Gcaud9228.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9228.t1
Unique NameGcaud9228.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length763
Homology
BLAST of Gcaud9228.t1 vs. uniprot
Match: A0A2V3ITS4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITS4_9FLOR)

HSP 1 Score: 1033 bits (2671), Expect = 0.000e+0
Identity = 549/756 (72.62%), Postives = 652/756 (86.24%), Query Frame = 0
Query:    1 MVATRILDEALRGGEPARLLEQRCLASLRKAEEEVREAVATAPEFISDSKTKHETLLSSAADINTMIEMLGESLDEVTQRTQQMNERSQLYSKKKEVLDLLSVEIIPFVRVAQALEVSDRIAEASFPQLQQAISQLQDTANVALXXXXXXXXXXXXXXXXXXDEATALLKARYMDTFEVRSNSIIARGHTHASSNMNSISVDTSSAALAQAGMLEEAIQGIIRELTRNQVAKSLAQATVFFESSTDHSVNLEWSTGVDDSAELLEFDVDDLETVSEDDIDVMSQHLDISNTAARALRIYDVFRNHVVGPEFSRPLAVAMQPWFAAQILPSSVVVNSLRTTTNDTVPSDMLRSRIMTACACAKILQEAMRARGATSFTISLDRNILEEATGAECRAQAVLKARTVIGSFSEARHDDNEMVECPLAATEYLPRSERPPDYFPPCLVTRTAKTVHDVFLSTRMDAEKAIRSGSASIGNALNAAALECLQAYRDDVPIQHSSEIRASLRLKALYYNDCLMLAHACRQSLEKFGLSDGLENQKRLLEEAANKVMVIVRRTAEQRLIENLNAACRNGSLGAYGTLTRIQRSSALSGAFNAMREVIHVFSEIVPTELAEIAAATLLQKYLTILMNEVIALPEISADGCEQINSILRDANNNVISLMSSVKSMERLRGNADPPEIVSQLRRSQQKLETVCEILSARMEDIAQSYRAGKYNGLISRIEVEHFLKAIFEDTPLRSGFIADLDISLEQESQEWENSN 756
            MVAT+ILDEALRGGEPAR LEQRCLASL +AE EV+EA+++AP FI++SK+KH  LL++A ++N MIEMLGESLDE+T+RTQQMNERS+L S +KE LD LS E++PFV+VA+AL+VSD I+EASFP+LQ +I+QL  TA +A      XXXXXXXXXX   DEATA++KARYMDT+EVR NSIIARGH  +S ++N  + D SS ALA+AGML++AIQGI+ EL RNQVA  LAQATV FES +D +  LEWS+GVDDSAELLEFD+DDLETVSEDDID+M+QHLDISN AARALRIYDVFR+HVVGP+FSR LAVAMQPWF   +LPSS++ +S R + + +VP +MLRSR+MT  ACA+++QEA+RARGATSF + LD + LE   GAECRAQAVL AR  IG+F++ARHDD+EMVECPL+AT Y+P SER  DYFPPCLVTR A TV D+FLSTRMDA KA +SGS +IG+ALNAA++ECL+AYR+DVP+QH+SE+RASLRLKALYYNDCLMLAH+CR+S ++ G  + L+ QKR LEEAANKVM+IVRRTAEQRL+ENLNAACRNG+LGAYGTLTRIQRSSALSGA+NAMREV+HVFSEIVPTELAEIAA+TLLQKYL ILM EV+AL EISADGCEQI+ IL DA+NNV +LM +VKSME LRGNA PP IV QLR SQQ+L  + EIL+ARMEDI ++YR GKYN +ISR EVEHF+KAIFEDTPLRSGFIADLD+SLEQESQEWENSN
