Gcaud9207.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9207.t1
Unique NameGcaud9207.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length212
Homology
BLAST of Gcaud9207.t1 vs. uniprot
Match: A0A2V3J467_9FLOR (SAM domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J467_9FLOR)

HSP 1 Score: 279 bits (713), Expect = 1.490e-92
Identity = 139/195 (71.28%), Postives = 168/195 (86.15%), Query Frame = 0
Query:   14 SSAESSAPKVRSVADVQKWLYDLGFSQYTHVFLTNQVDGVILKTLTSEELRDDLGVTNLRHRREIRDAICQLVKEEAPPAAQHLPEHGRILDHLSNVRTYHSWLRVGIQFLGFAVVTLRLSPTFRNTQLITASSIYFAVIGIAALVYGVYRYKTVIDMIETSGPSTKNYSPDRVGVMSLLVLAFAAFVLALTILA 208
            +S  + A KVR+VADV+KWL DLG+SQY   F +N+V+G ILKTLTSEELRDDL VTNLRHRR I DA  +L++E+APP AQ+LPEHGRILDHLSNVRTYHSW+RVGIQFL FAVVTLRL+P FR+T L+TA+S YFA++GI+AL+Y V+RYK VIDMIE+SGPST NY+PDRVGV+S+L +A AAF LAL I+A
Sbjct:   28 ASENAPAAKVRTVADVRKWLCDLGYSQYADSFSSNEVNGSILKTLTSEELRDDLAVTNLRHRRHILDATRRLLQEDAPPTAQYLPEHGRILDHLSNVRTYHSWIRVGIQFLAFAVVTLRLAPNFRSTALVTAASFYFALVGISALLYAVFRYKRVIDMIESSGPSTHNYTPDRVGVVSMLFIALAAFTLALIIIA 222          
BLAST of Gcaud9207.t1 vs. uniprot
Match: A0A1X6P5I1_PORUM (SAM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5I1_PORUM)

HSP 1 Score: 218 bits (555), Expect = 2.250e-67
Identity = 111/193 (57.51%), Postives = 141/193 (73.06%), Query Frame = 0
Query:   22 KVRSVADVQKWLYDLGFSQYTHVFLTNQVDGVILKTLTSEELRDDLGVTNLRHRREIRDAICQLVKEEA--------PPAAQHLPEHGRILDHLSNVRTYHSWLRVGIQFLGFAVVTLRLSPTFRNTQLITASSIYFAVIGIAALVYGVYRYKTVIDMIETSGPSTKNYSPDRVGVMSLL--VLAFAAFVLAL 204
            KV S ADVQ WL  LG+++Y   F  N++ G +L+TLTS+ELRDDLGV +LRHRR++ DAI  L+  +A        P     LPEHGRILDHLSNVR+YHSW+RVG+Q LGF++VTLRL+P FR   L+TA+S+YFA IG+ AL+YGV+RY+ VI MIE SG  T  Y PDRVGV+++L  VL  A FVL +
Sbjct:  115 KVHSSADVQSWLSALGYARYGPTFAANEITGDVLRTLTSDELRDDLGVRHLRHRRDLLDAISALLARDAELRSSPTVPDVVDALPEHGRILDHLSNVRSYHSWMRVGVQMLGFSIVTLRLTPKFRERPLVTAASLYFAAIGVGALLYGVFRYRQVIGMIERSGAKTPAYDPDRVGVLAMLFAVLTAAVFVLVI 307          
BLAST of Gcaud9207.t1 vs. uniprot
Match: A0A7S2ZTG3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZTG3_9RHOD)

