Gcaud9219.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9219.t1
Unique NameGcaud9219.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length307
Homology
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BLAST of Gcaud9219.t1 vs. uniprot
Match: A0A2V3ITT2_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITT2_9FLOR)

HSP 1 Score: 253 bits (647), Expect = 2.470e-80
Identity = 170/300 (56.67%), Postives = 192/300 (64.00%), Query Frame = 0 
Query:    8 MAETPCAQAAPVAPQPSALAPSLPSAGSDAHDDPTPLKSQLTEGPDSELEELPDLSVAQSSSLPLDTPTAQSTPDLASMQPPQPASTPSKTPSFRKVSKAKT--RVKAVPKVDVVQPLAPALSTVSHPLATIPLAPALSAAYPFPALANPNLLPHPFVSLPLQAPRRAVRIAPMGVIPLPPPGAXXLVADFHXXXXXXXXDEPPRIQELSKAKRRGATVTTVVSEQALTPEERTRQKRMLRNRESAARSRDKRRNRNIQLQTSIERYHDKKKAMDEAITELKLLCDTMRHTLEKHNIPVP 305
            MAE+PC Q AP   QPS    S PS+ + A     P +S   EG          +  A    +  DT TA  T       P          P  RK +K+K+  RVK+  K+DV QPLAPAL   SH LATIP      AAYPFPALA P+LLPHP VSLPLQAPRRAVRIAPMGV+PLPPPGA  LVADFH        +E PR+ ELSK+KRR +T + VV EQ  +PEE  RQKRMLRNRESAARSRDKRRNRN+ LQ+SIERY DKKK MD AI ELK LC TMR TLEKHN+ VP
Sbjct:    1 MAESPCVQQAPDT-QPS----SAPSSDAQA-----PRESPPDEGS--------PVKTASDPQITFDTTTASPTQTTDPTLP--------HVPFCRKPAKSKSSIRVKSATKIDVAQPLAPALGASSHALATIPXXXXXXAAYPFPALAAPHLLPHPLVSLPLQAPRRAVRIAPMGVMPLPPPGAAALVADFHAAVVA---EENPRLNELSKSKRRTSTASAVVPEQTFSPEEMARQKRMLRNRESAARSRDKRRNRNMHLQSSIERYRDKKKEMDSAILELKALCQTMRSTLEKHNVSVP 271
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BLAST of Gcaud9219.t1 vs. uniprot
Match: R7QF01_CHOCR (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF01_CHOCR)

HSP 1 Score: 92.8 bits (229), Expect = 7.540e-18
Identity = 78/205 (38.05%), Postives = 108/205 (52.68%), Query Frame = 0 
Query:  126 ALSTVSHPLATIPLAPALSAAY-----PFPALANPNLLPHPFVSLPLQAPRRAVRIAPMGVIPLPPPG--AXXLVADFHXXXXXXXXDEPPR----------------------IQELSKAKRRGATVTTVVSEQALTPEERTRQKRMLRNRESAARSRDKRRNRNIQLQTSIERYHDKKKAMDEAITELKLLCDTMRHTLEKHN 301
            A++T + P   IP + ++SAA      P  A   P + P   VS+P+   RRAVRIAPMGV+PLPP    A  +V D            PP                       I ++ K KRRG    +  + + +TPEERT+QKRMLRNRESAARSRDKR+ +NIQL+TSI ++  K   +++ + EL+ +   M+  L   N
Sbjct:  149 AIATSTVPGIQIPSSLSVSAAQFTAFAPLAANGAPIMSPS-MVSVPMTVGRRAVRIAPMGVLPLPPQSTVATSMVPDLTNSTSAGLV--PPASGSEGATIESHLNASTGGAGAIIGDMPKGKRRGTPGGSSTNPEGMTPEERTKQKRMLRNRESAARSRDKRKTKNIQLETSIAKHTKKNLMLEKVLRELQDVIRCMQQELSNQN 350
The following BLAST results are available for this feature:
BLAST of Gcaud9219.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITT2_9FLOR2.470e-8056.67BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QF01_CHOCR7.540e-1838.05BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 234..299
e-value: 2.7E-7
score: 40.2
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 237..296
e-value: 3.7E-7
score: 30.1
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 242..257
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 237..300
score: 9.472958
NoneNo IPR availableGENE3D1.20.5.170coord: 235..304
e-value: 3.5E-6
score: 29.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..262
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..306
NoneNo IPR availableCDDcd14686bZIPcoord: 240..287
e-value: 4.4124E-9
score: 49.8513
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 240..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_56_length_62400_cov_4.320371contigNODE_56_length_62400_cov_4.320371:12621..13541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9219.t1Gcaud9219.t1Gracilaria caudata M_176_S67 malemRNANODE_56_length_62400_cov_4.320371 12621..13541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9219.t1 ID=Gcaud9219.t1|Name=Gcaud9219.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=307bp
MPSAAAAMAETPCAQAAPVAPQPSALAPSLPSAGSDAHDDPTPLKSQLTE
GPDSELEELPDLSVAQSSSLPLDTPTAQSTPDLASMQPPQPASTPSKTPS
FRKVSKAKTRVKAVPKVDVVQPLAPALSTVSHPLATIPLAPALSAAYPFP
ALANPNLLPHPFVSLPLQAPRRAVRIAPMGVIPLPPPGAAALVADFHAAA
AAVVPDEPPRIQELSKAKRRGATVTTVVSEQALTPEERTRQKRMLRNRES
AARSRDKRRNRNIQLQTSIERYHDKKKAMDEAITELKLLCDTMRHTLEKH
NIPVPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP