Gcaud9204.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9204.t1
Unique NameGcaud9204.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length225
Homology
BLAST of Gcaud9204.t1 vs. uniprot
Match: A0A2V3J6V0_9FLOR (Membrane-anchored ubiquitin-fold protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6V0_9FLOR)

HSP 1 Score: 231 bits (589), Expect = 1.230e-74
Identity = 114/146 (78.08%), Postives = 130/146 (89.04%), Query Frame = 0
Query:    1 MDVDKTALSQTDTALTDLDSSPAVNHSMCDIRFLMVNGTSFRLSVPASSTILNVKNAVIQQRPKELADFLKDTSPGVNS-PTKIDDIRVLHLGKFLDDIKTLKECNFSTTNHEFTTVHLSVRVPTSPSDEVKDKFNKKGSACCQII 145
            MD +K ALSQ DTALTD+DSSPAV +S CDIRFLMVNGTSFRL+VPASSTI +VK+AVIQ RPKELADFLKDT+P   + PTK+DDIRVLHLGKFLDD+KTLKECNF+T  +EFTTVHLSVRVP++PSDEVKDKFNKK   CCQ++
Sbjct:    1 MDTEKPALSQADTALTDVDSSPAVQNSSCDIRFLMVNGTSFRLTVPASSTIHDVKDAVIQHRPKELADFLKDTNPNAAATPTKVDDIRVLHLGKFLDDVKTLKECNFNTATNEFTTVHLSVRVPSNPSDEVKDKFNKKKPPCCQVM 146          
BLAST of Gcaud9204.t1 vs. uniprot
Match: A0A7S0BLQ6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BLQ6_9RHOD)

HSP 1 Score: 112 bits (279), Expect = 7.480e-28
Identity = 60/135 (44.44%), Postives = 87/135 (64.44%), Query Frame = 0
Query:   12 DTALTDLDS-SPAVNHSMCDIRFLMVNGTSFRLSVPASSTILNVKNAVIQQRPKELADFLKDT-SPGVNSPTKIDDIRVLHLGKFLDDIKTLKECNFSTTNHEFTTVHLSVRVPTSPSDEVKDKFNKKGSACCQI 144
            D   TD  +   A + S C +RFL+VNG  FR+  PA ++I  VKN++I+ +P EL D  + T SP +    KIDDIR+L+LGKFL+D KTL+EC+F   +   TTVH+S++ P+S  +EV+ +  K  S CC +
Sbjct:    7 DVGTTDASAVESADDGSSCFLRFLLVNGNDFRMEFPAKTSIRGVKNSIIKSKPPELVDLAERTHSPAIE---KIDDIRILYLGKFLEDYKTLEECSFGVGSSNSTTVHISLK-PSSSVNEVQKERRKNKSGCCTL 137          
BLAST of Gcaud9204.t1 vs. uniprot
Match: R7QSY1_CHOCR (Rad60-SLD_2 domain-containing protein (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSY1_CHOCR)

HSP 1 Score: 105 bits (262), Expect = 7.290e-25
Identity = 47/82 (57.32%), Postives = 65/82 (79.27%), Query Frame = 0
Query:   65 ELADFLKDTSPG-VNSPTKIDDIRVLHLGKFLDDIKTLKECNFSTTNHEFTTVHLSVRVPTSPSDEVKDKFNKKGSACCQII 145
            EL  FLK+++P  ++ P K ++IR+LHLGKFLDD KTL+EC F++     TTVH+S+RVPT  S++VK+K NKKGSACC+I+
Sbjct:   95 ELVAFLKESNPNAISGPAKTEEIRILHLGKFLDDAKTLQECKFASGPDNLTTVHISLRVPTKASEDVKEKINKKGSACCEIM 176          
BLAST of Gcaud9204.t1 vs. uniprot
Match: A0A7S2ZMW3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMW3_9RHOD)

HSP 1 Score: 87.8 bits (216), Expect = 6.350e-19
Identity = 46/103 (44.66%), Postives = 69/103 (66.99%), Query Frame = 0
Query:   43 LSVPASSTILNVKNAVIQQRPKELADFLKDT-SPGVNSPTKIDDIRVLHLGKFLDDIKTLKECNFSTTNHEFTTVHLSVRVPTSPSDEVKDKFNKKGSACCQI 144
            +  PA ++I  VKNA+I+ +P+EL D  + T SP +    KIDDIR+L+LGKFL+D KTL+EC+    +   TTVH+S++ P+   +EV+ +  KK S CC +
Sbjct:    1 MEFPARTSIRGVKNAIIKSKPQELVDLAEKTHSPALE---KIDDIRILYLGKFLEDYKTLEECSLGIGSSNSTTVHISLK-PSLSVNEVQKERRKKKSGCCTL 99          
BLAST of Gcaud9204.t1 vs. uniprot
Match: A0A7S1ERV6_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERV6_9RHOD)