HSP 1 Score: 182 bits (463), Expect = 1.150e-54
Identity = 97/193 (50.26%), Postives = 130/193 (67.36%), Query Frame = 0
Query:   13 SSSAESSAPKVRSVADVQKWLYDLGFSQYTHVFLTNQVDGVILKTLTSEELRDDLGVTNLRHRREIRDAICQLVKEEAPPAAQHLPEHGRILDHLSNVRTYHSWLRVGIQFLGFAVVTLRLSPTFR-NTQLITASSIYFAVIGIAALVYGVYRYKTVIDMIETSGPSTKNYSPDRVGVMSLLVLAFAAFVLAL 204
            SSS   +   +++  DV  WL +LG  +Y   F++N+++G IL +LTSEELRDDLGV NL+HRRE+  AI  +   +       LPEHGRILDHLSNVRT+HSW+RVG+Q L FA+V+LRL PT+R N  LIT  S+Y++ +G  A++YG+ RY  V+  IE SG  T  Y PD++GV  +LVL   A  L L
Sbjct:   20 SSSVAEAWQGLQTSEDVANWLRELGKDEYISTFMSNEINGEILASLTSEELRDDLGVINLKHRRELLTAIKSIGGMKK--GEDTLPEHGRILDHLSNVRTFHSWVRVGVQLLAFALVSLRLFPTWRENRNLITGCSLYYSCVGAFAILYGLARYALVVKWIEESGVKTPKYHPDKIGVAVMLVLVLVATALTL 210          
BLAST of Gcaud9207.t1 vs. uniprot
Match: A0A5J4YSG0_PORPP (SAM domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSG0_PORPP)

HSP 1 Score: 172 bits (436), Expect = 4.840e-50
Identity = 95/193 (49.22%), Postives = 124/193 (64.25%), Query Frame = 0
Query:   15 SAESSAPKVRSVADVQKWLYDLGFSQYTHVFLTNQVDGVILKTLTSEELRDDLGVTNLRHRREIRDAICQLVKEEAPPAAQHLP-EHGRILDHLSNVRTYHSWLRVGIQFLGFAVVTLRLSPTFRNTQLITASSIYFAVIGIAALVYGVYRYKTVIDMIETSGPSTKNYSPDRVGVMSLLVLAFAAFVLALTI 206
            + +  AP+  SV DV  WL   G+ +Y   F  N+VDG IL TL++EELRD+L V NL+HRR++  AI  LV +    A +  P E G IL+HLSNVRTYHSWLR+GIQ    AV TLRL+P FR   + TAS+ Y  + G+   +YG+YRY+ VI MI+ S    + Y PD VGV  +LVL+ AA  L LT+
Sbjct:   69 AGQKGAPQ--SVEDVADWLKRQGYPEYVDAFRFNEVDGAILTTLSTEELRDELHVCNLKHRRDLLAAIDLLVDQSGMVAPRETPPEDGWILNHLSNVRTYHSWLRLGIQLFSLAVATLRLTPVFRPKGITTASAFYNCLCGVGLFLYGIYRYRQVILMIDNSSQHDRFYKPDYVGVYGMLVLSLAAGALVLTL 259          
BLAST of Gcaud9207.t1 vs. uniprot
Match: A0A7S1XIP6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XIP6_9RHOD)

HSP 1 Score: 161 bits (408), Expect = 4.530e-47
Identity = 76/134 (56.72%), Postives = 102/134 (76.12%), Query Frame = 0
Query:   23 VRSVADVQKWLYDLGFSQYTHVFLTNQVDGVILKTLTSEELRDDLGVTNLRHRREIRDAICQLVKEEAPPAAQHLPEHGRILDHLSNVRTYHSWLRVGIQFLGFAVVTLRLSPTFRNTQLITASSIYFAVIGIA 156
            + +  DV +WL  LG+ +Y   F TN+V+G ILKTL+SEELRDDLGV+ LRHRR+I DAI +LV+E  P     LPEHGR+LDHLSNVRTYHSW+R+GIQ L  ++ TLRL+P +R+  L+TAS++ F  +G++
Sbjct:   35 ITNADDVAEWLRALGYPEYVEAFRTNEVNGEILKTLSSEELRDDLGVSVLRHRRDILDAINELVRESVPVQRDALPEHGRVLDHLSNVRTYHSWVRIGIQILALSIGTLRLAPVYRDKTLVTASAMTFGFMGVS 168          
BLAST of Gcaud9207.t1 vs. uniprot
Match: A0A1X6PDD2_PORUM (SAM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PDD2_PORUM)

