Gcaud9199.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9199.t1
Unique NameGcaud9199.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length202
Homology
BLAST of Gcaud9199.t1 vs. uniprot
Match: A0A2V3IJP3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJP3_9FLOR)

HSP 1 Score: 249 bits (636), Expect = 1.770e-81
Identity = 124/160 (77.50%), Postives = 138/160 (86.25%), Query Frame = 0
Query:   41 LRVTPRAELRLQPGIPSGQDPQENTPLRYYKPRPVETYEDRSFATVLPRNWAGEGSSVGAADIEPITKEDIEKRRQVEVTSESTSAFLEYSMMVKEEREKALEEQKRRSTLGKTGRATCGEEEGKAFVSNYQTILVEGVKAVEYWGVPNGPVPRLFGGPG 200
            +R   RA+L L+PGIPSGQDPQEN P+RYY PRP E Y++R FATVLPRNW GE SS+GAADI P+TKE IE+ R+V+VT  STSAFLEYS MVKE+REKAL  QK RS + KTGRATCGEEEGKAFVSNYQT+LVEGVKAVEYWGVPNGPVPRLFGGPG
Sbjct:   33 IRFITRADLNLKPGIPSGQDPQENAPIRYYVPRPKENYDNRGFATVLPRNWEGEVSSIGAADITPVTKESIEESRKVKVTPASTSAFLEYSQMVKEDREKALAIQKDRSEIEKTGRATCGEEEGKAFVSNYQTVLVEGVKAVEYWGVPNGPVPRLFGGPG 192          
BLAST of Gcaud9199.t1 vs. uniprot
Match: A0A291FEB1_GRIPA (LRC4 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEB1_GRIPA)

HSP 1 Score: 213 bits (542), Expect = 3.300e-67
Identity = 105/161 (65.22%), Postives = 129/161 (80.12%), Query Frame = 0
Query:   41 LRVTPRAELRLQP-GIPSGQDPQENTPLRYYKPRPVETYEDRSFATVLPRNWAGEGSSVGAADIEPITKEDIEKRRQVEVTSESTSAFLEYSMMVKEEREKALEEQKRRSTLGKTGRATCGEEEGKAFVSNYQTILVEGVKAVEYWGVPNGPVPRLFGGPG 200
            L +TPRA+  L P GIPSGQDP +N PLR+Y PRPVETYEDR FAT+LPR W GE +++GA DIEP+TKE++E+ R+V V + ST AF+EY+ M+KEER +AL +Q RR++   +GR TCGE EG  FVSN + ILV+GVK VEYWGVPNGPVPRLFGGPG
Sbjct:   31 LTLTPRAQADLPPPGIPSGQDPLDNAPLRHYVPRPVETYEDRGFATILPRTWEGETNTIGAGDIEPVTKEEVEESRKVPVDAASTGAFVEYARMMKEERAQALADQARRNSAPTSGRPTCGETEGTEFVSNARPILVDGVKVVEYWGVPNGPVPRLFGGPG 191          
BLAST of Gcaud9199.t1 vs. uniprot
Match: A0A1X6NL72_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL72_PORUM)

HSP 1 Score: 162 bits (409), Expect = 4.050e-47
Identity = 86/170 (50.59%), Postives = 114/170 (67.06%), Query Frame = 0
Query:   33 AANSLLQRLRVTPRAELRLQPGIPSGQDPQENTPLRYYKPRPVETYEDRSFATVLPRNWAGEGSSVGAADIEPITKEDIEKRRQVEVTSESTSAFLEYSMMVKEEREKALEEQKRRSTLGKTGRATCGEEEGKAFVSNYQTILVEGVKAVEYWGVPN-GPVPRLFGGPGA 201
            AA S  +    +    ++ +PG+P G+D +EN PLRYY P PVETYE RSFATVLP+ W GE  ++GA D+  +T+E I + + V +++ ST+AFLEY+ MVK ER+ AL      S   +TGRATCG+ EG+ +VSN   +LVEGVK +EYWG  N   VPR FGGP A
Sbjct:   18 AAASRTRPAASSAATRMQTRPGLPPGEDARENAPLRYYVPVPVETYEKRSFATVLPKTWEGEVVTIGAPDVPELTEESIAESKLVPLSASSTAAFLEYNAMVKAERKAALAAFAAGSETEQTGRATCGDSEGREYVSNANPLLVEGVKCIEYWGRTNPAAVPRAFGGPTA 187          
BLAST of Gcaud9199.t1 vs. uniprot
Match: A0A7S0T6I9_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6I9_9RHOD)

HSP 1 Score: 112 bits (281), Expect = 2.130e-28
Identity = 67/142 (47.18%), Postives = 83/142 (58.45%), Query Frame = 0
Query:   44 TPRAELRLQPGIPSGQDPQENTPLRYYKPRPVETYEDRSFATVLPRNWAGEGSSVGAADIEPITKEDIEKRRQVEVTSESTSAFLEYSMMVKEEREKALEEQKRRSTLGKTGRATCGEEEGKAFVSNYQTILVEGVKAVEYW 185
            TP    +L PG+PSGQD ++N PLR Y P PVETYE RSFATVLP+ W GE  +VG AD      E +E+   V  T+ESTSAF+EY+  +K+ERE AL              A   E +G  + SN+  I  EGVK  E W
Sbjct:   17 TPAVCRKLVPGVPSGQDVRDNQPLRSYVPAPVETYEKRSFATVLPKTWEGEVPTVGVAD----APEAVEEDWLVPETAESTSAFVEYARKMKDEREAALA-------------AKLSEADGDLYPSNFAAIKYEGVKCFESW 141          
The following BLAST results are available for this feature:
BLAST of Gcaud9199.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IJP3_9FLOR1.770e-8177.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A291FEB1_GRIPA3.300e-6765.22LRC4 n=1 Tax=Griffithsia pacifica TaxID=35689 RepI... [more]
A0A1X6NL72_PORUM4.050e-4750.59Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0T6I9_9RHOD2.130e-2847.18Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_418_length_26174_cov_4.620136contigNODE_418_length_26174_cov_4.620136:15075..16435 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9199.t1Gcaud9199.t1Gracilaria caudata M_176_S67 malemRNANODE_418_length_26174_cov_4.620136 15075..16435 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9199.t1 ID=Gcaud9199.t1|Name=Gcaud9199.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=202bp
LEATCAERSDLDAYHFIRRAKSVPNVRKTEVEAANSLLQRLRVTPRAELR
LQPGIPSGQDPQENTPLRYYKPRPVETYEDRSFATVLPRNWAGEGSSVGA
ADIEPITKEDIEKRRQVEVTSESTSAFLEYSMMVKEEREKALEEQKRRST
LGKTGRATCGEEEGKAFVSNYQTILVEGVKAVEYWGVPNGPVPRLFGGPG
A*
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