Gcaud921.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud921.t1
Unique NameGcaud921.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length649
Homology
BLAST of Gcaud921.t1 vs. uniprot
Match: A0A2V3J5J9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5J9_9FLOR)

HSP 1 Score: 911 bits (2354), Expect = 0.000e+0
Identity = 462/663 (69.68%), Postives = 541/663 (81.60%), Query Frame = 0
Query:    1 MGLSPSSILQFLFHLRSWRRNNGNNNDNTLPLPHVIPYPDRVQSTPQSCSSATP---FRNSCD-EASTQALSSTPRSSSSSR----------RGKQMSASDADKSKVEATGKLRDLEAQLPNRSHRFKYNPEGLGQRLLVSTRLKNKLETSRIVRIPYAKSYKYTLIISLLLTGAFLTPQMLPKWIGFEWASPEDLCQSPDAKLVEIQQQLINLTSLRESKHFLKQQEYTLDCMNRSAADFYHGANGKPPRFLWPHECDSEKARMSLNETTCVEQKTNVCKRVNFFARIFASISGDCVQKVGPDLCVESTNAERSESLYQLEKERNALDQNISQVDTEPIISTAEAKISEVISRLMTQIDLAADCFIVYSVFAVMVGIPLVISKREKTSRVMSATLGLTKLTFVMVFVILLSLYDSFLLIFQDTDFPRLFQNFLNDPCYVNPTFSSKRVGMIVDMCNNISYIDTQSDYVLQRMDTVYYDTRLFGHCKDDDRKLAIHPKLKAMDKIRKLYRNGNISNPGVCNATELDEKTSIAPANARASKWKALLGSGVVAQLALKIVFTSWIIHLLAFMEPMVLHNGKVELWGMKPKMLLTVEDETSIRRFARDKHLLPLIVFSVLLVVEVVLFGYSIYTTINGVGHIATQN-ATIPLTKAPEWRCPSSLGM 648
            MG +P      +     WRR     N   L LP  IP+PDR+     S ++++P   F N  D       +   P S + S+          RG + S  D  K  VE     RD+EAQ P +SHRFKY+P G GQRLLVSTRLKNKLE+S+I+R+PYA+S+KYTL+++LL TGAFLTPQ+LPKWIGFEWASPEDLCQSPD KL EI +Q++N+T +R++KHF++QQEYTLDCMNRSAADFYHG NGKPPRFLWP ECDSEKARM+LNETTCVEQKTN+CKRVNFFAR+F S+SG+CVQK GPDLCVESTNAERSESLYQLEKERNA +QN + + TEPI++TAE+KIS++I+RLM Q+DLAADCFIVYSV +V+VGIPLVISKREKTSRV+ ATLGLTK+TFVMVF+ILLSLYDS  LIF+DTDFPR+FQNFLNDPCYVNP FS++RVGMIVD+CNNISYID QSDY+LQRMD VYYDTRLFGHCKDDDR+LA+HPKLKAMDKIRK+YR GNISNPG+CNATELD +TS+AP N R SKWKAL+GSGVVAQL LKIVFT WIIH L+F+EPMVLH+GKVELWG+K +  L+ EDE +IRRFARDKHLLPLI FS LL +E+ LFGYSIYTTI+G G I T N  T+PLTK PE RCPS LG+
Sbjct:    1 MGATPPENSPKISRFLPWRRVP---NRRILSLPEAIPFPDRIAPNVGSSNASSPSVRFSNQSDGPRGRHRMEEAPFSDAISQPFRRLPLLQNRGSE-SNFDHQKGIVEEPDNERDVEAQHPPQSHRFKYDPPGWGQRLLVSTRLKNKLESSKIIRVPYARSHKYTLVLTLLFTGAFLTPQLLPKWIGFEWASPEDLCQSPDDKLNEIHRQVLNMTLIRDAKHFIEQQEYTLDCMNRSAADFYHGKNGKPPRFLWPKECDSEKARMALNETTCVEQKTNICKRVNFFARLFVSVSGNCVQKTGPDLCVESTNAERSESLYQLEKERNAFEQNFTDIKTEPIVATAESKISQIINRLMLQVDLAADCFIVYSVVSVLVGIPLVISKREKTSRVVGATLGLTKMTFVMVFIILLSLYDSAFLIFRDTDFPRMFQNFLNDPCYVNPDFSARRVGMIVDVCNNISYIDQQSDYILQRMDRVYYDTRLFGHCKDDDRELAVHPKLKAMDKIRKMYREGNISNPGICNATELDTRTSVAPENERTSKWKALMGSGVVAQLLLKIVFTGWIIHFLSFIEPMVLHSGKVELWGVKSRTSLSEEDEKAIRRFARDKHLLPLIFFSTLLAIEIALFGYSIYTTISGAGEIQTHNNKTMPLTKPPELRCPSVLGL 659          
BLAST of Gcaud921.t1 vs. uniprot