HSP 1 Score: 79.3 bits (194), Expect = 3.350e-15
Identity = 48/122 (39.34%), Postives = 69/122 (56.56%), Query Frame = 0
Query:   25 NHSMCDIRFLMVNGTSFRLSVPASSTILNVKNAVIQQRPKELADFLKDTSPGVNSPTKIDDIRVLHLGKFLDDIKTLKECNFSTTNHEFTTVHLSVRVPTSPSDEVKDKFNKKG--SACCQI 144
            N   C IRFL+ N TSF        TI  VK +++  +P EL + L+++S     P+ + ++R+L LG+FL+D KTL ECN S    + TTVHLSV+  TS   E     N+K   + CC +
Sbjct:   27 NMQSCKIRFLLPNDTSFTRDFEPQFTIARVKQSLLDDKPPELVEQLENSSQVY--PSSVTELRILLLGRFLEDSKTLTECNVSLD--DVTTVHLSVKSITS---EDPSSTNRKSHPTGCCAV 141          
BLAST of Gcaud9204.t1 vs. uniprot
Match: A0A1X6NKE9_PORUM (Rad60-SLD_2 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKE9_PORUM)

HSP 1 Score: 81.6 bits (200), Expect = 4.150e-15
Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 0
Query:   28 MCDIRFLMVNGTSFRLSVPASSTILNVKNAVIQQRPKELADFLKDTS-PGVNSPTKIDDIRVLHLGKFLDDIKTLKECNFSTTNHE-------FTTVHLSVRVPTSPSDEVKDKFNKKGSACCQII 145
            +C +RFL+ N T FR+S P  +TI ++K  +I Q P +++DFL+ +  P V S    +++R+LHLGKFLDD + L + +F+   +         T VHL  +   + ++E K++  K    CC ++
Sbjct:  129 LCTLRFLLANSTEFRISAPPETTIRDIKTQIITQHPPQVSDFLRASQLPPVVST---EEMRILHLGKFLDDPRKLADYSFAVGGNAPGDPTDGVTAVHLLCKPLKAAAEEAKERPPKGPGCCCSLM 251          
BLAST of Gcaud9204.t1 vs. uniprot
Match: A0A5J4Z2D5_PORPP (Ubiquitin-like domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2D5_PORPP)

HSP 1 Score: 74.3 bits (181), Expect = 2.970e-13
Identity = 43/124 (34.68%), Postives = 64/124 (51.61%), Query Frame = 0
Query:   23 AVNHSMCDIRFLMVNGTSFRLSVPASSTILNVKNAVIQQRPKELADFLKDTSPGVNSPTKIDDIRVLHLGKFLDDIKTLKECNFSTTNHEFTTVHLSVRVPTSPSDEVKDKFNKKGSACCQIIA 146
            A    MC +R L+VN + F++    +ST+  +K  ++ QRP +L + L+ T      P    +IR+L LGKFL D  TL  C F     E TTVH S++     + +V  K   K  A C +I+
Sbjct:   30 AAGEDMCVVRVLLVNESHFQVESAPTSTVRELKERILAQRPAQLVELLQKTEQPF--PESTAEIRLLMLGKFLVDTDTLHSCGFKVGPGEQTTVHCSIK----SAAQVHAKSKPKDQAACCVIS 147          
BLAST of Gcaud9204.t1 vs. uniprot
Match: M2XVT2_GALSU (Ubiquitin-like domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XVT2_GALSU)

HSP 1 Score: 70.5 bits (171), Expect = 8.370e-12
Identity = 38/118 (32.20%), Postives = 66/118 (55.93%), Query Frame = 0
Query:   28 MCDIRFLMVNGTSFRLSVPASSTILNVKNAVIQQRPKELADFLKDTSPGVNSPTKIDDIRVLHLGKFLDDIKTLKECNFSTTNHEFTTVHLSVRVPTSPSDEVKDKFNKKGSACCQII 145
            +C IRFL+++G  FR++ P ++T+L +K  V++ RP+    FL+     + SP    DIR+ + GK +++ KTL++   S    E +T+H  VR+ T    + +    KK  AC   +
Sbjct:   32 VCTIRFLLLDGNDFRVAFPPNTTVLQLKERVLEDRPQAFLSFLEHNR--LPSPLYPSDIRLFYFGKDMEEEKTLQDYGISP--QEVSTIHFVVRMRTHQVVQSEKDEVKKQRACASCV 145          
BLAST of Gcaud9204.t1 vs. uniprot
Match: A0A1Y2DBU4_9FUNG (Ubiquitin-like domain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2DBU4_9FUNG)

