Gcaud922.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud922.t1
Unique NameGcaud922.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length458
Homology
BLAST of Gcaud922.t1 vs. uniprot
Match: A0A2V3J5K7_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K7_9FLOR)

HSP 1 Score: 391 bits (1005), Expect = 5.950e-129
Identity = 216/472 (45.76%), Postives = 280/472 (59.32%), Query Frame = 0
Query:   23 IERFATPPDIEANWNLVETSGSA-PSACPSTITHTSWMRLSSSTVTLPHNTILVNRVRCDGQDKQPSFLMYLSTQYNKDLTPIG-DADPLPEPMKQIITTTGPNIAARTAILATGEQFLMGYESHQRFCKGAVFFANGTTAYMLRPFAPLTIPNITTELMPGTKYLLMIPLFKATTCVYSARLRASVEVPMTILPSESPEPTEEPFLDPTPQVLPEP-------ITDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------VCFPASAKVSLRDGSVISISDLQLGDQVLVSNHMYSKVFAFSHREKFVYSTFYSLRTKSGNVISATKGHYVYADHQLQPIETVNIGQMLHTVSGLSPVTSISTERMSGLYNPQTEHGDIVVNGVIASTYTRSLIPSVAHAALTPLRAVSNFCRGDILAALIDSGVKNLPGRSWVR 455
            + R AT  DIEANWNLVE +GS   S CP +ITHT+WM LS S+  L H TILVNR+RCDG   +   + Y S+ Y ++LTP+  +   LP+ M+QIIT  G N    +AI ATGEQFL+GYES  RFCKG  +F NGTTAY+ RPF P TIPN+TT+ +PG+KYLLM+P     TCVYSA L  +V+VP+T  P ++PEP  E  L+P      +P       +  DD                                                                    VCFP SA V+L DGS   +  L++GD+VLV  + YS++FAFSHR+  V   FY+L T SG+ ISAT+GH++YA++   PIE V +GQ L T++G   V  +  + M GLYNPQT  GDI+VNGV+ASTYT+S++P+VAHAAL PLRA+S  CR D+L  L++SGV+ LPGR WVR
Sbjct:   27 LSRLATAADIEANWNLVENAGSTNASICPRSITHTTWMALSPSSYALDHPTILVNRIRCDGAGSRRQLIFYSSSAYFRNLTPMTPETSKLPDRMRQIITAPGTNARIFSAIHATGEQFLIGYESTNRFCKGTTYFENGTTAYLARPFQPFTIPNVTTKFIPGSKYLLMVPFASRATCVYSAALNTTVQVPVTTSP-QTPEPEGEETLEPIDVASAQPAEGETESVEPDDEEDLLSGDGQTGTPSAEVGANPTPDGSATIIDDGSGQADGETTEEEGEPDGSAVETSPASTESEDDDDVCFPESASVTLLDGSSARMWQLEVGDEVLVGPNTYSRIFAFSHRDAHVKKLFYTLYTSSGHAISATQGHFIYANNAAIPIERVQVGQSLRTITGSGVVVKVDRQWMKGLYNPQTVQGDIIVNGVVASTYTKSVVPAVAHAALAPLRAISTVCRVDMLGWLLESGVRQLPGRKWVR 497          
BLAST of Gcaud922.t1 vs. uniprot
Match: A0A2V3IUP4_9FLOR (Hint domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUP4_9FLOR)

HSP 1 Score: 125 bits (314), Expect = 1.690e-31
Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 0
Query:  368 MLHTVSGLSPVTSISTERMSGLYNPQTEHGDIVVNGVIASTYTRSLIPSVAHAALTPLRAVSNFCRGDILAALIDSGVKNLPGRSWVRA 456
            ML+TVS L+ VTS  TERMSGLYN QT+HGDIV+NGVIASTYT+ L+ SVAHAA+TPLRAVS     DILA LIDSG++N+ GRSWVRA
Sbjct:    1 MLYTVSDLNLVTSGITERMSGLYNLQTKHGDIVMNGVIASTYTKLLVLSVAHAAVTPLRAVSEILGVDILATLIDSGLENVRGRSWVRA 89          
BLAST of Gcaud922.t1 vs. uniprot
Match: A0A2V3IR48_9FLOR (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR48_9FLOR)