Sbjct:    1 MVATKILDEALRGGEPARALEQRCLASLHRAESEVKEALSSAPAFIAESKSKHILLLTNADEVNAMIEMLGESLDEITKRTQQMNERSRLDSLRKEALDDLSAELVPFVKVAEALQVSDSISEASFPELQLSITQLHRTAALASESGYSXXXXXXXXXXERADEATAMMKARYMDTYEVRPNSIIARGHRASSPSINIATADASSTALAEAGMLDDAIQGIVSELVRNQVASGLAQATVCFESRSDLNYVLEWSSGVDDSAELLEFDLDDLETVSEDDIDIMTQHLDISNAAARALRIYDVFRDHVVGPDFSRQLAVAMQPWFIDHVLPSSIITSSSRPSKHGSVPREMLRSRVMTVSACARVIQEAVRARGATSFKLRLDIDCLEGTIGAECRAQAVLTARKAIGTFADARHDDHEMVECPLSATRYIPLSERRQDYFPPCLVTRAALTVQDMFLSTRMDAVKAHKSGSPTIGSALNAASIECLRAYREDVPVQHNSELRASLRLKALYYNDCLMLAHSCRRSHKETGFQEDLDVQKRSLEEAANKVMMIVRRTAEQRLVENLNAACRNGALGAYGTLTRIQRSSALSGAYNAMREVVHVFSEIVPTELAEIAASTLLQKYLVILMKEVVALSEISADGCEQIDGILEDADNNVNTLMDNVKSMETLRGNASPPNIVVQLRSSQQRLSAIREILNARMEDIVRAYRTGKYNAIISRQEVEHFVKAIFEDTPLRSGFIADLDMSLEQESQEWENSN 756          
BLAST of Gcaud9228.t1 vs. uniprot
Match: R7Q667_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q667_CHOCR)

HSP 1 Score: 808 bits (2087), Expect = 4.620e-284
Identity = 426/757 (56.27%), Postives = 559/757 (73.84%), Query Frame = 0
Query:    1 MVATRILDEALRGGEPARLLEQRCLASLRKAEEEVREAVATAPEFISDSKTKHETLLSSAADINTMIEMLGESLDEVTQRTQQMNERSQLYSKKKEVLDLLSVEIIPFVRVAQALEVSDRIAEASFPQLQQAISQLQDTANVALXXXXXXXXXXXXXXXXXXDEATALLKARYMDTFEVRSNSIIARGHTHASSNMNSISVDTSSAALAQAGMLEEAIQGIIRELTRNQVAKSLAQATVFFESSTDHSVNLEWSTGVDDSAELLEFDVDDLETVSEDDIDVMSQHLDISNTAARALRIYDVFRNHVVGPEFSRPLAVAMQPWFAAQILPSSVVVNSLRTTTNDTVPS-DMLRSRIMTACACAKILQEAMRARGATSFTISLDRNILEEATGAECRAQAVLKARTVIGSFSEARHDDNEMVECPLAATEYLPRSERPPDYFPPCLVTRTAKTVHDVFLSTRMDAEKAIRSGSASIGNALNAAALECLQAYRDDVPIQHSSEIRASLRLKALYYNDCLMLAHACRQSLEKFGLSDGLENQKRLLEEAANKVMVIVRRTAEQRLIENLNAACRNGSLGAYGTLTRIQRSSALSGAFNAMREVIHVFSEIVPTELAEIAAATLLQKYLTILMNEVIALPEISADGCEQINSILRDANNNVISLMSSVKSMERLRGNADPPEIVSQLRRSQQKLETVCEILSARMEDIAQSYRAGKYNGLISRIEVEHFLKAIFEDTPLRSGFIADLDISLEQESQEWENSN 756
            MVAT+ILDEALRGGE AR LE+RC A L+ AE    +A++TAP+F++ ++ +H+ L+++A  +NT +EMLGESLD++T+ ++Q+  R++L + KKE L  LS+ I+P+V VA+A+E SD IA   F QL +  S ++     A                   D+ TA++K+R+MDTFE+RS +IIA G +  +   +   V  +SA+LA+ G++++AI+ I+ EL RN VA  +A ATVFF+  TD    LEW+ G D SAELLEFD+DD+E + + +ID MS+HLDISN+ ARAL+IYDV  +HVVG ++SR LA AM+ WFA  +LP SVV+ S R        S   LRSR++   A AK LQ A+RARGA+SFT  ++ + LE   GAECRAQAVL AR  I  FS ARH+DN MVECP+AA +Y+PR+ RPP+YF PCLVTRTA  VHD+FLSTR DA  A++SGS  IGNA+NAAA+EC ++YR+DVP+QH+ ++RASLRLKALYYNDC+M AH+ R S    GL+  L+ +   LEEAA K M IVRRTAEQRL+ENL AACRN +LGAYGTLT+IQRSSALS AFNAMREV+ VFS+IVPTE+AE+AA  LLQKYL  L +EV+ALPEISADGC+QI SIL DA+ NV SLM  VK M  +R  A PP+++ Q+RR+Q++L+ + EIL+ARMEDI  ++R GKY GLI+R EVEHF+++IFEDTPLR+ FI DLD+S+EQE+ EWEN N