Match: R7QPE7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPE7_CHOCR)

HSP 1 Score: 381 bits (979), Expect = 3.140e-123
Identity = 202/439 (46.01%), Postives = 283/439 (64.46%), Query Frame = 0
Query:  220 MNRSAADFYHGANGKPPRFLWPHECDSEKARMSLNETTCVEQKT-NVCKRVNFFARIFASISGDCVQKVGPDLCVESTNAERSESLYQLEKERNALDQNISQVDTEPIISTAEAKISEVISRLMTQIDLAADCFIVYSVFAVMVGIPLVISKREKTSRVMSATLGLTKLTFVMVFVILLSLYDSFLLIFQDTDFPRLFQNFLNDPCYVNPTFSSKRVGMIVDMCNNISYIDTQSDYVLQRMDTVYYDTRLFGHCKDDDRKLAIHPKLKAMDKIRKLYRNGNISNPGVCNATELDEKTSIAPANARASKWKALLGSGVVAQLALKIVFTSWIIHLLAFMEPMVLHNGKVELWGMKPK--------------MLLTVEDETSIRRFARDKHLLPLIVFSVLLVVEVVLFGYSIYTTINGVGHIATQNATIPLTKAPEWRCP 643
            MN SA  FY      P RF WPHEC  EKA  SL +  CV   T +VC  +    +IFAS++  C     P  CV++ ++ER+E L +LE+E NA   N +  +T+PI+ TA  K++E+++R++ Q+D+A+D +I YS+ A+++G+PL+I KREK SR++ AT G+TKLTF++V V+ LS+Y+SF LI ++TDF R+F+NF NDPCYV+  FS +RV +I+  CNN++ + T S Y LQ MD VY+ TR F  CKD  R+ + HP+   MD +R  YR+G+   PG CNAT LD +TS AP +   SK +ALLGSGVVAQL LK + TSW++H++A+ EPM++HNGKVE+W    K              M L   +  S  RFARDKHLLP I  S+L+V EVVL  YS+  T +G   + T      ++ A  + CP
Sbjct:    1 MNSSADTFYQA----PDRFQWPHECTPEKASDSLEDEVCVGPTTKSVCDDIGGIRKIFASLAQTCKSITVPKKCVQTVDSERTEELLRLEREENAQVFNKTATETQPIVQTANDKVTEILNRILVQVDIASDIYIAYSIVALIIGMPLIIYKREKGSRILGATFGMTKLTFIIVVVVFLSMYESFFLIMKETDFVRIFRNFRNDPCYVDGDFSRRRVNLIIHTCNNVTQLATNSTYTLQDMDGVYFTTRRFALCKDATREPSAHPRQGDMDSLRHSYRDGDKKFPGSCNATYLDSETSTAPEDPGFSKLQALLGSGVVAQLFLKFIVTSWLVHIMAYCEPMIMHNGKVEIWDTNRKPTEEKGGEEKDAQEMPLNEREAASATRFARDKHLLPAIFMSILMVGEVVLIAYSMVVTHSGRSDMLTTAGNTGMSTA--FTCP 433          
BLAST of Gcaud921.t1 vs. uniprot
Match: A0A7S3LRQ6_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRQ6_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 4.170e-10
Identity = 59/254 (23.23%), Postives = 118/254 (46.46%), Query Frame = 0
Query:  338 ISRLMTQIDLAADCFIVYSVFAVMVGIPLVISKREKTSRVMSATLGLTKLTFVMVFVILLSLYDSFLLIFQDTDFPRLFQNFLNDPCYVNPTFSSKRVGMIVDMCNNISYIDTQSDYVLQRMDTVYYDTRLFGHCKDDDRKLAIHPKLKAMDKIRKLYRNGNISNPGVCNA---TELDEKTSIAPANARASKWKALLGSGVVAQLALKIVFTSWIIHLLAFMEPMVLHNGKVELWGMKPKMLLTVEDETSIRRF 588
            + RLM QI+LA+D +I+YSVFA+ V  P ++ +    +R+      +++  F+++FV+ L  Y          +  + F N   D CY++  F       + + C  +  ++  S++ L  +D   ++  +  + + +       P+L    K +       +    +CN    + L +  ++AP     + +  LL  GV+AQL  K +  ++   +   ++P+ +HNGKVE  G +  +    E E  +R +