HSP 1 Score: 133 bits (335), Expect = 4.470e-30
Identity = 71/166 (42.77%), Postives = 104/166 (62.65%), Query Frame = 0
Query:  281 VCFPASAKVSLRDGSVISISDLQLGDQVLVSNHMYSKVFAFSHREKFVYSTFYSLRTKSGNVISATKGHYVYADHQLQPIETVNIGQMLHTVSG-LSPVTSISTERMSGLYNPQTEHGDIVVNGVIASTYTRSLIPSVAHAALTPLRAVSNFCRGD-ILAALIDSG 444
            VCFP SA V L  G V +I D+ +GD+VLVS   YS+V+ F+HR+  V   FY ++  SG VIS T  HY+  D +L+  E+V++G +L   +G    VT I  + M GL+NP T  G IVV+G++AST+T++++PSV  A L P+R +  +   D +L A+   G
Sbjct:  441 VCFPESAHVELECGEVKAIGDISIGDRVLVSGRAYSEVYLFTHRDSNVLYNFYRIKVSSGAVISLTSTHYIPVDGRLKTAESVHVGDVLTLGNGTFDVVTGIDRQHMRGLFNPHTLEGTIVVDGIVASTFTKTVMPSVGEALLAPIRMMFKWRMFDGLLGAMFKEG 606          
BLAST of Gcaud922.t1 vs. uniprot
Match: A0A1X6NXN0_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXN0_PORUM)

HSP 1 Score: 132 bits (332), Expect = 1.340e-29
Identity = 80/176 (45.45%), Postives = 103/176 (58.52%), Query Frame = 0
Query:  281 VCFPASAKVSLRDGSVISISDLQLGDQVLVSNHMYSKVFAFSHREKFVYSTFYSLRTKSGNVISATKGHYVYADHQLQPIETVNIGQMLHTVSGLSPVTSIS-TERMSG--LYNPQTEHGDIVVNGVIASTYTRSLIPSVAHAALTPLRAVSNFCR---------GDILAALIDSG 444
            VCFPA A V L DG  + ++D+ LGD V VS   YS VF F+HR +     F  L T +G  ++AT GHYVYA+ +L     V +G  L TV   +  T ++ T R++G  LYNPQT HGDIVVNG+ ASTYT ++ P+VA   L PLRA+               D LAAL+ SG
Sbjct:  479 VCFPADATVELADGRTVPMADVALGDHVRVSATAYSPVFLFTHRVRGGRRPFVRLTTAAGASLTATAGHYVYANGRLTAAGAVRVGDRLETVGDAATCTVVTATARVAGTGLYNPQTLHGDIVVNGIRASTYTMAIEPAVASTLLAPLRALFRLAGLTTTALDGGADRLAALLPSG 654          
BLAST of Gcaud922.t1 vs. uniprot
Match: A0A2V3IGP9_9FLOR (Warthog protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGP9_9FLOR)

HSP 1 Score: 129 bits (323), Expect = 5.480e-29
Identity = 69/167 (41.32%), Postives = 105/167 (62.87%), Query Frame = 0
Query:  282 CFPASAKVSLRDGSVISISDLQLGDQVLVSNHMYSKVFAFSHREKFVYSTFYSLRTKSGNVISATKGHYVYADHQLQPIETVNIGQMLHTVSGLSPVTSISTERMSGLYNPQTEHGDIVVNGVIASTYTRSLIPSVAHAALTPLRAVSNFCRGDILAALIDSGVKNL 448
            CFPA A V L DGS  ++  ++LGD+V V++  +S VF F+H+   +  +F  L   SG+ +  TKGHY+Y +  L   E+V++G  + T +G+  V++++     GLYNPQT +G+IVVNGV ASTYT ++    AH+ L PLRAV  F    + +A++D+G   L
Sbjct:  306 CFPAHATVELEDGSFKTMDSIELGDRVKVASGEFSPVFMFTHKMAGISYSFVRLTASSGHSLELTKGHYLYVNGDLAAAESVHVGDSIETDAGVVSVSAVARVVSRGLYNPQTVNGNIVVNGVRASTYTTAVEIKTAHSLLLPLRAV--FRLAGMTSAMLDNGSDKL 470          
BLAST of Gcaud922.t1 vs. uniprot
Match: A0A2V3INZ3_9FLOR (Desert hedgehog protein B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INZ3_9FLOR)