Sbjct:    1 MVATKILDEALRGGELARQLEERCTARLKAAEATATKAISTAPDFLNSTRERHKLLMTNAESLNTELEMLGESLDDITESSRQLARRAKLDASKKEALKELSILILPYVEVAKAIEASDDIATRGFEQLHETHSAIEAAIATAAESGLHQLVRTIHDLEERADDVTAVMKSRFMDTFEIRSQTIIATGKSIMAGTSHRNQVGRASASLAKCGLIQDAIKAIVSELMRNHVANRIATATVFFQIETDSGCTLEWTDGHDTSAELLEFDLDDIEPIPDSEIDAMSEHLDISNSVARALKIYDVLTDHVVGVDYSRDLANAMRTWFAEHVLPPSVVLTSKREQHGTADASRSALRSRVIAVSASAKTLQMALRARGASSFTFGVELDELESTVGAECRAQAVLAARRAIALFSNARHNDNNMVECPIAADKYIPRTNRPPEYFAPCLVTRTAIHVHDIFLSTRKDATSALQSGSTGIGNAMNAAAVECFRSYREDVPVQHADDLRASLRLKALYYNDCMMFAHSARISGHHLGLTTDLQVEIACLEEAALKAMTIVRRTAEQRLMENLRAACRNSALGAYGTLTQIQRSSALSAAFNAMREVVSVFSDIVPTEIAEVAAGRLLQKYLISLCSEVVALPEISADGCDQIVSILCDADANVESLMDLVKGMNVVRAGAPPPDVIIQMRRAQKRLQLIREILNARMEDITTAFRVGKYEGLITRDEVEHFIRSIFEDTPLRASFIQDLDVSVEQEAGEWENVN 757          
BLAST of Gcaud9228.t1 vs. uniprot
Match: A0A7S1XH19_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XH19_9RHOD)

HSP 1 Score: 178 bits (451), Expect = 1.830e-43
Identity = 128/423 (30.26%), Postives = 221/423 (52.25%), Query Frame = 0
Query:  345 VPSDMLRSRIMTAC-ACAKILQE--AMRARGATSFTISLDRNILEEATGAECRAQAVLKARTVIGSFSEARHDDNEMVECPLAATEYLPRSERPPDYFPPCLVTRTAKTVHDVFLSTRMDAEKAIRSGSASIGNALNAAALECLQAYRDDVPIQHSSEIRASLRLKALYYNDCLMLAHACRQSLEKFGLSDGLENQKRLLEEAANKVMVIVRRTAEQRLIENLNA-----------ACRNGSLGAYGTLTRIQRS-SALSGAFNAMREVIHVFSEIVPTELAEIAAATLLQKYLTILMNEVIALPEISADGCEQINSILRDANNNVISLMSSVKSMERLRGNADPPEIVSQLRRSQQKLETVCEILSARMEDIAQSYRAGKYNGLISRIEVEHFLKAIFEDTPLRSGFIADLDISLEQESQEW 752
            VP  + R R+  A  AC    QE  +       S  +  D  +LE+  G + RAQ +L+AR  I +F     ++  ++  P A+  + P+S+R P +FP CLVT +A  + +        A + ++ GS ++ NA+ +AA E L A+R+D+P++H+ +   S+RL+ L++NDC+ML            +   +      L +A + V + +R +A + + E +N            A  N +LG  GT+   +R+ SA+S AFN++RE + VF+  +P E  +  + +LL  +L  +   ++ L +IS    E + +++ D  NN  SL   + SM    G+    E ++  + ++++   +  IL  RMEDI   Y+ G+++G+ +R  +E  + AIFEDT LR  FI +LDI  E+E   W