HSP 1 Score: 60.5 bits (145), Expect = 4.810e-8
Identity = 40/119 (33.61%), Postives = 62/119 (52.10%), Query Frame = 0
Query:   30 DIRFLMVNGTSFRLSVPASSTILNVKNAVIQQRPKELADFLKDTSPGVNSPTKIDDIRVLHLGKFLDDIKTLKECNFSTTNHEFTTVHLSVRVPTSPSDEV--KDKFNKKGSACCQIIA 146
            ++R L  NGT   + + +S TILN+K  ++   PKE  D +         PT I++I++LH GK+L+D  TL E N      + T VHL ++      DE   +D      ++CC II+
Sbjct:   44 NVRLLRPNGTRTDVLLESSDTILNLKQQILDTWPKEWTDEV---------PTTINNIKILHYGKYLEDESTL-EANKLPVG-QTTIVHLIIKFSKKELDEKDKEDDVKPANASCCCIIS 151          
BLAST of Gcaud9204.t1 vs. uniprot
Match: A0A2T9YLG8_9FUNG (Ubiquitin-like domain-containing protein n=2 Tax=Harpellales TaxID=61421 RepID=A0A2T9YLG8_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 8.170e-8
Identity = 41/122 (33.61%), Postives = 60/122 (49.18%), Query Frame = 0
Query:   24 VNHSMCDIRFLMVNGTSFRLSVPASSTILNVKNAVIQQRPKELADFLKDTSPGVNSPTKIDDIRVLHLGKFLDDIKTLKECNFSTTNHEFTTVHLSVRVPTSPSDEVKDKFNKKGSACCQII 145
            ++ +  DI FL+V+G    L+   +  I ++K  V +  PKE              P  ++ IR+L+LGKFLDD  TLK+  FS+ N   T +HL VR P +   E K K        C I+
Sbjct:   22 ISSTSIDITFLVVSGLRKTLTFQLTDRISSIKKFVFENWPKEFEI----------PPENLNQIRLLYLGKFLDDDTTLKDSKFSSNN---TIIHLIVR-PYTTFKEDKKKTEDAPKCTCIIL 129          
The following BLAST results are available for this feature:
BLAST of Gcaud9204.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3J6V0_9FLOR1.230e-7478.08Membrane-anchored ubiquitin-fold protein 1 n=1 Tax... [more]
A0A7S0BLQ6_9RHOD7.480e-2844.44Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
R7QSY1_CHOCR7.290e-2557.32Rad60-SLD_2 domain-containing protein (Fragment) n... [more]
A0A7S2ZMW3_9RHOD6.350e-1944.66Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1ERV6_9RHOD3.350e-1539.34Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6NKE9_PORUM4.150e-1534.13Rad60-SLD_2 domain-containing protein n=1 Tax=Porp... [more]
A0A5J4Z2D5_PORPP2.970e-1334.68Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
M2XVT2_GALSU8.370e-1232.20Ubiquitin-like domain-containing protein n=1 Tax=G... [more]
A0A1Y2DBU4_9FUNG4.810e-833.61Ubiquitin-like domain-containing protein n=1 Tax=N... [more]
A0A2T9YLG8_9FUNG8.170e-833.61Ubiquitin-like domain-containing protein n=2 Tax=H... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039540UBL3-like, ubiquitin domainPFAMPF13881Rad60-SLD_2coord: 29..142
e-value: 5.4E-12
score: 45.8
IPR007918Mitochondrial distribution/morphology family 35/apoptosisPFAMPF05254UPF0203coord: 184..217
e-value: 1.4E-4
score: 22.0
NoneNo IPR availableGENE3D3.10.20.90coord: 15..126
e-value: 2.3E-21
score: 77.6
NoneNo IPR availablePANTHERPTHR13169:SF0UBIQUITIN-LIKE PROTEIN 3coord: 26..144
IPR040015UBL3-likePANTHERPTHR13169UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEINcoord: 26..144
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 27..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_551_length_22383_cov_4.305805contigNODE_551_length_22383_cov_4.305805:168..2270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9204.t1Gcaud9204.t1Gracilaria caudata M_176_S67 malemRNANODE_551_length_22383_cov_4.305805 168..2270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9204.t1 ID=Gcaud9204.t1|Name=Gcaud9204.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=225bp
MDVDKTALSQTDTALTDLDSSPAVNHSMCDIRFLMVNGTSFRLSVPASST
ILNVKNAVIQQRPKELADFLKDTSPGVNSPTKIDDIRVLHLGKFLDDIKT
LKECNFSTTNHEFTTVHLSVRVPTSPSDEVKDKFNKKGSACCQIIASPAG
CSQLHKMPTLFPEVLQHMEEHHSCLISSRRPAFWYKTKFLKGNLEPSSEC
EEKFEELQVCINVALEQARQPGNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039540UBL3-like_ubiquitin_dom
IPR007918MDM35_apoptosis
IPR040015UBL3-like
IPR029071Ubiquitin-like_domsf