HSP 1 Score: 127 bits (319), Expect = 6.800e-28
Identity = 69/154 (44.81%), Postives = 94/154 (61.04%), Query Frame = 0
Query:  282 CFPASAKVSLRDGSVISISDLQLGDQVLVSNH-----MYSKVFAFSHREKFVYSTFYSLRTKSGNVISATKGHYVYADHQLQPIETVNIGQMLHTVSGLSPVT---SISTERMSGLYNPQTEHGDIVVNGVIASTYTRSLIPSVAHAALTPLRA 427
            CFPA+A V+L DGS   +  L +GD VLVS +     +YS +F FSH+++   S+F S+ T  G  +  + GH+VY D +L P   V +G +L +  G   V    S+ST R  GLYNPQT HGD+VVNGV  STYT ++ P  A A + P+RA
Sbjct:  480 CFPAAATVTLEDGSAKRMDALHVGDSVLVSTNEQGGPVYSHIFMFSHQDRSTISSFVSIETSHGQTLQVSPGHFVYIDGRLSPAREVRVGDVLTSHVGREQVIRARSVSTLRARGLYNPQTIHGDLVVNGVQVSTYTTAVKPVAATALMAPIRA 633          
BLAST of Gcaud922.t1 vs. uniprot
Match: A0A2V3IKI5_9FLOR (Tyramine beta-hydroxylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKI5_9FLOR)

HSP 1 Score: 125 bits (315), Expect = 3.090e-27
Identity = 68/149 (45.64%), Postives = 92/149 (61.74%), Query Frame = 0
Query:  281 VCFPASAKVSLRDGSVISISDLQLGDQVLVSNHMYSKVFAFSHREKFVYSTFYSLRTKSGNVISATKGHYVYADHQLQPIETVNIGQMLHTVSGLSP-VTSISTERMSGLYNPQTEHGDIVVNGVIASTYTRSLIPSVAHAALTPLRAV 428
            VCFPASA V LRDGS   + +LQ+GD +LV    YS+VF F+HR   V   F  L T SG  +  T GH++Y + +L    +   G  +   SG +  VT +ST    GL+NPQT HG+IVV+GV++STYT ++ P +AH  L PLR +
Sbjct:  661 VCFPASASVELRDGSRKRMDELQIGDSILVGPGEYSEVFLFTHRTSRVLYRFVQLTTSSGATVKLTSGHFLYLNGKLAMAGSAREGDEVTVGSGETEMVTKVSTVVDKGLFNPQTIHGNIVVDGVVSSTYTHTIAPMMAHGLLAPLRVL 809          
BLAST of Gcaud922.t1 vs. uniprot
Match: A0A2V3IKL0_9FLOR (DBH-like monooxygenase protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKL0_9FLOR)

HSP 1 Score: 125 bits (314), Expect = 4.160e-27
Identity = 68/147 (46.26%), Postives = 91/147 (61.90%), Query Frame = 0
Query:  281 VCFPASAKVSLRDGSVISISDLQLGDQVLVSNHMYSKVFAFSHREKFVYSTFYSLRTKSGNVISATKGHYVYADHQLQPIETVNIGQMLHTVSGLSP-VTSISTERMSGLYNPQTEHGDIVVNGVIASTYTRSLIPSVAHAALTPLR 426
            VCFPASA V LRDGS   + +LQ+GD +LV    YS+VF F+HR   V   F  L T SG  +  T GH++Y + +L    +   G  +   SG +  VT +ST    GL+NPQT HG+IVV+GV++STYT ++ P +AH  L PLR
Sbjct:  665 VCFPASASVELRDGSRKRMDELQIGDSILVGPGEYSEVFLFTHRTSRVLYRFVQLTTSSGATVKLTSGHFLYLNGKLAMAGSAREGDEVTVGSGETEMVTKVSTVVDKGLFNPQTIHGNIVVDGVVSSTYTHTIAPMMAHGLLAPLR 811          
BLAST of Gcaud922.t1 vs. uniprot
Match: A0A2V3J2J0_9FLOR (Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2J0_9FLOR)

HSP 1 Score: 122 bits (305), Expect = 4.400e-27
Identity = 64/153 (41.83%), Postives = 94/153 (61.44%), Query Frame = 0
Query:  281 VCFPASAKVSLRDGSVISISDLQLGDQVLVSNHMYSKVFAFSHREKFVYSTFYSLRTKSGNVISATKGHYVYADHQLQPIETVNIGQMLHTVSGL-SPVTSISTERMSGLYNPQTEHGDIVVNGVIASTYTRSLIPSVAHAALTPLRAVSNFC 432
            VCFPA A+V L DGSV  +  LQ+GD+V V N +YS +F F+H+   +   F  ++T   + ++ T GH++YA+        V +G  +    G  S VT++S    +GLYNPQT HGD++VNGV  +TYT ++  ++AH+ LTPLRA    C
Sbjct:  213 VCFPAHAQVRLEDGSVRRMDQLQIGDRVHVGNGIYSPIFMFTHQHARIRYPFVIIQTDKQHSLTLTSGHFMYANDASVRASAVRVGDYVQLEDGSKSLVTAVSKHISNGLYNPQTLHGDLIVNGVRVTTYTSAIHLTLAHSLLTPLRAFYQTC 365          
BLAST of Gcaud922.t1 vs. uniprot
Match: A0A2V3IFE6_9FLOR (Sonic hedgehog protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE6_9FLOR)

HSP 1 Score: 121 bits (303), Expect = 1.270e-26
Identity = 73/173 (42.20%), Postives = 102/173 (58.96%), Query Frame = 0
Query:  282 CFPASAKVSLRDGSVISISDLQLGDQVLVSNHMYSKVFAFSHREKFVYSTFYSLRTKSGNVISATKGHYVYADHQLQPIETVNIGQMLHTVSG-LSPVTSISTERMSGLYNPQTEHGDIVVNGVIASTYTRSLIPSVAHAALTPLRAV--------SNFCRGDI-LAALIDSG 444
            CFPA   V L DGSV  ++ + +GD+V V   M+S+VF F+HR +   + F  + T S   IS TKGHY++ +  L   +TV +G ++   SG  + V ++   + +GLYNPQT  GDIVVNG+ ASTYT ++ P+ AH  LTP RA+        S F RG + LA L   G
Sbjct:  241 CFPADTTVELEDGSVKEMAQVNIGDRVRVGRSMFSEVFMFTHRLQDGENYFVKIETDSSG-ISLTKGHYLFVNGVLAAAKTVQVGDLVELASGETATVRAVKKVKGTGLYNPQTISGDIVVNGIRASTYTTTVDPAFAHRLLTPFRALYQAFGVATSAFERGAVNLAKLAPQG 412          
The following BLAST results are available for this feature:
BLAST of Gcaud922.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5K7_9FLOR5.950e-12945.76Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A2V3IUP4_9FLOR1.690e-3173.03Hint domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IR48_9FLOR4.470e-3042.77Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A1X6NXN0_PORUM1.340e-2945.45HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A2V3IGP9_9FLOR5.480e-2941.32Warthog protein 6 n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A2V3INZ3_9FLOR6.800e-2844.81Desert hedgehog protein B n=1 Tax=Gracilariopsis c... [more]
A0A2V3IKI5_9FLOR3.090e-2745.64Tyramine beta-hydroxylase n=1 Tax=Gracilariopsis c... [more]
A0A2V3IKL0_9FLOR4.160e-2746.26DBH-like monooxygenase protein 1 n=1 Tax=Gracilari... [more]
A0A2V3J2J0_9FLOR4.400e-2741.83Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386... [more]
A0A2V3IFE6_9FLOR1.270e-2642.20Sonic hedgehog protein n=1 Tax=Gracilariopsis chor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 280..373
e-value: 5.6E-9
score: 45.8
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 282..410
e-value: 7.1E-32
score: 112.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..282
NoneNo IPR availablePANTHERPTHR11889HEDGEHOGcoord: 278..429
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..457
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availableCDDcd00081Hintcoord: 282..407
e-value: 1.25783E-17
score: 77.3093
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 281..430
e-value: 7.8E-29
score: 100.7
IPR006141Intein N-terminal splicing regionPROSITEPS50817INTEIN_N_TERcoord: 282..353
score: 10.15316
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 282..409

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_621_length_20764_cov_4.325691contigNODE_621_length_20764_cov_4.325691:10423..11796 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud922.t1Gcaud922.t1Gracilaria caudata M_176_S67 malemRNANODE_621_length_20764_cov_4.325691 10423..11796 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud922.t1 ID=Gcaud922.t1|Name=Gcaud922.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=458bp
MRVYYLLSASLLLLLAPAVAQPIERFATPPDIEANWNLVETSGSAPSACP
STITHTSWMRLSSSTVTLPHNTILVNRVRCDGQDKQPSFLMYLSTQYNKD
LTPIGDADPLPEPMKQIITTTGPNIAARTAILATGEQFLMGYESHQRFCK
GAVFFANGTTAYMLRPFAPLTIPNITTELMPGTKYLLMIPLFKATTCVYS
ARLRASVEVPMTILPSESPEPTEEPFLDPTPQVLPEPITDDDDDPAQPTS
QETQDVVDDSEDEEGDTEDDDDDDDDDDDDVCFPASAKVSLRDGSVISIS
DLQLGDQVLVSNHMYSKVFAFSHREKFVYSTFYSLRTKSGNVISATKGHY
VYADHQLQPIETVNIGQMLHTVSGLSPVTSISTERMSGLYNPQTEHGDIV
VNGVIASTYTRSLIPSVAHAALTPLRAVSNFCRGDILAALIDSGVKNLPG
RSWVRAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR006141Intein_N
IPR036844Hint_dom_sf