Sbjct:  321 LERLMWQINLASDLYIIYSVFALFVISPFIVYQSSFKTRLKRQYFSISQGLFILLFVLFLWTYPYIQATINLENLLKYFHNINVDTCYIDGKFLRGVKNTVQEACFKLEQLN--SNFTLASLDLQDFNASIDLYDQCNSAYQDEFPELYDKTKEKASEAQETVLLAELCNQNIISNLVDANTVAPGVTETNVFGILLKLGVLAQLFAKFILVAFAKSVYQIVDPLAVHNGKVETIGKETPVPPASEVERFLRTY 572          
The following BLAST results are available for this feature:
BLAST of Gcaud921.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J5J9_9FLOR0.000e+069.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPE7_CHOCR3.140e-12346.01Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3LRQ6_9STRA4.170e-1023.23Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 304..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 369..388
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..346
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 594..616
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 535..555
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 347..368
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 556..593
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 617..648
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 408..534
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 389..407
NoneNo IPR availableTMHMMTMhelixcoord: 382..404
NoneNo IPR availableTMHMMTMhelixcoord: 347..369
NoneNo IPR availableTMHMMTMhelixcoord: 534..556
NoneNo IPR availableTMHMMTMhelixcoord: 594..616

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_621_length_20764_cov_4.325691contigNODE_621_length_20764_cov_4.325691:5680..7626 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud921.t1Gcaud921.t1Gracilaria caudata M_176_S67 malemRNANODE_621_length_20764_cov_4.325691 5680..7626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud921.t1 ID=Gcaud921.t1|Name=Gcaud921.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=649bp
MGLSPSSILQFLFHLRSWRRNNGNNNDNTLPLPHVIPYPDRVQSTPQSCS
SATPFRNSCDEASTQALSSTPRSSSSSRRGKQMSASDADKSKVEATGKLR
DLEAQLPNRSHRFKYNPEGLGQRLLVSTRLKNKLETSRIVRIPYAKSYKY
TLIISLLLTGAFLTPQMLPKWIGFEWASPEDLCQSPDAKLVEIQQQLINL
TSLRESKHFLKQQEYTLDCMNRSAADFYHGANGKPPRFLWPHECDSEKAR
MSLNETTCVEQKTNVCKRVNFFARIFASISGDCVQKVGPDLCVESTNAER
SESLYQLEKERNALDQNISQVDTEPIISTAEAKISEVISRLMTQIDLAAD
CFIVYSVFAVMVGIPLVISKREKTSRVMSATLGLTKLTFVMVFVILLSLY
DSFLLIFQDTDFPRLFQNFLNDPCYVNPTFSSKRVGMIVDMCNNISYIDT
QSDYVLQRMDTVYYDTRLFGHCKDDDRKLAIHPKLKAMDKIRKLYRNGNI
SNPGVCNATELDEKTSIAPANARASKWKALLGSGVVAQLALKIVFTSWII
HLLAFMEPMVLHNGKVELWGMKPKMLLTVEDETSIRRFARDKHLLPLIVF
SVLLVVEVVLFGYSIYTTINGVGHIATQNATIPLTKAPEWRCPSSLGM*
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