HSP 1 Score: 111 bits (277), Expect = 1.350e-26
Identity = 73/195 (37.44%), Postives = 107/195 (54.87%), Query Frame = 0
Query:   21 PKVRSVADVQKWLYDLGFSQYTHVFLTNQVDGVILKTLTSEELRDDLGVTNLRHRREIRDAICQLVKEEA---PPAA------QHLPEHGRILDHLSNVRTYHSWLRVGIQFLGFAVVTLRLSPTFRNTQ------LITASSIYFAVIGIAALVYGVYRYKTVIDMIETSGPSTKNYSPDRVGVM-SLLVLAFAA 199
            P + + ++V  W+ DLGF +Y   FL + V GVIL++LT+E+LRD+LGV  LRHRR +  AI  L  EE    P A         LPE GR+L H+SNVRT HSW R+ +Q L  A   +RL+      +       + A+   F    +   VYG +R+  V  ++++   ++  + PD  GV+ S L+L F A
Sbjct:   23 PALDTPSEVVAWVSDLGFPEYAPAFLDHAVSGVILRSLTTEDLRDELGVKPLRHRRALIAAIDHLNSEETAGTPHAGLVTGTFSALPEFGRMLTHMSNVRTVHSWQRLAVQQLILAAGVVRLALVELKEEKDVLYRFVLAACSAFCGACVLFAVYGGWRFLKVTSILDSDKRASSKFYPDLAGVIFSQLILHFVA 217          
BLAST of Gcaud9207.t1 vs. uniprot
Match: A0A7S3EMN2_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EMN2_9RHOD)

HSP 1 Score: 105 bits (262), Expect = 8.120e-24
Identity = 61/164 (37.20%), Postives = 87/164 (53.05%), Query Frame = 0
Query:   23 VRSVADVQKWLYDLGFSQYTHVFLTNQVDGVILKTLTSEELRDDLGVTNLRHRREIRDAICQLVKEEAPPAAQHLPEHGRILDHLSNVRTYHSWLRVGIQFLGFAVVTLRLSPTFRNTQLITASSIYFAVIGIAALVYGVYRYKTVIDMIETSGPSTKNYSPDR 186
            V  V DV  W+  +G+ +Y + F+ N+VDG  LKT+T +ELR+++GVT  +HR +I   +  L+   +      +PE GR+L  LSNVRTY SW  VGIQ   F+V  +RL P  R   L+   S++ AV  I        R  +    +    PS  N  P R
Sbjct:   73 VIGVDDVVDWINAIGYPEYANKFVENEVDGRTLKTITQQELREEIGVTIPKHRSDILRRLDGLIMSTSRAQLDPIPEIGRVLSLLSNVRTYQSWTLVGIQLFIFSVGYMRLGPLIRPVWLVATGSLFAAVSAIGVFTVRSGRNNSSAYPLGRKQPSP-NSGPSR 235          
BLAST of Gcaud9207.t1 vs. uniprot
Match: A0A7S3ECN3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ECN3_9RHOD)

HSP 1 Score: 91.3 bits (225), Expect = 4.610e-19
Identity = 62/175 (35.43%), Postives = 94/175 (53.71%), Query Frame = 0
Query:   29 VQKWLYDLGFSQYTHVFLTNQVDGVILKTLTSEELRDDLGVTNLRHRREIRDAICQLVKEEAPPAAQHLPEHGRILDHLSNVRTYHSWLRVGIQFLGFAVVTLRLSPTFRNTQLITASSIYFAVIGIAALVYGVYRYKTVIDMIETSGPSTKNYS---PDRVGVMSLLVLAFAAF 200
            V +WL  +G   Y+  F+   VD  +LK+L+ ++LRD+LGVTN+  RR I + I  L+  +    A  LPE GRIL HL NVR +++W+R  +Q L FAV  +       +   I   +I   ++ I  L+ G +RY  VI  +        NY+   P  +G++ +LV A A F
Sbjct:   38 VVEWLERIGMGSYSAPFIEQTVDVSLLKSLSLKDLRDELGVTNMSDRRRIFNGILMLLSRDVDKYA--LPEDGRILTHLFNVRVFNAWIRCAVQLLIFAVA-VNFLVFCDDVTFIRNCAIGACIVAIVFLLVGFWRY-FVIHRVS----KRVNYNMLVPSDIGLIPVLVSAAATF 204          
BLAST of Gcaud9207.t1 vs. uniprot
Match: A0A2V3IUE9_9FLOR (DUF202 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUE9_9FLOR)

HSP 1 Score: 77.4 bits (189), Expect = 5.570e-14
Identity = 62/208 (29.81%), Postives = 101/208 (48.56%), Query Frame = 0
Query:    3 PPPALPLRHASSSAESSAPKVRSVAD---VQKWLYDLGFSQYTHVFLTNQVDGVILKTLTSEELRDDLGVTNLRHRREIRDAICQLVKEEAPPAAQHLPEHGRILDHLSNVRTYHSWLRVGIQFLGFAVVTLRLSPTFRNTQLITASSIYFAVIGIAALVYGVYRYKTVIDMIETSGPSTKNYSPDRVGVMSLLVLAFAAFVLALTIL 207
            P P  P      S+  S+P+  +V D   VQK L+  G + Y  +F  + +   +L++L++ ELRD++ +  L HRR+       ++    P  +  +P  G IL HLSNVRT HSW+R   Q +  ++   RL    R+ ++    +I    +G    VYG +RY  V+  +E        +S D VG +  L ++     L L +L
Sbjct:    4 PMPVRPALTRHRSSRHSSPQQDAVLDAPFVQK-LHQNGLAAYVPLFEAHNLSEHVLQSLSNAELRDEVRMNVLAHRRK-------MLSLTQPARSCGVPVFGAILVHLSNVRTCHSWIRTTFQAVILSLAVSRLGAL-RDERIALGVAIGICCMGAVHSVYGGWRYLAVMKRVENG----MRFSADTVGAVLALCVSLCVAALVLLVL 198          
BLAST of Gcaud9207.t1 vs. uniprot
Match: A0A7S3A7Q0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A7Q0_9RHOD)

HSP 1 Score: 68.6 bits (166), Expect = 2.390e-11
Identity = 39/108 (36.11%), Postives = 56/108 (51.85%), Query Frame = 0
Query:   97 LPEHGRILDHLSNVRTYHSWLRVGIQFLGFAVVTLRLSPTFRNTQLITASSIYFAVIGIAALVYGVYRYKTVIDMIETSGPSTKNYSPDRVGVMSLLVLAFAAFVLAL 204
            +PE GR L  LSNVRTY SW  VGIQ   F+V  +RL P  R   L+   S++ AV  I    Y    Y+  + ++  S P+ +  +P    V+ L V+    F+L +
Sbjct:   11 IPEIGRGLSLLSNVRTYQSWTLVGIQLFIFSVGYMRLGPLIRPVWLVATGSLFAAVSAIGVFTYAGVSYRRFLAVLRNSSPNRRVLTPAYRAVVVLAVIELVIFLLTI 118          
The following BLAST results are available for this feature:
BLAST of Gcaud9207.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A2V3J467_9FLOR1.490e-9271.28SAM domain-containing protein n=1 Tax=Gracilariops... [more]
A0A1X6P5I1_PORUM2.250e-6757.51SAM domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A7S2ZTG3_9RHOD1.150e-5450.26Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YSG0_PORPP4.840e-5049.22SAM domain-containing protein n=1 Tax=Porphyridium... [more]
A0A7S1XIP6_9RHOD4.530e-4756.72Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A1X6PDD2_PORUM1.350e-2637.44SAM domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A7S3EMN2_9RHOD8.120e-2437.20Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
A0A7S3ECN3_9RHOD4.610e-1935.43Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A2V3IUE9_9FLOR5.570e-1429.81DUF202 domain-containing protein n=1 Tax=Gracilari... [more]
A0A7S3A7Q0_9RHOD2.390e-1136.11Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 21..88
e-value: 2.0E-10
score: 50.6
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 25..84
e-value: 3.2E-13
score: 49.9
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 24..88
score: 16.218748
IPR003807Domain of unknown function DUF202PFAMPF02656DUF202coord: 105..168
e-value: 3.1E-11
score: 43.5
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 10..89
e-value: 8.3E-17
score: 63.4
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 24..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 187..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..163
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 210..211
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 187..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_551_length_22383_cov_4.305805contigNODE_551_length_22383_cov_4.305805:6941..7576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9207.t1Gcaud9207.t1Gracilaria caudata M_176_S67 malemRNANODE_551_length_22383_cov_4.305805 6941..7576 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9207.t1 ID=Gcaud9207.t1|Name=Gcaud9207.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=212bp
MAPPPALPLRHASSSAESSAPKVRSVADVQKWLYDLGFSQYTHVFLTNQV
DGVILKTLTSEELRDDLGVTNLRHRREIRDAICQLVKEEAPPAAQHLPEH
GRILDHLSNVRTYHSWLRVGIQFLGFAVVTLRLSPTFRNTQLITASSIYF
AVIGIAALVYGVYRYKTVIDMIETSGPSTKNYSPDRVGVMSLLVLAFAAF
VLALTILAIPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR003807DUF202
IPR013761SAM/pointed_sf