Sbjct:  288 VPWRLTRQRLEAAQNACINFEQEINSRTLEHPISLAVMKDPEVLEKKIGLDIRAQVLLRARHAISNF--VNKNEEHVLVAPTASA-FRPKSDRGPLWFPSCLVTASACDIMNTAKDLLPAAVEVLKGGSTTLANAMVSAAKESLDAFRNDIPLEHADDFGPSIRLRVLFHNDCMMLGFMASN------IGATIRGAPPSLVKAYSGVAIKLRSSAAETISEIINETRLKMEGFLRIATENQALGETGTVIGRRRTQSAISKAFNSLRETVVVFAGFLPAEEGQSYSLSLLGGFLDHISFAIMNLLDISTGASECLIALIGDTLNNCTSLQELILSM----GHEGASEPIASYKVAEKRARALQSILDLRMEDIVTRYKEGEFDGMFTRQNIEVLILAIFEDTDLRKQFIEELDIK-EEEGWNW 696          
The following BLAST results are available for this feature:
BLAST of Gcaud9228.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ITS4_9FLOR0.000e+072.62Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q667_CHOCR4.620e-28456.27Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1XH19_9RHOD1.830e-4330.26Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.357.150coord: 536..744
e-value: 3.9E-18
score: 68.0
NoneNo IPR availablePANTHERPTHR12205CENTROMERE/KINETOCHORE PROTEIN ZW10coord: 439..737

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_56_length_62400_cov_4.320371contigNODE_56_length_62400_cov_4.320371:51212..53576 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9228.t1Gcaud9228.t1Gracilaria caudata M_176_S67 malemRNANODE_56_length_62400_cov_4.320371 51212..53576 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9228.t1 ID=Gcaud9228.t1|Name=Gcaud9228.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=763bp
MVATRILDEALRGGEPARLLEQRCLASLRKAEEEVREAVATAPEFISDSK
TKHETLLSSAADINTMIEMLGESLDEVTQRTQQMNERSQLYSKKKEVLDL
LSVEIIPFVRVAQALEVSDRIAEASFPQLQQAISQLQDTANVALDSSYPQ
LTRMASELHDRADEATALLKARYMDTFEVRSNSIIARGHTHASSNMNSIS
VDTSSAALAQAGMLEEAIQGIIRELTRNQVAKSLAQATVFFESSTDHSVN
LEWSTGVDDSAELLEFDVDDLETVSEDDIDVMSQHLDISNTAARALRIYD
VFRNHVVGPEFSRPLAVAMQPWFAAQILPSSVVVNSLRTTTNDTVPSDML
RSRIMTACACAKILQEAMRARGATSFTISLDRNILEEATGAECRAQAVLK
ARTVIGSFSEARHDDNEMVECPLAATEYLPRSERPPDYFPPCLVTRTAKT
VHDVFLSTRMDAEKAIRSGSASIGNALNAAALECLQAYRDDVPIQHSSEI
RASLRLKALYYNDCLMLAHACRQSLEKFGLSDGLENQKRLLEEAANKVMV
IVRRTAEQRLIENLNAACRNGSLGAYGTLTRIQRSSALSGAFNAMREVIH
VFSEIVPTELAEIAAATLLQKYLTILMNEVIALPEISADGCEQINSILRD
ANNNVISLMSSVKSMERLRGNADPPEIVSQLRRSQQKLETVCEILSARME
DIAQSYRAGKYNGLISRIEVEHFLKAIFEDTPLRSGFIADLDISLEQESQ
EWENSNCRKGRS*
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