A7S2ULZ9_9STRA1.460e-2043.18Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
E6WND8_PANSA3.050e-1535.00Uncharacterized protein n=2 Tax=Pantoea sp. (strai... [more]
A0A1Q9LNJ2_9PSEU1.610e-1432.60Oxidoreductase n=1 Tax=Actinokineospora bangkokens... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027443Isopenicillin N synthase-like superfamilyGENE3D2.60.120.330coord: 1..190
e-value: 7.3E-42
score: 146.0
IPR044861Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domainPFAMPF031712OG-FeII_Oxycoord: 37..152
e-value: 6.2E-10
score: 39.5
NoneNo IPR availablePANTHERPTHR479902-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATEDcoord: 4..176
NoneNo IPR availablePANTHERPTHR47990:SF34IRON/ASCORBATE OXIDOREDUCTASE DDB_G0283291-RELATEDcoord: 4..176
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..345
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 1..178
IPR005123Oxoglutarate/iron-dependent dioxygenasePROSITEPS51471FE2OG_OXYcoord: 31..152
score: 10.63101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_992_length_15404_cov_5.256383contigNODE_992_length_15404_cov_5.256383:9187..13712 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9230.t1Gcaud9230.t1Gracilaria caudata M_176_S67 malemRNANODE_992_length_15404_cov_5.256383 9187..13712 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9230.t1 ID=Gcaud9230.t1|Name=Gcaud9230.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=346bp
MSDAAARLAVACALALKLPLNHFAKSVRKLDLATMRMMHYPACHFVAGQS
NGDDETSSIRFGEHRDLGFFTFLFCDSGGLQVKRERDELAQHEGNEWMDV
PVPAQGCAVVMIGRLAARVTNDAWIAPLHRVVVRDGDAASKSRYALAYFH
EPDKGSVIETHPSFVAEGEAPGYEPIRAGCRQSTMTTEASFAIAKAIRNH
VRTKYPNLNELTVHSVCARHSNQVSAPSVISIIPVAFSLAGLLTEVQLFL
DEIPIPPSKFNFDEHDRLLTWNKAYGGGRLFLSHDGTIAHGSVGRMRNAA
TFEAGATARFTCDVAENVGATFESMGDTNIKIDWDPDCEQWKNAN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027443IPNS-like_sf
IPR044861IPNS-like_FE2OG_OXY
IPR005123Oxoglu/Fe-dep_dioxygenase